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Jonathan M. Rothberg

Active 1988–2022

31
Papers
27,671
Citations
29
h-index
31
i10-index

Citations

Citations per year for Jonathan M. Rothberg1967: 1 citations1968: 2 citations1972: 1 citations1973: 1 citations1987: 2 citations1989: 6 citations1990: 9 citations1991: 11 citations1992: 15 citations1993: 19 citations1994: 20 citations1995: 15 citations1996: 6 citations1997: 4 citations1998: 12 citations1999: 30 citations2000: 87 citations2001: 167 citations2002: 186 citations2003: 222 citations2004: 293 citations2005: 358 citations2006: 414 citations2007: 515 citations2008: 588 citations2009: 651 citations2010: 648 citations2011: 595 citations2012: 572 citations2013: 460 citations2014: 381 citations2015: 292 citations2016: 251 citations2017: 210 citations2018: 198 citations2019: 354 citations2020: 335 citations2021: 282 citations2022: 237 citations2023: 204 citations2024: 263 citations2025: 152 citations2026: 7 citations1969–1971: no citations, so these years are not shown1974–1986: no citations, so these years are not shown1988: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,950 citing papers, 32.2% of this breakdownUnited Kingdom: 966 citing papers, 7.9% of this breakdownChina: 868 citing papers, 7.1% of this breakdownGermany: 853 citing papers, 6.9% of this breakdownCanada: 537 citing papers, 4.4% of this breakdownFrance: 484 citing papers, 3.9% of this breakdownJapan: 314 citing papers, 2.6% of this breakdownAustralia: 302 citing papers, 2.5% of this breakdownSpain: 301 citing papers, 2.4% of this breakdownItaly: 281 citing papers, 2.3% of this breakdownSweden: 263 citing papers, 2.1% of this breakdownNetherlands: 254 citing papers, 2.1% of this breakdown
0%32.2%Other 23.6%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology62%
  • Medicine11%
  • Agricultural and Biological Sciences5.3%
  • Environmental Science4.5%
  • Engineering4%
  • Neuroscience2.7%
  • Other10.5%

Topics

  • Bioinformatics and Genomic Networks6.7%
  • Genomics and Phylogenetic Studies6.1%
  • RNA and protein synthesis mechanisms2.2%
  • Microbial Metabolic Engineering and Bioproduction2.2%
  • Protein Structure and Dynamics2%
  • Computational Drug Discovery Methods1.8%
  • Other79%

Coauthors

All papers

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  1. Genome sequencing in microfabricated high-density picolitre reactors

    Authors: Marcel Margulies, Michael D. Miller, William E. Altman, Said Attiya, Joel S. Bader, Lisa A. Bemben, Jan Berka, Michael Braverman, Yi‐Ju Chen, Zhoutao Chen, Scott Dewell, Lei Du, Joseph M. Fierro, Xavier V. Gomes, Bailey Godwin, Wen He, Scott Helgesen, Chun He Ho, Gerard P. Irzyk, Szilveszter C. Jando, Maria L. I. Alenquer, Thomas Jarvie, Kshama B. Jirage, Jong‐Bum Kim, James R. Knight, Janna R. Lanza, John H. Leamon, Steven M. Lefkowitz, Ming Lei, Jing Li, Kenton L. Lohman, Hong Lü, Vinod B. Makhijani, Keith E. McDade, Michael P. McKenna, Eugene W. Myers, Elizabeth Nickerson, John R. Nobile, Ramona Plant, Bernard P. Puc, M. T. Ronan, George T. Roth, Gary J. Sarkis, Jan Fredrik Simons, John Simpson, Maithreyan Srinivasan, Karrie Tartaro, Alexander Tomasz, Kari A. Vogt, Greg A. Volkmer, Shally H. Wang, Yong Wang, Michael P. Weiner, Pengguang Yu, R. F. Begley, Jonathan M. Rothberg - Nature 2005 cited by 7,738

