Edward C. Uberbacher
Active 1991–2016
- 34
- Papers
- 27,651
- Citations
- 19
- h-index
- 23
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology62.4%
- Agricultural and Biological Sciences14.7%
- Medicine8%
- Computer Science3.6%
- Immunology and Microbiology2.1%
- Environmental Science1.9%
- Other7.3%
Topics
- Genomics and Phylogenetic Studies8.4%
- Chromosomal and Genetic Variations7.4%
- RNA and protein synthesis mechanisms7.1%
- RNA modifications and cancer3.4%
- CRISPR and Genetic Engineering3.4%
- Genomics and Chromatin Dynamics3.2%
- Other67.1%
Coauthors
- Ying Xu17
- Richard J. Mural11
- Michael R. Leuze4
- Xiaojun Guan4
- Dong Xu3
- J. Ralph Einstein3
- Philip F. LoCascio3
- Tatiana V. Karpinets3
- Aristides Patrinos2
- Byung-Hoon Park2
- Carl Edward Oliver2
- David Thomassen2
- Doug Hyatt2
- Gary Johnson2
- Loren J. Hauser2
- Manesh J. Shah2
- Marvin Frazier2
- Mustafa H. Syed2
- Nagiza F. Samatova2
- Richard Mural2
- Sherri Matis2
- Victor Olman2
- Andrew Heaford1
- Andrew Sheridan1
All papers
- Initial sequencing and analysis of the human genome
Authors: Eric S. Lander, Lauren Linton, Bruce W. Birren, Chad Nusbaum, Michael C. Zody, Jennifer Baldwin, Keri Devon, Ken Dewar, Michael P. Doyle, William W. Fitzhugh, Roel Funke, Diane Gage, Katrina L. Harris, Andrew Heaford, John G. Howland, Lisa Kann, Jessica A. Lehoczky, R Paul Levine, Paul McEwan, Kevin McKernan, James C. Meldrim, Jill P. Mesirov, Cher Miranda, William Morris, Jerome W. Naylor, Christina Raymond, Mark Rosetti, Ralph Santos, Andrew Sheridan, Carrie Sougnez, Nicole Stange-Thomann, Nikola M. Stojanović, Aravind Subramanian, Dudley Wyman, Jane Rogers, John Sulston, R. Ainscough, Stephan Beck, David Bentley, John H. Burton, Christopher Clee, Nigel Carter, Alan Coulson, Rebecca Deadman, Panos Deloukas, Andrew Dunham, Ian Dunham, Richard Durbin, Lisa French, Darren Grafham, Simon G. Gregory, Tim Hubbard, Sean Humphray, Adrienne Hunt, Matthew C. Jones, Christine Lloyd, Amanda A. McMurray, Lucy Matthews, Simon Mercer, Sarah Milne, James C. Mullikin, Andrew J. Mungall, R. W. Plumb, Mark T. Ross, R. Shownkeen, Sarah Sims, R Waterston, Richard K. Wilson, LaDeana W. Hillier, John D. McPherson, Marco A. Marra, Elaine R. Mardis, Lucinda A. Fulton, Asif Chinwalla, Kymberlie Pepin, Warren Gish, Stephanie L. Chissoe, Michael C. Wendl, Kim D. Delehaunty, Tracie L. Miner, Andrew Delehaunty, Jason Kramer, Lisa L. Cook, Robert S. Fulton, D. Johnson, Patrick Minx, Sandra W. Clifton, Trevor Hawkins, Elbert Branscomb, Paul Predki, Paul Richardson, Sarah Wenning, Tom Slezak, Norman A. Doggett, Jan‐Fang Cheng, Anne S. Olsen, Susan Lucas, Christopher J. Elkin, Edward C. Uberbacher, M.E. Frazier and 152 more - Nature 2001 cited by 24,710
- Gene and translation initiation site prediction in metagenomic sequences
Authors: Doug Hyatt, Philip F. LoCascio, Loren J. Hauser, Edward C. Uberbacher - Bioinformatics, Bioinform. 2012 cited by 668
- MicroRNAs Form Triplexes with Double Stranded DNA at Sequence-Specific Binding Sites; a Eukaryotic Mechanism via which microRNAs Could Directly Alter Gene Expression
Authors: Steven W. Paugh, David R. Coss, Ju Bao, Lucas T. Laudermilk, Christy R. Grace, Antonio M. Ferreira, M. Brett Waddell, Granger Ridout, Deanna Naeve, Michael R. Leuze, Philip F. LoCascio, John C. Panetta, Mark R. Wilkinson, Ching-Hon Pui, Clayton W. Naeve, Edward C. Uberbacher, Erik J. Bonten, William E. Evans - PLoS Computational Biology, PLoS Comput. Biol. 2016 cited by 90
- CAZymes Analysis Toolkit (CAT): Web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database
Authors: Byung H. Park, Tatiana V. Karpinets, Mustafa Syed, Michael R. Leuze, Edward C. Uberbacher - Glycobiology 2010 cited by 310
- Detecting Differential and Correlated Protein Expression in Label-Free Shotgun Proteomics
Authors: Bing Zhang, Nathan C. VerBerkmoes, Michael A. Langston, Edward C. Uberbacher, Robert L. Hettich, Nagiza F. Samatova - Journal of Proteome Research 2006 cited by 392
- 2D image segmentation using minimum spanning trees
Authors: Ying Xu, Edward C. Uberbacher - Image and Vision Computing, Image Vis. Comput. 1997 cited by 96
- A segmentation algorithm for noisy images: Design and evaluation
Authors: Ying Xu, Victor Olman, Edward C. Uberbacher - Pattern Recognition Letters, Pattern Recognit. Lett. 1998 cited by 29
- Locating protein-coding regions in human DNA sequences by a multiple sensor-neural network approach.
