Karen Clark
Active 1979–2025
- 59
- Papers
- 23,680
- Citations
- 46
- h-index
- 58
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology47.6%
- Medicine21.3%
- Agricultural and Biological Sciences8.8%
- Environmental Science7.5%
- Immunology and Microbiology6.3%
- Computer Science2.1%
- Other6.4%
Topics
- Genomics and Phylogenetic Studies6.6%
- Ubiquitin and proteasome pathways3%
- RNA and protein synthesis mechanisms1.7%
- Immunotherapy and Immune Responses1.6%
- Microbial Community Ecology and Physiology1.6%
- Chromosomal and Genetic Variations1.5%
- Other84%
Coauthors
- Ilene Karsch-Mizrachi10
- Kim D. Pruitt10
- Eric W. Sayers9
- Matthew Loscalzo8
- James Ostell7
- Mark Cavanaugh7
- Daniel M. Green5
- Melissa M. Hudson5
- Avi Kimchi4
- Charles A. Sklar4
- Deo Kumar Srivastava4
- Kirsten K. Ness4
- Leslie L. Robison4
- Matthew J. Krasin4
- Nicole Barnes4
- Wassim Chemaitilly4
- Zhenghong Li4
- Carmen L. Wilson3
- Ching‐Hon Pui3
- Conrad L. Schoch3
- Cristiane Decat Bergerot3
- David J. Lipman3
- David Y. Thomas3
- Dennis A. Benson3
All papers
- Towards complete and error-free genome assemblies of all vertebrate species
Authors: Arang Rhie, Shane McCarthy, Olivier Fédrigo, Joana Damas, Giulio Formenti, Sergey Koren, Marcela Uliano‐Silva, William Chow, Arkarachai Fungtammasan, Juwan Kim, Chul Lee, Byung June Ko, Mark Chaisson, Gregory Gedman, Lindsey Cantin, Françoise Thibaud‐Nissen, Leanne Haggerty, Iliana Bista, Michelle Smith, Bettina Haase, Jacquelyn Mountcastle, Sylke Winkler, Sadye Paez, Jason T. Howard, Sonja C. Vernes, Tanya M. Lama, Frank Grützner, Wesley C. Warren, Christopher N. Balakrishnan, David W. Burt, Julia M. George, Matthew T. Biegler, David Iorns, Andrew Digby, Daryl Eason, Bruce C. Robertson, Taylor Edwards, Mark Wilkinson, George F. Turner, Axel Meyer, Andreas F. Kautt, Paolo Franchini, H. William Detrich, Hannes Svardal, Maximilian Wagner, Gavin J. P. Naylor, Martin Pippel, Milan Malinsky, Mark P. Mooney, Maria Simbirsky, Brett T. Hannigan, Trevor Pesout, Marlys L. Houck, Ann Misuraca, Sarah B. Kingan, Richard Hall, Zev Kronenberg, Ivan Sović, Christopher Dunn, Zemin Ning, Alex Hastie, Joyce Lee, Siddarth Selvaraj, Richard E. Green, Nicholas H. Putnam, Marta Gut, Jay Ghurye, Erik Garrison, Ying Sims, Joanna Collins, Sarah Pelan, James Torrance, Alan Tracey, Jonathan Wood, Robel E. Dagnew, Dengfeng Guan, Sarah E. London, David F. Clayton, Claudio V. Mello, Samantha R. Friedrich, Peter V. Lovell, Ekaterina Osipova, Farooq O. Al-Ajli, Simona Secomandi, Heebal Kim, Constantina Theofanopoulou, Michael Hiller, Yang Zhou, Robert S. Harris, Kateryna D. Makova, Paul Medvedev, Jinna Hoffman, Patrick Masterson, Karen Clark, Fergal J. Martin, Kevin Howe, Paul Flicek, Brian P. Walenz, Woori Kwak, Hiram Clawson and 27 more - Nature 2021 cited by 3,234
- GenBank