  2. Portable, bedside, low-field magnetic resonance imaging for evaluation of intracerebral hemorrhage

    Authors: Mercy H. Mazurek, Bradley A. Cahn, Matthew Ming Fai Yuen, Anjali M. Prabhat, Isha R. Chavva, Jill Shah, Anna Crawford, E. Brian Welch, Jonathan M. Rothberg, Laura Sacolick, Michael Poole, Charles Wira, Charles Matouk, Adrienne Ward, Nona Timario, Audrey C. Leasure, Rachel Beekman, Teng J. Peng, Jens Witsch, Joseph Antonios, Guido J. Falcone, Kevin T. Gobeske, Nils Petersen, Joseph Schindler, Lauren Sansing, Emily J. Gilmore, David Y. Hwang, Jennifer A. Kim, Ajay Malhotra, Gordon Sze, Matthew S. Rosen, W. Taylor Kimberly, Kevin N. Sheth - Nature Communications 2021 cited by 203

  3. Assessment of Brain Injury Using Portable, Low-Field Magnetic Resonance Imaging at the Bedside of Critically Ill Patients

    Authors: Kevin N. Sheth, Mercy H. Mazurek, Matthew Ming Fai Yuen, Bradley A. Cahn, Jill Shah, Adrienne Ward, Jennifer A. Kim, Emily J. Gilmore, Guido J. Falcone, Nils Petersen, Kevin T. Gobeske, Firas Kaddouh, David Y. Hwang, Joseph Schindler, Lauren Sansing, Charles Matouk, Jonathan M. Rothberg, Gordon Sze, Jonathan Siner, Matthew S. Rosen, Serena Spudich, W. Taylor Kimberly - JAMA Neurology 2020 cited by 269

  4. An integrated semiconductor device enabling non-optical genome sequencing

    Authors: Jonathan M. Rothberg, Wolfgang Hinz, Todd M. Rearick, Jonathan H. Schultz, William J. Mileski, M. Smith Davey, John H. Leamon, Kim L. Johnson, Mark J. Milgrew, Matthew Edwards, Jeremy Hoon, Jan Fredrik Simons, David F. Marran, Jason W. Myers, John F. Davidson, Annika Branting, John R. Nobile, Bernard P. Puc, David R. Light, Travis Clark, Martin Huber, Jeffrey T. Branciforte, Isaac B. Stoner, Simon Cawley, M.R. Lyons, Yutao Fu, Nils Homer, Marina Sedova, Xin Miao, Brian D. Reed, Jeffrey Sabina, Erika Feierstein, Michelle Schorn, Mohammad Alanjary, Eileen T. Dimalanta, Devin Dressman, Rachel Kasinskas, Tanya Sokolsky, Jacqueline A. Fidanza, Eugeni Namsaraev, Kevin McKernan, Alan J. Williams, George T. Roth, J.M. Bustillo - Nature 2011 cited by 2,174

  5. Real-time dynamic single-molecule protein sequencing on an integrated semiconductor device

    Authors: Brian D. Reed, Michael J. Meyer, Valentin Abramzon, Omer Ad, Omer Ad, Pat Adcock, Faisal R. Ahmad, Gün Alppay, James A. Ball, James H. Beach, Dominique Belhachemi, Anthony Bellofiore, Michael Bellos, Juan Felipe Beltrán, A.K. Betts, Mohammad Wadud Bhuiya, Kristin Blacklock, Robert E. Boer, D.C. Boisvert, Norman D. Brault, Aaron Buxbaum, Steve Caprio, Changhoon Choi, Thomas D. Christian, Robert Clancy, Joseph H. Clark, Thomas Connolly, Kathren Fink Croce, Richard Cullen, M. Smith Davey, Jack Davidson, Mohamed M. Elshenawy, Michael Ferrigno, Daniel Frier, Saketh Gudipati, Stephanie Hamill, Zhaoyu He, Sharath Hosali, Haidong Huang, Le Huang, Ali Kabiri, Gennadiy Kriger, Brittany Lathrop, An Li, Peter A.C. Lim, Stephen Liu, Feixiang Luo, Caixia Lv, Xiaoxiao Ma, Evan McCormack, Michele Millham, Roger R. Nani, Manjula Pandey, John Parillo, Gayatri Patel, Douglas H. Pike, Kyle Preston, Adeline Pichard-Kostuch, Kyle Rearick, Todd M. Rearick, Marco Ribezzi‐Crivellari, Gerard M. Schmid, Jonathan H. Schultz, Xinghua Shi, Badri Nath Singh, Nikita Srivastava, Shannon F. Stewman, T. R. Thurston, T. R. Thurston, Philip Trioli, Jennifer Tullman, Xin Wang, Yen‐Chih Wang, Eric A. G. Webster, Zhizhuo Zhang, Jorge Zuniga, Smita S. Patel, Andrew D. Griffiths, Antoine M. van Oijen, Michael McKenna, Matthew D. Dyer, Jonathan M. Rothberg - Science 2022 cited by 127

