James R. Brown
Active 1955–2025
- 88
- Papers
- 22,855
- Citations
- 66
- h-index
- 79
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology44.6%
- Medicine22.6%
- Agricultural and Biological Sciences6.4%
- Environmental Science5.4%
- Business, Management and Accounting5.3%
- Immunology and Microbiology3.4%
- Other12.3%
Topics
- Gut microbiota and health9.8%
- Genomics and Phylogenetic Studies4%
- Microbial Community Ecology and Physiology2.3%
- Computational Drug Discovery Methods1.9%
- RNA and protein synthesis mechanisms1.8%
- Diet and metabolism studies1.6%
- Other78.6%
Coauthors
- Zhang Wang9
- Stephanie Van Horn8
- Bahrad A. Sokhansanj7
- Karen Ingraham7
- Bruce E. Miller6
- David Holmes6
- Ruth Tal‐Singer6
- Alison F. Chalker5
- Christopher E. Brightling5
- Gail Rosen5
- Kristin K. Koretke5
- Vinod Kumar5
- W. Ford Doolittle5
- Andrei N. Lupas4
- Andrew T. Beckenbach4
- Dave Singh4
- David Mayhew4
- Michael J. Smith4
- Michael J. Stanhope4
- Aaron Spivak3
- Alexander P. Bryant3
- Chi So3
- E. S. Thomas3
- Ganesh M. Sathe3
All papers
- PICRUSt2 for prediction of metagenome functions
Authors: Gavin M. Douglas, Vincent J. Maffei, Jesse Zaneveld, Svetlana N. Yurgel, James R. Brown, Christopher M. Taylor, Curtis Huttenhower, Morgan G. I. Langille - Nature Biotechnology 2020 cited by 6,537
- Inflammatory Endotype–associated Airway Microbiome in Chronic Obstructive Pulmonary Disease Clinical Stability and Exacerbations: A Multicohort Longitudinal Analysis
Authors: Zhang Wang, Nicholas Locantore, Koirobi Haldar, Mohammadali Yavari Ramsheh, Augusta Beech, Wei Ma, James R. Brown, Ruth Tal‐Singer, Michael R. Barer, Mona Bafadhel, Gavin C. Donaldson, Jadwiga A. Wedzicha, Dave Singh, Tom Wilkinson, Bruce E. Miller, Christopher E. Brightling - American Journal of Respiratory and Critical Care Medicine 2020 cited by 293
- Lung microbiome dynamics in COPD exacerbations
Authors: Zhang Wang, Mona Bafadhel, Koirobi Haldar, Aaron Spivak, David Mayhew, Bruce E. Miller, Ruth Tal‐Singer, Sebastian L. Johnston, Mohammadali Yavari Ramsheh, Michael R. Barer, Christopher E. Brightling, James R. Brown - European Respiratory Journal 2016 cited by 479
- Obesity and disease severity magnify disturbed microbiome-immune interactions in asthma patients
Authors: David Michalovich, Noelia Rodríguez‐Pérez, Sylwia Smolińska, M Pirozyński, David Mayhew, Sorif Uddin, Stephanie Van Horn, Milena Sokołowska, Can Altunbulakli, Andrzej Eljaszewicz, Benoı̂t Pugin, Weronika Barcik, Magdalena Kurnik‐Łucka, Ken Saunders, Karen D. Simpson, Peter Schmid‐Grendelmeier, Ruth Ferstl, Remo Frei, Noriane A. Sievi, Malcolm Kohler, Paweł Gajdanowicz, Katrine Graversen, Katrine Lindholm Bøgh, Marek Jutel, James R. Brown, Cezmi A. Akdiş, Edith M. Hessel, Liam O’Mahony - Nature Communications 2019 cited by 215
- PICRUSt2: An improved and customizable approach for metagenome inference
Authors: Gavin M. Douglas, Vincent J. Maffei, Jesse Zaneveld, Svetlana N. Yurgel, James R. Brown, Christopher M. Taylor, Curtis Huttenhower, Morgan G. I. Langille - 2019 cited by 736
- Thousands of chemical starting points for antimalarial lead identification
