Javed Siddiqui
Active 1988–2025
- 82
- Papers
- 24,589
- Citations
- 66
- h-index
- 81
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Medicine50.2%
- Biochemistry, Genetics and Molecular Biology43%
- Immunology and Microbiology2.9%
- Chemistry0.8%
- Computer Science0.7%
- Neuroscience0.5%
- Other1.9%
Topics
- Prostate Cancer Treatment and Research9.6%
- Cancer Genomics and Diagnostics4.4%
- Prostate Cancer Diagnosis and Treatment4.3%
- Cancer-related molecular mechanisms research4.1%
- RNA modifications and cancer2.8%
- Epigenetics and DNA Methylation2.2%
- Other72.6%
Coauthors
- Arul M. Chinnaiyan44
- Scott A. Tomlins31
- Xuhong Cao25
- Lakshmi P. Kunju23
- Rohit Mehra23
- Robert J. Lonigro21
- Nallasivam Palanisamy18
- John T. Wei16
- Dan R. Robinson14
- Yi-Mi Wu14
- Felix Y. Feng12
- Kenneth J. Pienta12
- Saravana M. Dhanasekaran12
- Irfan A. Asangani9
- Matthew K. Iyer9
- Xiaojun Jing9
- Daniel G. Remick8
- Fengyun Su8
- Ganesh S. Palapattu8
- Pankaj Vats8
- Rui Wang8
- Bushra Ateeq7
- Daniel H. Hovelson7
- Shanker Kalyana‐Sundaram7
All papers
- Integrative Clinical Genomics of Advanced Prostate Cancer
Authors: Dan R. Robinson, Eliezer M. Van Allen, Yi-Mi Wu, Nikolaus Schultz, Robert J. Lonigro, Juan Miguel Mosquera, Bruce Montgomery, Mary-Ellen Taplin, Colin C. Pritchard, Gerhardt Attard, Himisha Beltran, Wassim Abida, Robert K. Bradley, Jake Vinson, Xuhong Cao, Pankaj Vats, Lakshmi P. Kunju, Maha Hussain, Felix Y. Feng, Scott A. Tomlins, Kathleen A. Cooney, David C. Smith, Christine Brennan, Javed Siddiqui, Rohit Mehra, Yu Chen, Dana E. Rathkopf, Michael J. Morris, Stephen B. Solomon, Jeremy C. Durack, Victor E. Reuter, Anuradha Gopalan, Jianjiong Gao, Massimo Loda, Rosina T. Lis, Michaela Bowden, Stephen Balk, Glenn C. Gaviola, Carrie Sougnez, Manaswi Gupta, Evan Y. Yu, Elahe A. Mostaghel, Heather H. Cheng, Hyojeong Mulcahy, Lawrence D. True, Stephen R. Plymate, Heidi Dvinge, Roberta Ferraldeschi, Penny Flohr, Susana Miranda, Zafeiris Zafeiriou, Nina Tunariu, Joaquı́n Mateo, Raquel Pérez-López, Francesca Demichelis, Brian D. Robinson, Marc Schiffman, David M. Nanus, Scott T. Tagawa, Alexandros Sigaras, Kenneth Eng, Olivier Elemento, Andrea Sboner, Elisabeth I. Heath, Howard I. Scher, Kenneth J. Pienta, Philip W. Kantoff, Johann S. de Bono, Mark A. Rubin, Peter S. Nelson, Levi A. Garraway, Charles L. Sawyers, Arul M. Chinnaiyan - Cell 2015 cited by 3,701
- The mutational landscape of lethal castration-resistant prostate cancer
Authors: Catherine S. Grasso, Yi-Mi Wu, Dan R. Robinson, Xuhong Cao, Saravana M. Dhanasekaran, Amjad Khan, Michael J. Quist, Xiaojun Jing, Robert J. Lonigro, J. Chad Brenner, Irfan A. Asangani, Bushra Ateeq, Sang Y. Chun, Javed Siddiqui, Lee Sam, Matt Anstett, Rohit Mehra, John R. Prensner, Nallasivam Palanisamy, Gregory Ryslik, Fabio Vandin, Benjamin J. Raphael, Lakshmi P. Kunju, Daniel R. Rhodes, Kenneth J. Pienta, Arul M. Chinnaiyan, Scott A. Tomlins - Nature 2012 cited by 2,607
- Integrative clinical genomics of metastatic cancer