  6. A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae

    Authors: Peter Uetz, Loïc Giot, Gerard Cagney, Traci A. Mansfield, Richard Judson, James Knight, Daniel Lockshon, Vaibhav A. Narayan, Maithreyan Srinivasan, Pascale Pochart, Alia Qureshi-Emili, Ying Li, Bailey Godwin, Diana Conover, Ted Kalbfleisch, Govindan Vijayadamodar, Meijia Yang, Mark Johnston, Stanley Fields, Jonathan M. Rothberg - Nature 2000 cited by 4,745

  7. Identification of apilimod as a first-in-class PIKfyve kinase inhibitor for treatment of B-cell non-Hodgkin lymphoma

    Authors: Sophia Gayle, Sean F. Landrette, Neil Beeharry, Chris Conrad, Marylens Hernandez, Paul Beckett, Shawn M. Ferguson, Talya Mandelkern, Meiling Zheng, Tian Xu, Jonathan M. Rothberg, Henri S. Lichenstein - Blood 2017 cited by 206

  8. Ultrasound-on-chip platform for medical imaging, analysis, and collective intelligence

    Authors: Jonathan M. Rothberg, Tyler S. Ralston, Alex Rothberg, John D. Martin, Jaime Zahorian, Susan A. Alie, Nevada J. Sanchez, Kailiang Chen, Chao Chen, Karl Thiele, D. E. Grosjean, Jungwook Yang, Liewei Bao, Rob Schneider, Sebastian Schaetz, Christophe Meyer, Abraham R. Neben, Bob Ryan, J. R. Petrus, Joe Lutsky, Dan McMahill, Gregory Corteville, Matthew R. Hageman, Larry S. Miller, Keith Fife - National Academy of Sciences, Proceedings of the National Academy of Sciences 2021 cited by 120

  9. The complete genome of an individual by massively parallel DNA sequencing

    Authors: David A. Wheeler, Maithreyan Srinivasan, Michael D. Miller, Yufeng Shen, Lei Chen, Amy L. McGuire, Wen He, Yi‐Ju Chen, Vinod B. Makhijani, George T. Roth, Xavier V. Gomes, Karrie Tartaro, Faheem Niazi, Cynthia Turcotte, Gerard P. Irzyk, James R. Lupski, Craig Chinault, Xingzhi Song, Yue Liu, Ye Yuan, Lynne Nazareth, Xiang Qin, Donna M. Muzny, Marcel Margulies, George M. Weinstock, Richard A. Gibbs, Jonathan M. Rothberg - Nature 2008 cited by 1,843

  10. Droplet microfluidic technology for single-cell high-throughput screening

    Authors: Eric Brouzés, Martina Medkova, Neal Savenelli, Dave Marran, Mariusz Twardowski, J. Brian Hutchison, Jonathan M. Rothberg, Darren R. Link, Norbert Perrimon, Michael L. Samuels - National Academy of Sciences, Proceedings of the National Academy of Sciences 2009 cited by 1,053

  11. Progress in Ion Torrent semiconductor chip based sequencing

    Authors: Barry Merriman, Ion Torrent R D Team, Jonathan M. Rothberg - Electrophoresis 2012 cited by 353

