Benjamin D. Humphreys
Active 1994–2025
- 134
- Papers
- 23,267
- Citations
- 83
- h-index
- 128
- i10-index
Citations
Citation sources
Countries
Institutions
- Harvard University1.4%
- Brigham and Women's Hospital0.9%
- Inserm0.7%
- Washington University in St. Louis0.7%
- University of Washington0.6%
- University of Pennsylvania0.5%
- Other95.2%
Fields
- Medicine51.8%
- Biochemistry, Genetics and Molecular Biology38.5%
- Immunology and Microbiology4.6%
- Neuroscience1.7%
- Engineering1.3%
- Environmental Science0.5%
- Other1.6%
Topics
- Chronic Kidney Disease and Diabetes5.9%
- Renal and related cancers4.9%
- Acute Kidney Injury Research3.6%
- Single-cell and spatial transcriptomics3%
- Renal Diseases and Glomerulopathies2.1%
- Mesenchymal stem cell research1.8%
- Other78.7%
Coauthors
- Hao Wu36
- Parker C. Wilson16
- Yoshiharu Muto14
- Rafael Kramann13
- Yuhei Kirita13
- Joseph V. Bonventre12
- Sushrut S. Waikar12
- Andrew P. McMahon11
- Yasuhiro Yoshimura10
- Nicolas Ledru9
- Helmut G. Rennke8
- Tetsuro Kusaba8
- Derek P. DiRocco7
- Eryn E. Dixon7
- George Dubyak7
- Jeremy S. Duffield7
- Kohei Uchimura7
- Rebekka K. Schneider7
- Monica Chang-Panesso6
- Akio Kobayashi5
- Andrew F. Malone5
- Haikuo Li5
- Ivica Grgic5
- M. Todd Valerius5
All papers
- Mechanisms of Renal Fibrosis
Authors: Benjamin D. Humphreys - Annual Review of Physiology 2017 cited by 1,239
- Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney
Authors: Yoshiharu Muto, Parker C. Wilson, Nicolas Ledru, Hao Wu, Henrik Dimke, Sushrut S. Waikar, Benjamin D. Humphreys - Nature Communications 2021 cited by 478
- Advantages of Single-Nucleus over Single-Cell RNA Sequencing of Adult Kidney: Rare Cell Types and Novel Cell States Revealed in Fibrosis
Authors: Hao Wu, Yuhei Kirita, Erinn L. Donnelly, Benjamin D. Humphreys - Journal of the American Society of Nephrology 2018 cited by 795
- The single-cell transcriptomic landscape of early human diabetic nephropathy
Authors: Parker C. Wilson, Hao Wu, Yuhei Kirita, Kohei Uchimura, Nicolas Ledru, Helmut G. Rennke, Paul A. Welling, Sushrut S. Waikar, Benjamin D. Humphreys - National Academy of Sciences, Proceedings of the National Academy of Sciences 2019 cited by 544
- Mapping the single-cell transcriptomic response of murine diabetic kidney disease to therapies
Authors: Hao Wu, Romer Gonzalez Villalobos, Xiang Yao, Dermot F. Reilly, Tao Chen, Matthew M. Rankin, Eugene Myshkin, Matthew D. Breyer, Benjamin D. Humphreys - Cell Metabolism 2022 cited by 243
- Comparative Analysis and Refinement of Human PSC-Derived Kidney Organoid Differentiation with Single-Cell Transcriptomics
Authors: Hao Wu, Kohei Uchimura, Erinn L. Donnelly, Yuhei Kirita, Samantha A. Morris, Benjamin D. Humphreys - Cell stem cell 2018 cited by 630
- Comprehensive single-cell transcriptional profiling defines shared and unique epithelial injury responses during kidney fibrosis
Authors: Haikuo Li, Eryn E. Dixon, Hao Wu, Benjamin D. Humphreys - Cell Metabolism 2022 cited by 193
- Perivascular Gli1+ Progenitors Are Key Contributors to Injury-Induced Organ Fibrosis
Authors: Rafael Kramann, Rebekka K. Schneider, Derek P. DiRocco, Flávia G. Machado, Susanne Fleig, Philip A. Bondzie, Joel Henderson, Benjamin L. Ebert, Benjamin D. Humphreys - Cell stem cell 2014 cited by 936
- Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression
Authors: Parker C. Wilson, Yoshiharu Muto, Hao Wu, Anil Karihaloo, Sushrut S. Waikar, Benjamin D. Humphreys - Nature Communications 2022 cited by 190
- Multi-omics integration in the age of million single-cell data
Authors: Zhen Miao, Benjamin D. Humphreys, Andrew P. McMahon, Junhyong Kim - Nature Reviews Nephrology 2021 cited by 259
- Fate Tracing Reveals the Pericyte and Not Epithelial Origin of Myofibroblasts in Kidney Fibrosis
Authors: Benjamin D. Humphreys, Shuei‐Liong Lin, Akio Kobayashi, Thomas E. Hudson, Brian T. Nowlin, Joseph V. Bonventre, M. Todd Valerius, Andrew P. McMahon, Jeremy S. Duffield - American Journal Of Pathology 2009 cited by 1,414
- Parallel k-means Algorithm on a Cyclic Network
Authors: Elie El Agha, Rafael Kramann, Rebekka K. Schneider, Xiaokun Li, Werner Seeger, Benjamin D. Humphreys, Savério Bellusci - Cell stem cell 2007 cited by 449
- Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response