Authors: Dan R. Robinson, Yi-Mi Wu, Robert J. Lonigro, Pankaj Vats, Erin Cobain, Jessica Everett, Xuhong Cao, Erica Rabban, Chandan Kumar-Sinha, Victoria Raymond, Scott Schuetze, Ajjai Alva, Javed Siddiqui, Rashmi Chugh, Francis Worden, Mark M. Zalupski, Jeffrey W. Innis, Rajen J. Mody, Scott A. Tomlins, David Lucas, Laurence H. Baker, Nithya Ramnath, Ann F. Schott, Daniel F. Hayes, Joseph Vijai, Kenneth Offit, Elena M. Stoffel, J. Scott Roberts, David C. Smith, Lakshmi P. Kunju, Moshe Talpaz, Marcin Cieslik, Arul M. Chinnaiyan - Nature, Nat. 2017 cited by 938
- Activating ESR1 mutations in hormone-resistant metastatic breast cancer
Authors: Dan R. Robinson, Yi-Mi Wu, Pankaj Vats, Fengyun Su, Robert J. Lonigro, Xuhong Cao, Shanker Kalyana‐Sundaram, Rui Wang, Ning Yu, Lynda Hodges, Amy Gursky, Javed Siddiqui, Scott A. Tomlins, Sameek Roychowdhury, Kenneth J. Pienta, Scott Y. H. Kim, Jens Rueter, James M. Rae, Catherine Van Poznak, Daniel F. Hayes, Rashmi Chugh, Lakshmi P. Kunju, Moshe Talpaz, Anne F. Schott, Arul M. Chinnaiyan - Nature Genetics 2013 cited by 1,158
- Integrative Clinical Genomics of Advanced Prostate Cancer
Authors: Dan R. Robinson, Eliezer M. Van Allen, Yi‐Mi Wu, Nikolaus Schultz, Robert J. Lonigro, Juan‐Miguel Mosquera, Bruce Montgomery, Mary‐Ellen Taplin, Colin C. Pritchard, Gerhardt Attard, Himisha Beltran, Wassim Abida, Robert K. Bradley, Jake Vinson, Xuhong Cao, Pankaj Vats, Lakshmi P. Kunju, Maha Hussain, Felix Y. Feng, Scott A. Tomlins, Kathleen A. Cooney, David C. Smith, Christine Brennan, Javed Siddiqui, Rohit Mehra, Yu Chen, Dana E. Rathkopf, Michael J. Morris, Stephen B. Solomon, Jeremy C. Durack, Victor E. Reuter, Anuradha Gopalan, Jianjiong Gao, Massimo Loda, Rosina T. Lis, Michaela Bowden, Stephen Balk, Glenn C. Gaviola, Carrie Sougnez, Manaswi Gupta, Evan Y. Yu, Elahe A. Mostaghel, Heather H. Cheng, Hyojeong Mulcahy, Lawrence D. True, Stephen R. Plymate, Heidi Dvinge, Roberta Ferraldeschi, Penny Flohr, Susana Miranda, Zafeiris Zafeiriou, Nina Tunariu, Joaquı́n Mateo, Raquel Pérez-López, Francesca Demichelis, Brian D. Robinson, Andrea Sboner, Marc Schiffman, David M. Nanus, Scott T. Tagawa, Alexandros Sigaras, Kenneth Eng, Olivier Elemento, Andrea Sboner, Elisabeth I. Heath, Howard I. Scher, Kenneth J. Pienta, Philip W. Kantoff, Johann S. de Bono, Mark A. Rubin, Peter S. Nelson, Levi A. Garraway, Charles L. Sawyers, Arul M. Chinnaiyan - Cell 2015 cited by 591
- Identification of Targetable FGFR Gene Fusions in Diverse Cancers
Authors: Yi-Mi Wu, Fengyun Su, Shanker Kalyana‐Sundaram, Nickolay A. Khazanov, Bushra Ateeq, Xuhong Cao, Robert J. Lonigro, Pankaj Vats, Rui Wang, Su‐Fang Lin, Ann‐Joy Cheng, Lakshmi P. Kunju, Javed Siddiqui, Scott A. Tomlins, Peter Wyngaard, Seth Sadis, Sameek Roychowdhury, Maha Hussain, Felix Y. Feng, Mark M. Zalupski, Moshe Talpaz, Kenneth J. Pienta, Daniel R. Rhodes, Dan R. Robinson, Arul M. Chinnaiyan - Cancer Discovery 2013 cited by 738
- Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression
Authors: John R. Prensner, Matthew K. Iyer, O. Alejandro Balbin, Saravana M. Dhanasekaran, Qi Cao, J. Chad Brenner, Bharathi Laxman, Irfan A. Asangani, Catherine S. Grasso, Hal D. Kominsky, Xuhong Cao, Xiaojun Jing, Xiaoju Wang, Javed Siddiqui, John T. Wei, Daniel Robinson, Hari Iyer, Nallasivam Palanisamy, Christopher A. Maher, Arul M. Chinnaiyan - Nature Biotechnology 2011 cited by 1,035
- Autophagy inhibition by targeting PIKfyve potentiates response to immune checkpoint blockade in prostate cancer
Authors: Yuanyuan Qiao, Jae Eun Choi, Jean C. Tien, Stephanie A. Simko, Thekkelnaycke M. Rajendiran, Josh N. Vo, Andrew Delekta, Lisha Wang, Lanbo Xiao, Nathan Hodge, Parth Desai, Sergio Mendoza, Kristin Juckette, Alice Xu, Tanu Soni, Fengyun Su, Rui Wang, Xuhong Cao, Jiali Yu, Ilona Kryczek, Xiao Ming Wang, Xiaoju Wang, Javed Siddiqui, Zhen Wang, Amélie Bernard, Ester Fernández‐Salas, Nora M. Navone, Stephanie J. Ellison, Ke Ding, Eeva‐Liisa Eskelinen, Elisabeth I. Heath, Daniel J. Klionsky, Weiping Zou, Arul M. Chinnaiyan - Nature Cancer 2021 cited by 104
- The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex
Authors: John R. Prensner, Matthew K. Iyer, Anirban Sahu, Irfan A. Asangani, Qi Cao, Lalit R. Patel, Ismael A. Vergara, Elai Davicioni, Nicholas Erho, Mercedeh Ghadessi, Robert B. Jenkins, Timothy J. Triche, Rohit Malik, Rachel Bedenis, Natalie McGregor, Teng Ma, Wei Chen, Sumin Han, Xiaojun Jing, Xuhong Cao, Xiaoju Wang, Benjamin C. Chandler, Wei Yan, Javed Siddiqui, Lakshmi P. Kunju, Saravana M. Dhanasekaran, Kenneth J. Pienta, Felix Y. Feng, Arul M. Chinnaiyan - Nature Genetics 2013 cited by 683
- CDK7 Inhibition Suppresses Castration-Resistant Prostate Cancer through MED1 Inactivation
Authors: Reyaz ur Rasool, Ramakrishnan Natesan, Qu Deng, Shweta Aras, Priti Lal, Samuel Sander Effron, Erick Mitchell-Velasquez, Jessica M. Posimo, Shannon Carskadon, Sylvan C. Baca, Mark M. Pomerantz, Javed Siddiqui, Lauren E. Schwartz, Daniel J. Lee, Nallasivam Palanisamy, Goutham Narla, Robert B. Den, Matthew L. Freedman, Donita C. Brady, Irfan A. Asangani - Cancer Discovery 2019 cited by 132
- Identification of recurrent NAB2-STAT6 gene fusions in solitary fibrous tumor by integrative sequencing
Authors: Dan R. Robinson, Yi-Mi Wu, Shanker Kalyana‐Sundaram, Xuhong Cao, Robert J. Lonigro, Yun Shao Sung, Chun‐Liang Chen, Lei Zhang, Rui Wang, Fengyun Su, Matthew K. Iyer, Sameek Roychowdhury, Javed Siddiqui, Kenneth J. Pienta, Lakshmi P. Kunju, Moshe Talpaz, Juan Miguel Mosquera, Samuel Singer, Scott M. Schuetze, Cristina R. Antonescu, Arul M. Chinnaiyan - Nature Genetics 2013 cited by 819
- Urine TMPRSS2:ERG Plus PCA3 for Individualized Prostate Cancer Risk Assessment
Authors: Scott A. Tomlins, John Day, Robert J. Lonigro, Daniel H. Hovelson, Javed Siddiqui, Lakshmi P. Kunju, Rodney L. Dunn, Sarah Meyer, Petrea Hodge, Jack Groskopf, John T. Wei, Arul M. Chinnaiyan - European Urology 2015 cited by 394
- Association Between Combined TMPRSS2:ERG and PCA3 RNA Urinary Testing and Detection of Aggressive Prostate Cancer