Authors: Dennis A. Benson, Mark Cavanaugh, Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers - Nucleic Acids Research, Nucleic Acids Res. 2012 cited by 3,297
- GenBank
Authors: Karen Clark, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell, Eric W. Sayers - Nucleic Acids Research, Nucleic Acids Res. 2015 cited by 1,557
- Database resources of the National Center for Biotechnology Information
Authors: NCBI Resource Coordinators, Richa Agarwala, Tanya Barrett, Jeffrey Beck, D. A. Benson, Colleen J. Bollin, Evan Bolton, Devon Bourexis, J. Rodney Brister, Stephen H. Bryant, Kathi Canese, Mark Cavanaugh, Chad Charowhas, Karen Clark, Ilya Dondoshansky, Michael Feolo, Lawrence Fitzpatrick, Kathryn Funk, Lewis Y. Geer, Viatcheslav Gorelenkov, Alan S. Graeff, Wratko Hlavina, B. Holmes, Mark Johnson, B Kattman, Viatcheslav Khotomlianski, Avi Kimchi, Michael Kimelman, Masato Kimura, Paul Kitts, William Klimke, Alex Kotliarov, Sergey Krasnov, Anatoliy Kuznetsov, Melissa Landrum, David Landsman, Stacy Lathrop, Jennifer M Lee, Carl Leubsdorf, Zhiyong Lu, Thomas Madden, Aron Marchler‐Bauer, Adriana Malheiro, Peter Meric, Ilene Karsch‐Mizrachi, Anatoly Mnev, Terence D. Murphy, Rebecca Orris, James Ostell, Christopher D. O’Sullivan, Vasuki Palanigobu, Anna R. Panchenko, Lon Phan, Borys Pierov, Kim D. Pruitt, Kurt Rodarmer, Eric W Sayers, Valérie Schneider, Conrad L. Schoch, Gregory D. Schuler, Stephen T. Sherry, Karanjit S. Siyan, Alexandra Soboleva, Vladimir Soussov, G. Starchenko, Tatiana Tatusova, Françoise Thibaud‐Nissen, Kamen Todorov, Barton W Trawick, Denis Vakatov, Minghong Ward, Eugene Yaschenko, Aleksandr Zasypkin, Kerry Zbicz - Nucleic Acids Research, Nucleic Acids Res. 2017 cited by 1,639
- GenBank
Authors: Dennis A. Benson, Mark Cavanaugh, Karen Clark, Ilene Karsch-Mizrachi, James Ostell, Kim D. Pruitt, Eric W. Sayers - Nucleic Acids Research, Nucleic Acids Res. 2017 cited by 782
- Rapid and sensitive detection of genome contamination at scale with FCS-GX
Authors: Alexander Astashyn, Eric S. Tvedte, Deacon Sweeney, Victor Sapojnikov, Nathan Bouk, Victor Joukov, Eyal Mozes, Pooja K Strope, Pape M. Sylla, Lukas Wagner, Shelby Bidwell, Larissa C. Brown, Karen Clark, Emily W. Davis, Brian Smith-White, Wratko Hlavina, Kim D. Pruitt, Valérie Schneider, Terence D. Murphy - Genome biology 2024 cited by 405
- GenBank 2024 Update
Authors: Eric W Sayers, Mark Cavanaugh, Karen Clark, Kim D. Pruitt, Stephen T. Sherry, Linda Yankie, Ilene Karsch‐Mizrachi - Nucleic Acids Research 2023 cited by 309
- Using average nucleotide identity to improve taxonomic assignments in prokaryotic genomes at the NCBI
Authors: Stacy Ciufo, Sivakumar Kannan, Shobha Sharma, Azat Badretdin, Karen Clark, Seán Turner, Slava Brover, Conrad L. Schoch, Avi Kimchi, Michael DiCuccio - INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 2018 cited by 522
- GenBank 2023 update