Authors: Edward C. Uberbacher, Richard Mural - National Academy of Sciences, Proceedings of the National Academy of Sciences 1991 cited by 658
- [16] Discovering and understanding genes in human DNA sequence using GRAIL
Authors: Edward C. Uberbacher, Ying Xu, Richard Mural - Methods in enzymology on CD-ROM/Methods in enzymology 1996 cited by 134
- Automated Gene Identification in Large-Scale Genomic Sequences
Authors: Ying Xu, Edward C. Uberbacher - Journal of Computational Biology, J. Comput. Biol. 1997 cited by 99
- An Efficient Computational Method for Globally Optimal Threading
Authors: Ying Xu, Dong Xu, Edward C. Uberbacher - Journal of Computational Biology, J. Comput. Biol. 1998 cited by 84
- GRAIL: a multi-agent neural network system for gene identification
Authors: Ying Xu, Richard J. Mural, J. Ralph Einstein, Manesh B. Shah, Edward C. Uberbacher - IEEE, Proc. IEEE 1996 cited by 65
- Constructing gene models from accurately predicted exons: an application of dynamic programming
Authors: Ying Xu, Richard J. Mural, Edward C. Uberbacher - Computer applications in the biosciences, Comput. Appl. Biosci. 1994 cited by 65
- Alignments of DNA and protein sequences containing frameshift errors
Authors: Xiaojun Guan, Edward C. Uberbacher - Computer applications in the biosciences, Comput. Appl. Biosci. 1996 cited by 43
- Detection of RNA Polymerase II Promoters and Polyadenylation Sites in Human DNA Sequence
Authors: Sherri Matis, Ying Xu, Manesh J. Shah, Xiaojun Guan, J. Ralph Einstein, Richard J. Mural, Edward C. Uberbacher - Computers & Chemistry, Comput. Chem. 1996 cited by 33
- Gene Prediction by Pattern Recognition and Homology Search
Authors: Ying Xu, Edward C. Uberbacher - ISMB 1996 cited by 22
- Predicting Protein Folding Classes without Overly Relying on Homology
Authors: Mark Craven, Richard J. Mural, Loren J. Hauser, Edward C. Uberbacher - ISMB 1995 cited by 21
- Correcting sequencing errors in DNA coding regions using a dynamic programming approach
Authors: Ying Xu, Richard J. Mural, Edward C. Uberbacher - Computer applications in the biosciences, Comput. Appl. Biosci. 1994 cited by 21
- Background rareness-based iterative multiple sequence alignment algorithm for regulatory element detection
Authors: Chandrasegaran Narasimhan, Philip F. LoCascio, Edward C. Uberbacher - Bioinformatics, Bioinform. 2003 cited by 20
- Inferring Gene Structures in Genomic Sequences Using Pattern Recognition and Expressed Sequence Tags
Authors: Ying Xu, Richard J. Mural, Edward C. Uberbacher - ISMB 1997 cited by 16
- Shewanella knowledgebase: integration of the experimental data and computational predictions suggests a biological role for transcription of intergenic regions
Authors: Tatiana V. Karpinets, Margaret F. Romine, Denise Schmoyer, Guruprasad Kora, Mustafa H. Syed, Michael R. Leuze, Margrethe H. Serres, Byung-Hoon Park, Nagiza F. Samatova, Edward C. Uberbacher - Database, Database J. Biol. Databases Curation 2010 cited by 15
- Use of Neural Networks for Prediction of Graft Failure following Liver Transplantation
Authors: Sherri Matis, Howard Doyle, Ignazio Marino, Richard J. Mural, Edward C. Uberbacher - Proceedings Eighth IEEE Symposium on Computer-Based Medical Systems, CBMS 1995 cited by 15
- A polynomial-time algorithm for a class of protein threading problems
Authors: Ying Xu, Edward C. Uberbacher - Computer applications in the biosciences, Comput. Appl. Biosci. 1996 cited by 12
- Sequence-structure specificity of a knowledge based energy function at the secondary structure level
Authors: Dong Xu, Michael A. Unseren, Ying Xu, Edward C. Uberbacher - Bioinformatics, Bioinform. 2000 cited by 7