  12. Impaired Mitochondrial Dynamics and Mitophagy in Neuronal Models of Tuberous Sclerosis Complex

    Authors: Darius Ebrahimi‐Fakhari, Afshin Saffari, Lara Wahlster, Alessia Di Nardo, Daria Turner, Tommy L. Lewis, Christopher Conrad, Jonathan M. Rothberg, Jonathan O. Lipton, Stefan Kölker, Georg F. Hoffmann, Min‐Joon Han, Franck Polleux, Mustafa Şahin - Cell Reports 2016 cited by 155

  13. A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing

    Authors: Richard E. Green, Anna‐Sapfo Malaspinas, Johannes Krause, Adrian W. Briggs, Philip L. Johnson, Caroline Uhler, Matthias Meyer, Jeffrey M. Good, Tomislav Maričić, Udo Stenzel, Kay Prüfer, Michael Siebauer, Hernán A. Burbano, M. T. Ronan, Jonathan M. Rothberg, Michael Egholm, Pavao Rudan, Dejana Brajković, Željko Kućan, Ivan Gušić, Mårten Wikström, Liisa Laakkonen, Janet Kelso, Montgomery Slatkin, Svante Pääbo - Cell 2008 cited by 624

  14. Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology

    Authors: Alexander Mellmann, Dag Harmsen, Craig Cummings, Emily B. Zentz, Shana R. Leopold, Alain Rico, Karola Prior, Rafael Szczepanowski, Yongmei Ji, Wenlan Zhang, Stephen F. McLaughlin, John Henkhaus, Benjamin Leopold, Martina Bielaszewska, Rita Prager, Pius Brzoska, Richard Moore, Simone M Guenther, Jonathan M. Rothberg, Helge Karch - PLoS ONE 2011 cited by 771

  15. The development and impact of 454 sequencing

    Authors: Jonathan M. Rothberg, John H. Leamon - Nature Biotechnology 2008 cited by 520

  16. Analysis of one million base pairs of Neanderthal DNA

    Authors: Richard E. Green, Johannes Krause, Susan E. Ptak, Adrian W. Briggs, M. T. Ronan, Jan Fredrik Simons, Lei Du, Michael D. Miller, Jonathan M. Rothberg, Maja Paunović, Svante Pääbo - Nature 2006 cited by 767

  17. A Protein Interaction Map of Drosophila melanogaster

    Authors: Loïc Giot, Joel S. Bader, Cory Brouwer, Arunima Chaudhuri, Baizeng Kuang, Y. Li, Yameng Hao, Clara Ooi, Bailey Godwin, E. Vitols, Govindan Vijayadamodar, Pascale Pochart, H. Machineni, Michael J. Welsh, Yong Kong, B. Zerhusen, Rachel D. Malcolm, Z. Varrone, Andrew J. Collis, M. Minto, Shane C. Burgess, L. Patrice McDaniel, Eric E. Stimpson, Frank Spriggs, Jessica F. Williams, K. Neurath, N. Ioime, Michelle Agee, Edward Z. Voss, Krystyna Furtak, R. Renzulli, N. Aanensen, S. Carrolla, E. Bickelhaupt, Y. Lazovatsky, A. DaSilva, Jiancheng Zhong, Clement A. Stanyon, Russell L. Finley, Kevin P. White, Michael Braverman, Thomas Jarvie, Stephen J. Gold, Martin Leach, James Knight, Richard A. Shimkets, Michael P. McKenna, John Chant, Jonathan M. Rothberg - Science 2003 cited by 2,280

  18. Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing

    Authors: Robert Pinard, Alex de Winter, Gary J. Sarkis, Mark Gerstein, Karrie Tartaro, Ramona Plant, Michael D. Miller, Jonathan M. Rothberg, John H. Leamon - BMC Genomics 2006 cited by 328