Authors: Eric W. Sayers, Mark Cavanaugh, Karen Clark, Kim D. Pruitt, Stephen T. Sherry, Linda Yankie, Ilene Karsch-Mizrachi - Nucleic Acids Research, Nucleic Acids Res. 2022 cited by 165
- GenBank
Authors: Eric W. Sayers, Mark Cavanaugh, Karen Clark, James Ostell, Kim D. Pruitt, Ilene Karsch-Mizrachi - Nucleic Acids Research, Nucleic Acids Res. 2018 cited by 565
- Inhibitors of the proteasome block the degradation of most cell proteins and the generation of peptides presented on MHC class I molecules
Authors: Kenneth L. Rock, Colette F. Gramm, Lisa Rothstein, Karen Clark, Ross L. Stein, Lawrence R. Dick, Daniel Hwang, Alfred L. Goldberg - Cell 1994 cited by 2,538
- Database resources of the National Center for Biotechnology Information
Authors: Eric W. Sayers, Richa Agarwala, Evan Bolton, J. Rodney Brister, Kathi Canese, Karen Clark, Ryan Connor, Nicolas Fiorini, Kathryn Funk, Timothy Hefferon, J. Bradley Holmes, Sunghwan Kim, Avi Kimchi, Paul A. Kitts, Stacy Lathrop, Zhiyong Lu, Thomas L. Madden, Aron Marchler-Bauer, Lon Phan, Valerie A. Schneider, Conrad L. Schoch, Kim D. Pruitt, James Ostell - Nucleic Acids Research, Nucleic Acids Res. 2018 cited by 596
- High-resolution comparative analysis of great ape genomes
Authors: Zev Kronenberg, Ian T. Fiddes, David Gordon, Shwetha C. Murali, Stuart Cantsilieris, Olivia S. Meyerson, Jason G. Underwood, Bradley J. Nelson, Mark Chaisson, Max L. Dougherty, Katherine M. Munson, Alex Hastie, Mark Diekhans, Fereydoun Hormozdiari, Nicola Lorusso, Kendra Hoekzema, Ruolan Qiu, Karen Clark, Archana N. Raja, AnneMarie E. Welch, Melanie Sorensen, Carl Baker, Robert S. Fulton, Joel Armstrong, Tina A. Graves-Lindsay, Ahmet M. Denli, Emma R. Hoppe, PingHsun Hsieh, C. Hill, Andy Wing Chun Pang, Joyce Lee, Ernest T. Lam, Susan K. Dutcher, Fred H. Gage, Wesley C. Warren, Jay Shendure, David Haussler, Valérie Schneider, Han Cao, Mario Ventura, Richard K. Wilson, Benedict Paten, Alex A. Pollen, Evan E. Eichler - Science 2018 cited by 401
- BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata
Authors: Tanya Barrett, Karen Clark, Robert Gevorgyan, Vyatcheslav Gorelenkov, Eugene Gribov, Ilene Karsch-Mizrachi, Michael Kimelman, Kim D. Pruitt, Sergei Resenchuk, Tatiana A. Tatusova, Eugene Yaschenko, James Ostell - Nucleic Acids Research, Nucleic Acids Res. 2011 cited by 367
- GenBank
Authors: Eric W. Sayers, Mark Cavanaugh, Karen Clark, Kim D. Pruitt, Conrad L. Schoch, Stephen T. Sherry, Ilene Karsch-Mizrachi - Nucleic Acids Research, Nucleic Acids Res. 2020 cited by 313
- Towards complete and error-free genome assemblies of all vertebrate species