Authors: Hao Wu, Andrew F. Malone, Erinn L. Donnelly, Yuhei Kirita, Kohei Uchimura, Sai Mukund Ramakrishnan, Joseph P. Gaut, Benjamin D. Humphreys - Journal of the American Society of Nephrology 2018 cited by 416
- Kidney injury molecule–1 is a phosphatidylserine receptor that confers a phagocytic phenotype on epithelial cells
Authors: Takaharu Ichimura, Edwin J.P. van Asseldonk, Benjamin D. Humphreys, Lakshman Gunaratnam, Jeremy S. Duffield, Joseph V. Bonventre - Journal of Clinical Investigation 2008 cited by 763
- Lineage Tracing and Single-Nucleus Multiomics Reveal Novel Features of Adaptive and Maladaptive Repair after Acute Kidney Injury
Authors: Louisa M.S. Gerhardt, Kari Koppitch, Jordi van Gestel, Jinjin Guo, Sam Cho, Hao Wu, Yuhei Kirita, Benjamin D. Humphreys, Andrew P. McMahon - Journal of the American Society of Nephrology 2023 cited by 107
- Defining cellular complexity in human autosomal dominant polycystic kidney disease by multimodal single cell analysis
Authors: Yoshiharu Muto, Eryn E. Dixon, Yasuhiro Yoshimura, Hao Wu, Kohei Omachi, Nicolas Ledru, Parker C. Wilson, Andrew J. King, N. Eric Olson, Marvin Gunawan, Jay J. Kuo, Jennifer H. Cox, Jeffrey H. Miner, Stephen L. Seliger, Owen M. Woodward, Paul A. Welling, Terry Watnick, Benjamin D. Humphreys - Nature Communications 2022 cited by 105
- Intrinsic Epithelial Cells Repair the Kidney after Injury
Authors: Benjamin D. Humphreys, M. Todd Valerius, Akio Kobayashi, Joshua W. Mugford, Savuth Soeung, Jeremy S. Duffield, Andrew P. McMahon, Joseph V. Bonventre - Cell stem cell 2008 cited by 867
- Differentiated kidney epithelial cells repair injured proximal tubule
Authors: Tetsuro Kusaba, Matthew A. Lalli, Rafael Kramann, Akio Kobayashi, Benjamin D. Humphreys - National Academy of Sciences, Proceedings of the National Academy of Sciences 2013 cited by 485
- Spatially Resolved Transcriptomic Analysis of Acute Kidney Injury in a Female Murine Model
Authors: Eryn E. Dixon, Hao Wu, Yoshiharu Muto, Parker C. Wilson, Benjamin D. Humphreys - Journal of the American Society of Nephrology 2021 cited by 125
- Targeted proximal tubule injury triggers interstitial fibrosis and glomerulosclerosis
Authors: Ivica Grgic, Gabriela Campanholle, Vanesa Bijol, Changjiang Wang, Venkata Sabbisetti, Takaharu Ichimura, Benjamin D. Humphreys, Joseph V. Bonventre - Kidney International 2012 cited by 472
- Gli1+ Mesenchymal Stromal Cells Are a Key Driver of Bone Marrow Fibrosis and an Important Cellular Therapeutic Target
Authors: Rebekka K. Schneider, Ann Mullally, Aurélien Dugourd, Fabian Peisker, Remco M. Hoogenboezem, Paulina M. H. van Strien, Eric M. Bindels, Dirk Heckl, Guntram Büsche, David Fleck, Gerhard Müller‐Newen, Janewit Wongboonsin, Mónica Ventura Ferreira, Victor G. Puelles, Julio Sáez-Rodríguez, Benjamin L. Ebert, Benjamin D. Humphreys, Rafael Kramann - Cell stem cell 2017 cited by 264
- Transcriptomic, epigenomic, and spatial metabolomic cell profiling redefines regional human kidney anatomy
Authors: Haikuo Li, Dian Li, Nicolas Ledru, Qiao Xuanyuan, Hao Wu, Amish Asthana, Lori N. Byers, Stefan G. Tullius, Giuseppe Orlando, Sushrut S. Waikar, Benjamin D. Humphreys - Cell Metabolism 2024 cited by 82
- Chemokine Receptor 2–targeted Molecular Imaging in Pulmonary Fibrosis. A Clinical Trial
Authors: Steven L. Brody, Sean P. Gunsten, Hannah Luehmann, Debbie Sultan, Michelle Hoelscher, Gyu Seong Heo, Jiehong Pan, Jeffrey R. Koenitzer, Ethan C. Lee, Tao Huang, Cedric Mpoy, Shuchi Guo, Richard Laforest, Amber Salter, Tonya Russell, Adrian Shifren, Christophe Combadière, Kory J. Lavine, Daniel Kreisel, Benjamin D. Humphreys, Buck E. Rogers, David S. Gierada, Derek E. Byers, Robert J. Gropler, Delphine L. Chen, Jeffrey J. Atkinson, Yongjian Liu - American Journal of Respiratory and Critical Care Medicine 2020 cited by 114
- Tubular Epithelial Cell HMGB1 Promotes AKI-CKD Transition by Sensitizing Cycling Tubular Cells to Oxidative Stress: A Rationale for Targeting HMGB1 during AKI Recovery
Authors: Zhi Zhao, Julian A. Marschner, Takamasa Iwakura, Chenyu Li, Manga Motrapu, Meisi Kuang, Bastian Popper, Andreas Linkermann, Jan Klocke, Philipp Enghard, Yoshiharu Muto, Benjamin D. Humphreys, Helena Erlandsson Harris, Paola Romagnani, Hans‐Joachim Anders - Journal of the American Society of Nephrology 2023 cited by 84