Authors: Francisco‐Javier Gamo, Laura M. Sanz, Jaume Vidal, Cristina de Cózar, Emilio Fernández Álvarez, José-Luis Lavandera, Dana E. Vanderwall, Darren V. S. Green, Vinod Kumar, Samiul Hasan, James R. Brown, Catherine E. Peishoff, Lon R. Cardon, José Garcia-Bustos - Nature 2010 cited by 1,019
- Longitudinal profiling of the lung microbiome in the AERIS study demonstrates repeatability of bacterial and eosinophilic COPD exacerbations
Authors: David Mayhew, Nathalie Devos, Christophe Lambert, James R. Brown, Stuart C. Clarke, Viktoriya L. Kim, Michal Magid-Slav, Bruce E. Miller, Kristoffer Ostridge, Ruchi Patel, Ganesh M. Sathe, Daniel F. Simola, Karl J. Staples, Ruby Sung, Ruth Tal‐Singer, Andrew Tuck, Stephanie Van Horn, Vincent Weynants, Nicholas Williams, Jeanne‐Marie Devaster, Tom Wilkinson - Thorax 2018 cited by 292
- Novel Gut-Based Pharmacology of Metformin in Patients with Type 2 Diabetes Mellitus
Authors: Antonella Napolitano, Sam Miller, Andrew W. Nicholls, David Baker, Stephanie Van Horn, E. S. Thomas, Deepak K. Rajpal, Aaron Spivak, James R. Brown, Derek J. Nunez - PLoS ONE 2014 cited by 287
- Airway host-microbiome interactions in chronic obstructive pulmonary disease
Authors: Zhang Wang, Barbara Maschera, Simon Lea, Umme Kolsum, David Michalovich, Stephanie Van Horn, Christopher Traini, James R. Brown, Edith M. Hessel, Dave Singh - Respiratory Research 2019 cited by 161
- Sputum microbiome temporal variability and dysbiosis in chronic obstructive pulmonary disease exacerbations: an analysis of the COPDMAP study
Authors: Zhang Wang, Richa Singh, Bruce E. Miller, Ruth Tal‐Singer, Stephanie Van Horn, Lynn Tomsho, Alexander Mackay, James P. Allinson, Adam Webb, Anthony J. Brookes, Leena George, Bethan Barker, Umme Kolsum, Louise Donnelly, Kylie Belchamber, Peter J. Barnes, Dave Singh, Christopher E. Brightling, Gavin C. Donaldson, Jadwiga A. Wedzicha, James R. Brown - Thorax 2017 cited by 157
- The sputum microbiome is distinct between COPD and health, independent of smoking history
Authors: Koirobi Haldar, Leena George, Zhang Wang, Vijay Mistry, Mohammadali Yavari Ramsheh, Robert C. Free, Catherine John, Nicola Reeve, Bruce E. Miller, Ruth Tal‐Singer, Adam Webb, Anthony J. Brookes, Martin D. Tobin, Dave Singh, Gavin C. Donaldson, Jadwiga A. Wedzicha, James R. Brown, Michael R. Barer, Christopher E. Brightling - Respiratory Research 2020 cited by 112
- Gut microbiome differences between metformin‐ and liraglutide‐treated T2DM subjects
Authors: Zhang Wang, Somdutta Saha, Stephanie Van Horn, E. S. Thomas, Christopher Traini, Ganesh M. Sathe, Deepak K. Rajpal, James R. Brown - Endocrinology Diabetes & Metabolism 2017 cited by 81
- Multi-omic meta-analysis identifies functional signatures of airway microbiome in chronic obstructive pulmonary disease
Authors: Zhang Wang, Yuqiong Yang, Zhengzheng Yan, Haiyue Liu, Boxuan Chen, Zhenyu Liang, Fengyan Wang, Bruce E. Miller, Ruth Tal‐Singer, Xinzhu Yi, Jintian Li, Martin R. Stämpfli, Hongwei Zhou, Christopher E. Brightling, James R. Brown, Martin Wu, Rongchang Chen, Wensheng Shu - The ISME Journal 2020 cited by 90
- Photon quantum entanglement in the MeV regime and its application in PET imaging
Authors: D. P. Watts, Julien Bordes, James R. Brown, Alexander Cherlin, R. W. Newton, John E. Allison, M. Bashkanov, Nikos Efthimiou, N. Zachariou - Nature Communications 2021 cited by 74