Authors: Arang Rhie, Shane McCarthy, Olivier Fédrigo, Joana Damas, Giulio Formenti, Sergey Koren, Marcela Uliano‐Silva, William Chow, Arkarachai Fungtammasan, Gregory Gedman, Lindsey Cantin, Françoise Thibaud‐Nissen, Leanne Haggerty, Chul Lee, Byung June Ko, Juwan Kim, Iliana Bista, Michelle Smith, Bettina Haase, Jacquelyn Mountcastle, Sylke Winkler, Sadye Paez, Jason T. Howard, Sonja C. Vernes, Tanya M. Lama, Frank Grützner, Wesley C. Warren, Christopher N. Balakrishnan, David W. Burt, Julia M. George, Mathew Biegler, David Iorns, Andrew Digby, Daryl Eason, Taylor Edwards, Mark Wilkinson, George F. Turner, Axel Meyer, Andreas F. Kautt, Paolo Franchini, H. William Detrich, Hannes Svardal, Maximilian Wagner, Gavin J. P. Naylor, Martin Pippel, Milan Malinsky, Mark P. Mooney, Maria Simbirsky, Brett T. Hannigan, Trevor Pesout, Marlys L. Houck, Ann Misuraca, Sarah B. Kingan, Richard Hall, Zev Kronenberg, Jonas Korlach, Ivan Sović, Christopher Dunn, Zemin Ning, Alex Hastie, Joyce Lee, Siddarth Selvaraj, Richard E. Green, Nicholas H. Putnam, Jay Ghurye, Erik Garrison, Ying Sims, Joanna Collins, Sarah Pelan, James Torrance, Alan Tracey, Jonathan Wood, Dengfeng Guan, Sarah E. London, David F. Clayton, Claudio V. Mello, Samantha R. Friedrich, Peter V. Lovell, Ekaterina Osipova, Farooq O. Al-Ajli, Simona Secomandi, Heebal Kim, Constantina Theofanopoulou, Yang Zhou, Robert S. Harris, Kateryna D. Makova, Paul Medvedev, Jinna Hoffman, Patrick Masterson, Karen Clark, Fergal J. Martin, Kevin Howe, Paul Flicek, Brian P. Walenz, Woori Kwak, Hiram Clawson, Mark Diekhans, Luis R Nassar, Benedict Paten, R.H. Kraus and 22 more - 2020 cited by 195
- Measurements of Airborne Influenza Virus in Aerosol Particles from Human Coughs
Authors: William G. Lindsley, Françoise M. Blachère, Robert E. Thewlis, Abhishek Vishnu, Kristina A. Davis, Gang Cao, Jan E. Palmer, Karen Clark, Melanie Fisher, Rashida Khakoo, Donald H. Beezhold - PLoS ONE 2010 cited by 447
- Premature Ovarian Insufficiency in Childhood Cancer Survivors: A Report From the St. Jude Lifetime Cohort
Authors: Wassim Chemaitilly, Zhenghong Li, Matthew J. Krasin, Russell J. Brooke, Carmen L. Wilson, Daniel M. Green, James L. Klosky, Nicole Barnes, Karen Clark, Jonathan B. Farr, Israel Fernández‐Pineda, Michael W. Bishop, Monika L. Metzger, Ching‐Hon Pui, Sue C. Kaste, Kirsten K. Ness, Deo Kumar Srivastava, Leslie L. Robison, Melissa M. Hudson, Yutaka Yasui, Charles A. Sklar - The Journal of Clinical Endocrinology & Metabolism 2017 cited by 215
- Effect of Antimicrobial Therapy on Respiratory Hospitalization or Death in Adults With Idiopathic Pulmonary Fibrosis
Authors: Fernando J. Martínez, Eric Yow, Kevin R. Flaherty, Laurie D. Snyder, Michael T. Durheim, Stephen R. Wisniewski, Frank C. Sciurba, Ganesh Raghu, Maria M. Brooks, Dong‐Yun Kim, Daniel F. Dilling, Gerard J. Criner, Hyun Kim, Elizabeth A. Belloli, Anoop M. Nambiar, Mary Beth Scholand, Kevin J. Anstrom, Imre Noth, CleanUP-IPF Investigators of the Pulmonary Trials Cooperative, Rebecca Bascom, Scott Beegle, Nitin Bhatt, Sangeeta Bhorade, Sachin Chaudhary, Daniel A. Culver, Rick Enelow, Leo C. Ginns, Nishant Gupta, Amy Hajari Case, Mark Hamblin, Gary