  19. Real-time dynamic single-molecule protein sequencing on an integrated semiconductor device

    Authors: Brian D. Reed, Michael J. Meyer, Valentin Abramzon, Omer Ad, Pat Adcock, Faisal Ahmad, Gün Alppay, James A. Ball, James H. Beach, Dominique Belhachemi, Anthony Bellofiore, Michael Bellos, Juan Felipe Beltrán, A.K. Betts, Mohammad Wadud Bhuiya, Kristin Blacklock, Robert E. Boer, D.C. Boisvert, Norman D. Brault, Aaron Buxbaum, Steve Caprio, Changhoon Choi, Thomas D. Christian, Robert Clancy, Joseph H. Clark, Thomas Connolly, Kathren Fink Croce, Richard Cullen, M. Smith Davey, Jack Davidson, Mohamed M. Elshenawy, Michael Ferrigno, Daniel Frier, Saketh Gudipati, Stephanie Hamill, Zhaoyu He, Sharath Hosali, Haidong Huang, Le Huang, Ali Kabiri, Gennadiy Kriger, Brittany Lathrop, Li An, Peter A.C. Lim, Stephen V. Liu, Feixiang Luo, Caixia Lv, Xiaoxiao Ma, Evan McCormack, Michele Millham, Roger R. Nani, Manjula Pandey, John Parillo, Gayatri Patel, Douglas H. Pike, Kyle Preston, Adeline Pichard-Kostuch, Kyle Rearick, Todd M. Rearick, Marco Ribezzi‐Crivellari, Gerard M. Schmid, Jonathan H. Schultz, Xinghua Shi, Badri Nath Singh, Nikita Srivastava, Shannon F. Stewman, T. R. Thurston, Philip Trioli, Jennifer Tullman, Xin Wang, Yen‐Chih Wang, Eric A. G. Webster, Zhizhuo Zhang, Jorge Zuniga, Smita S. Patel, Andrew D. Griffiths, Antoine M. van Oijen, Michael McKenna, Matthew D. Dyer, Jonathan M. Rothberg - 2022 cited by 20

  20. PDGF-D, a new protease-activated growth factor

    Authors: William J. LaRochelle, Michael Jeffers, William F. McDonald, Rajeev A. Chillakuru, Neill A. Giese, Nathalie A. Lokker, Carol M. Sullivan, Ferenc Boldog, Meijia Yang, Corine Vernet, Catherine E Burgess, Elma R. Fernandes, Lisa L. Deegler, Beth Rittman, Juliette Shimkets, Richard A. Shimkets, Jonathan M. Rothberg, Henri S. Lichenstein - Nature Cell Biology 2001 cited by 416

  21. Gaining confidence in high-throughput protein interaction networks

    Authors: Joel S. Bader, Amitabha Chaudhuri, Jonathan M. Rothberg, John Chant - Nature Biotechnology 2003 cited by 469

  22. Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA

    Authors: Mathias Stiller, Richard E. Green, M. T. Ronan, Jan Fredrik Simons, Lei Du, Wen He, M. Egholm, Jonathan M. Rothberg, Susan G. Keates, Nicolai D. Ovodov, Ekaterina Antipina, Gennady F. Baryshnikov, Yaroslav V. Kuzmin, Alexander A. Vasilevski, G. E. Wuenschell, John Termini, Michael Hofreiter, Viviane Jaenicke-Després, Svante Pääbo - National Academy of Sciences, Proceedings of the National Academy of Sciences 2006 cited by 204

  23. LAM-003, a new drug for treatment of tyrosine kinase inhibitor–resistant FLT3-ITD–positive AML

    Authors: Neil Beeharry, Sean F. Landrette, Sophia Gayle, Marylens Hernandez, Jeff E. Grotzke, Peter R. Young, Paul Beckett, Xuan Zhang, Bing Z. Carter, Michael Andreeff, Stephanie Halene, Tian Xu, Jonathan M. Rothberg, Henri S. Lichenstein - Blood Advances 2019 cited by 16

  24. Low-Abundance Drug-Resistant Viral Variants in Chronically HIV-Infected, Antiretroviral Treatment–Naive Patients Significantly Impact Treatment Outcomes

    Authors: Birgitte B. Simen, Jan Fredrik Simons, Katherine Huppler Hullsiek, Richard M. Novak, Rodger D. MacArthur, John D. Baxter, Chunli Huang, Christine K Lubeski, Gregory S. Turenchalk, Michael Braverman, Brian Desany, Jonathan M. Rothberg, Michael Egholm, Michael J. Kozal - The Journal of Infectious Diseases 2009 cited by 394