Authors: Martin G. Sanda, Ziding Feng, David H. Howard, Scott A. Tomlins, Lori J. Sokoll, Daniel W. Chan, Meredith M. Regan, Jack Groskopf, Jonathan Chipman, Dattatraya Patil, Simpa S. Salami, Douglas S. Scherr, Jacob Kagan, Sudhir Srivastava, Ian M. Thompson, Javed Siddiqui, Jing Fan, Aron Y. Joon, Leonidas E. Bantis, Mark A. Rubin, Arul M. Chinnayian, John T. Wei, and the EDRN-PCA3 Study Group, Mohamed Bidair, Adam S. Kibel, Daniel Lin, Yair Lotan, Alan W. Partin, Samir S. Taneja - JAMA Oncology 2017 cited by 158
- A Randomized Phase II Study of Androgen Deprivation Therapy with or without Palbociclib in RB-positive Metastatic Hormone-Sensitive Prostate Cancer
Authors: Phillip L. Palmbos, Stephanie Daignault‐Newton, Scott A. Tomlins, Neeraj Agarwal, Przemyslaw Twardowski, Alicia K. Morgans, Wm. Kevin Kelly, Vivek Arora, Emmanuel S. Antonarakis, Javed Siddiqui, Jon A. Jacobson, Matthew S. Davenport, Dan R. Robinson, Arul M. Chinnaiyan, Karen E. Knudsen, Maha Hussain - Clinical Cancer Research 2021 cited by 59
- Circulating Cytokine/Inhibitor Profiles Reshape the Understanding of the SIRS/CARS Continuum in Sepsis and Predict Mortality
Authors: Marcin F. Osuchowski, Kathy Welch, Javed Siddiqui, Daniel G. Remick - The Journal of Immunology 2006 cited by 504
- The Role of Sarcosine Metabolism in Prostate Cancer Progression
Authors: Amjad Khan, Thekkelnaycke M. Rajendiran, Ateeq Bushra, Irfan A. Asangani, Jyoti Athanikar, Anastasia K. Yocum, Rohit Mehra, Javed Siddiqui, Ganesh S. Palapattu, John T. Wei, George Michailidis, Arun Sreekumar, Arul M. Chinnaiyan - Neoplasia 2013 cited by 179
- Next-generation RNA Sequencing–based Biomarker Characterization of Chromophobe Renal Cell Carcinoma and Related Oncocytic Neoplasms
Authors: Stephanie L. Skala, Xiaoming Wang, Yuping Zhang, Rahul Mannan, Lisha Wang, Sathiya Pandi Narayanan, Pankaj Vats, Fengyun Su, Jin Chen, Xuhong Cao, Javed Siddiqui, Pedram Argani, Marcin Cieślik, Thomas J. Giordano, Arul M. Chinnaiyan, Saravana M. Dhanasekaran, Rohit Mehra - European Urology 2020 cited by 93
- Targeting Androgen Receptor and DNA Repair in Metastatic Castration-Resistant Prostate Cancer: Results From NCI 9012
Authors: Maha Hussain, Stephanie Daignault‐Newton, Przemyslaw Twardowski, Costantine Albany, Mark N. Stein, Lakshmi P. Kunju, Javed Siddiqui, Yi-Mi Wu, Dan R. Robinson, Robert J. Lonigro, Xuhong Cao, Scott A. Tomlins, Rohit Mehra, Kathleen A. Cooney, Bruce Montgomery, Emmanuel S. Antonarakis, Daniel H. Shevrin, Paul G. Corn, Young E. Whang, David C. Smith, Megan E.V. Caram, Karen E. Knudsen, Walter M. Stadler, Felix Y. Feng, Arul M. Chinnaiyan - Journal of Clinical Oncology 2017 cited by 210
- Urine TMPRSS2:ERG Fusion Transcript Stratifies Prostate Cancer Risk in Men with Elevated Serum PSA