M. Hunninghake, Robert J. Kaner, Christopher S. King, Michelle Kopfinger, Matthew Kottmann, Lisa Lancaster, David J. Lederer, Tracy Luckhardt, Aditi Mathur, Teng Moua, Justin M. Oldham, Rishi Raj, Shelley L. Schmidt, Mary E. Strek, Varsha Taskar, Rade Tomic, Ayodeji Adegunsoye, Kareem Ahmad, Rifat Ahmed, Timothy Albertson, Martha Alemayehu, Theresa Altherr, Maura Alvarez, Sergio Alvarez-Mulett, Michaela R. Anderson, Boleyn R. Andrist, Adeeb Ansari, Abbas Arastu, Shambhu Aryal, Deelan Ayhan, Ken Baker, Misbah Baqir, Edwinia Battle, Stacy Beasley, B. Bemiss, Joanna Beros, Maneesh Bhargava, Jason Biehl, Reba Blissell, Valerie Bloss, Luigi Boccardi, Melissa Boerman, A.M. Bowser, Kelsey Brait, Linda Briggs, Jenna Brinker, Anne Brown, Cameron Brown, Cathy A. Brown, Sean J. Callahan, Jennifer Cannestra, Brenna Cannon, María G. Castro, Atif Choudhury, Sarah Chu, Chelsea Chung, Karen Clark, Michelle Clark, Michele Cohen, Bridget F. Collins, Ashley Collins, Molly Cope, Josefina Corral, Rebecca Cote, A. G. O. Crowther, D. Dacosta, Shannon Daley, Vijaya Dandamudi, Priscilla Dauphin, Lianne De La Cruz and 214 more - JAMA 2021 cited by 78
- Rapid and sensitive detection of genome contamination at scale with FCS-GX
Authors: Alexander Astashyn, Eric S. Tvedte, Deacon Sweeney, Victor Sapojnikov, Nathan Bouk, Victor Joukov, Eyal Mozes, Pooja K Strope, Pape M. Sylla, Lukas Wagner, Shelby Bidwell, Karen Clark, Emily W. Davis, Brian Smith-White, Wratko Hlavina, Kim D. Pruitt, Valérie Schneider, Terence D. Murphy - 2023 cited by 58
- GenBank
Authors: Dennis A. Benson, Ilene Karsch-Mizrachi, Karen Clark, David J. Lipman, James Ostell, Eric W. Sayers - Nucleic Acids Research, Nucleic Acids Res. 2011 cited by 577
- Quantity and Size Distribution of Cough-Generated Aerosol Particles Produced by Influenza Patients During and After Illness
Authors: William G. Lindsley, Terri Pearce, Judith B. Hudnall, Kristina A. Davis, Stephen M. Davis, Melanie Fisher, Rashida Khakoo, Jan E. Palmer, Karen Clark, İsmail Çelik, Christopher C. Coffey, Françoise M. Blachère, Donald H. Beezhold - Journal of Occupational and Environmental Hygiene 2012 cited by 327
- Lack of effect of benralizumab on signs and symptoms of moderate‐to‐severe atopic dermatitis: Results from the phase 2 randomized, double‐blind, placebo‐controlled HILLIER trial
Authors: Emma Guttman‐Yassky, Lila Bahadori, Laura Brooks, Karen Clark, Hanna Grindebacke, Calvin N. Ho, Rohit Katial, Tuyet‐Hang Pham, C. Walton, Catherine Datto, the HILLIER study group - Journal of the European Academy of Dermatology and Venereology 2023 cited by 16
- Mesenchymal stem cell-derived extracellular matrix (mECM): a bioactive and versatile scaffold for musculoskeletal tissue engineering
Authors: Xiurui Zhang, Yuwei Liu, Karen Clark, Anne-Marie Padget, Peter G. Alexander, Jianwu Dai, Weimin Zhu, Hang Lin - Biomedical Materials 2020 cited by 19