- New Compound Sets Identified from High Throughput Phenotypic Screening Against Three Kinetoplastid Parasites: An Open Resource
Authors: Imanol Peña, Marlene Manzano, Juan Cantizani, Albane Kessler, Julio Alonso-Padilla, Ana I. Bardera, Emilio Fernández Álvarez, Gonzalo Colmenarejo, Ignacio Cotillo, Irene Roquero, Francisco de Dios-Anton, Vanessa Barroso, Ana Rodrı́guez, David W. Gray, Miguel Navarro, Vinod Kumar, Alexander Sherstnev, David H. Drewry, James R. Brown, José M. Fiandor, J.J. Martin - Scientific Reports 2015 cited by 258
- Bacterial Resistance to Leucyl-tRNA Synthetase Inhibitor GSK2251052 Develops during Treatment of Complicated Urinary Tract Infections
Authors: Karen O’Dwyer, Aaron Spivak, Karen Ingraham, Sharon Min, David Holmes, Charles Jakielaszek, Stephen Rittenhouse, Alan L. Kwan, George P. Livi, Ganesh M. Sathe, E. S. Thomas, Stephanie Van Horn, Linda A. Miller, Monique Twynholm, John Tomayko, Marybeth Dalessandro, Madelyn M. Caltabiano, Nicole E. Scangarella-Oman, James R. Brown - Antimicrobial Agents and Chemotherapy 2014 cited by 98
- Tempo, mode, the progenote, and the universal root.
Authors: W. Ford Doolittle, James R. Brown - National Academy of Sciences, Proceedings of the National Academy of Sciences 1994 cited by 204
- Evolution of Two-Component Signal Transduction
Authors: Kristin K. Koretke, Andrei N. Lupas, Patrick V. Warren, Martin Rosenberg, James R. Brown - Molecular Biology and Evolution 2000 cited by 323
- Comparative Genomics of Klebsiella pneumoniae Strains with Different Antibiotic Resistance Profiles
Authors: Vinod Kumar, Peng Sun, Jessica Vamathevan, Yong Li, Karen Ingraham, Leslie M. Palmer, Jianzhong Huang, James R. Brown - Antimicrobial Agents and Chemotherapy 2011 cited by 110
- Does Transparency Stifle or Facilitate Innovation?
Authors: James R. Brown, Gustav Martinsson - Management Science, Manag. Sci. 2018 cited by 189
- T Cell– and Monocyte-Specific RNA-Sequencing Analysis in Septic and Nonseptic Critically Ill Patients and in Patients with Cancer
Authors: Michael L. Washburn, Zhang Wang, Andrew H. Walton, S. Peter Goedegebuure, David J. Figueroa, Stephanie Van Horn, Julie Grossman, Katja Remlinger, Heather B. Madsen, James R. Brown, Roopa Srinivasan, Amaya I. Wolf, Scott B. Berger, Victoria N. Yi, William G. Hawkins, Ryan C. Fields, Richard S. Hotchkiss - The Journal of Immunology 2019 cited by 63
- Evolutionary relationships of Aurora kinases: Implications for model organism studies and the development of anti-cancer drugs
Authors: James R. Brown, Kristin K. Koretke, Marian L. Birkeland, Philippe Sanséau, Denis R. Patrick - BMC Evolutionary Biology 2004 cited by 121
- Identification of Common Biological Pathways and Drug Targets Across Multiple Respiratory Viruses Based on Human Host Gene Expression Analysis
Authors: Steven B. Smith, William Dampier, Aydın Tözeren, James R. Brown, Michal Magid-Slav - PLoS ONE 2012 cited by 91
- Expanding the drug discovery space with predicted metabolite–target interactions
Authors: Andrea Nuzzo, Somdutta Saha, Ellen L. Berg, Channa Jayawickreme, Joel Tocker, James R. Brown - Communications Biology 2021 cited by 22