Authors: Scott A. Tomlins, Sheila M. J. Aubin, Javed Siddiqui, Robert J. Lonigro, Laurie Sefton-Miller, Siobhan Miick, Sarah Williamsen, Petrea Hodge, Jessica Meinke, Amy Blase, Yvonne Penabella, John Day, Radhika Varambally, Bo Han, David P. Wood, Lei Wang, Martin G. Sanda, Mark A. Rubin, Daniel R. Rhodes, Brent K. Hollenbeck, Kyoko Sakamoto, Jonathan Silberstein, Yves Fradet, J. Burns Amberson, Stephanie Meyers, Nallasivam Palanisamy, Harry G. Rittenhouse, John T. Wei, Jack Groskopf, Arul M. Chinnaiyan - Science Translational Medicine 2011 cited by 351
- RNA biomarkers associated with metastatic progression in prostate cancer: a multi-institutional high-throughput analysis of SChLAP1
Authors: John R. Prensner, Shuang G. Zhao, Nicholas Erho, Matthew J. Schipper, Matthew K. Iyer, Saravana M. Dhanasekaran, Cristina Magi‐Galluzzi, Rohit Mehra, Anirban Sahu, Javed Siddiqui, Elai Davicioni, Robert B. Den, Adam P. Dicker, R. Jeffrey Karnes, John T. Wei, Eric A. Klein, Robert B. Jenkins, Arul M. Chinnaiyan, Felix Y. Feng - The Lancet Oncology 2014 cited by 270
- The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing
Authors: Marcin Cieślik, Rashmi Chugh, Yi-Mi Wu, Ming Wu, Christine Brennan, Robert J. Lonigro, Fengyun Su, Rui Wang, Javed Siddiqui, Rohit Mehra, Xuhong Cao, David R. Lucas, Arul M. Chinnaiyan, Dan R. Robinson - Genome Research 2015 cited by 191
- Virus-positive Merkel Cell Carcinoma Is an Independent Prognostic Group with Distinct Predictive Biomarkers
Authors: Kelly L. Harms, Lili Zhao, Bryan Johnson, Xiaoming Wang, Shannon Carskadon, Nallasivam Palanisamy, Daniel R. Rhodes, Rahul Mannan, Josh N. Vo, Jae Eun Choi, May P. Chan, Douglas R. Fullen, Rajiv M. Patel, Javed Siddiqui, T. Vincent, Steven Hrycaj, Scott A. McLean, Tasha M. Hughes, Christopher K. Bichakjian, Scott A. Tomlins, Paul W. Harms - Clinical Cancer Research 2021 cited by 88
- Mechanistic Rationale for Inhibition of Poly(ADP-Ribose) Polymerase in ETS Gene Fusion-Positive Prostate Cancer
Authors: J. Chad Brenner, Bushra Ateeq, Yong Li, Anastasia K. Yocum, Qi Cao, Irfan A. Asangani, Sonam Patel, Xiaoju Wang, Hallie Liang, Jindan Yu, Nallasivam Palanisamy, Javed Siddiqui, Wei Yan, Xuhong Cao, Rohit Mehra, Aaron Sabolch, Venkatesha Basrur, Robert J. Lonigro, Jun Yang, Scott A. Tomlins, Christopher A. Maher, Kojo S.J. Elenitoba‐Johnson, Maha Hussain, Nora M. Navone, Kenneth J. Pienta, Sooryanarayana Varambally, Felix Y. Feng, Arul M. Chinnaiyan - Cancer Cell 2011 cited by 421
- Development and Validation of a Scalable Next-Generation Sequencing System for Assessing Relevant Somatic Variants in Solid Tumors
Authors: Daniel H. Hovelson, Andrew S. McDaniel, Andi K. Cani, Bryan Johnson, Kate Rhodes, Paul D. Williams, Santhoshi Bandla, Geoffrey Bien, Paul Choppa, Fiona Hyland, Rajesh Gottimukkala, Guoying Liu, Manimozhi Manivannan, Jeoffrey Schageman, Efren Ballesteros-Villagrana, Catherine S. Grasso, Michael J. Quist, Venkata Yadati, Anmol M. Amin, Javed Siddiqui, Bryan L. Betz, Karen E. Knudsen, Kathleen A. Cooney, Felix Y. Feng, Michael H. Roh, Peter S. Nelson, Chia‐Jen Liu, David G. Beer, Peter Wyngaard, Arul M. Chinnaiyan, Seth Sadis, Daniel R. Rhodes, Scott A. Tomlins - Neoplasia 2015 cited by 227
