Luonan Chen
Active 1985–2026
- 379
- Papers
- 19,593
- Citations
- 85
- h-index
- 271
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology49.1%
- Computer Science16.9%
- Medicine12%
- Physics and Astronomy6.6%
- Engineering5.8%
- Neuroscience2.9%
- Other6.7%
Topics
- Bioinformatics and Genomic Networks8.1%
- Gene Regulatory Network Analysis5.3%
- Gene expression and cancer classification4.3%
- Single-cell and spatial transcriptomics2.8%
- Computational Drug Discovery Methods2.7%
- Complex Network Analysis Techniques2%
- Other74.8%
Coauthors
- Kazuyuki Aihara74
- Xiang-Sun Zhang48
- Yong Wang43
- Tao Zeng36
- Zhi-Ping Liu27
- Rui Liu26
- Xing-Ming Zhao23
- Xiaoping Liu19
- Rui-Sheng Wang17
- Hongbin Ji15
- Pei Chen14
- Ruiqi Wang14
- Shijie Tang13
- Zhaoyuan Fang13
- Liang Hu12
- Jifan Shi11
- Ling-Yun Wu11
- Meiyi Li11
- Peng Tao11
- Xiangtian Yu11
- Chuanchao Zhang10
- Dong Gao10
- Hao Dai10
- Chunguang Li9
All papers
- Adeno-to-squamous transition drives resistance to KRAS inhibition in LKB1 mutant lung cancer
Authors: Xinyuan Tong, Ayushi S. Patel, Eejung Kim, Hongjun Li, Yueqing Chen, Shuai Li, Shengwu Liu, Julien Dilly, Kevin S. Kapner, Ningxia Zhang, Yun Xue, Laura D. Hover, Suman Mukhopadhyay, Fiona Sherman, Khrystyna Myndzar, Priyanka Sahu, Yijun Gao, Fei Li, Fuming Li, Zhaoyuan Fang, Yujuan Jin, Juntao Gao, Minglei Shi, Satrajit Sinha, Luonan Chen, Yang Chen, Thian Kheoh, Wenjing Yang, Itai Yanai, André L. Moreira, Vamsidhar Velcheti, Benjamin G. Neel, Liang Hu, James G. Christensen, Peter Olson, Dong Gao, Michael Q. Zhang, Andrew J. Aguirre, Kwok‐Kin Wong, Hongbin Ji - Cancer Cell 2024 cited by 115
- Single-cell RNA-sequencing atlas reveals an MDK-dependent immunosuppressive environment in ErbB pathway-mutated gallbladder cancer
Authors: Yijian Zhang, Chunman Zuo, Liguo Liu, Yunping Hu, Bo Ram Yang, Shimei Qiu, Yang Li, Dongyan Cao, Zheng Ju, Jing Ge, Qiu Wang, Ting Wang, Lu Bai, Yang Yang, Guoqiang Li, Ziyu Shao, Yuan Gao, Yongsheng Li, Rui Bian, Huijie Miao, Lin Li, Xuechuan Li, Chengkai Jiang, Siyuan Yan, Ziyi Wang, Zeyu Wang, Xuya Cui, Wen Huang, Dongxi Xiang, Congjun Wang, Qiyun Li, Xiangsong Wu, Wei Gong, Yun Liu, Rong Shao, Fatao Liu, Maolan Li, Luonan Chen, Yingbin Liu - Journal of Hepatology 2021 cited by 207
- Detecting early-warning signals for sudden deterioration of complex diseases by dynamical network biomarkers
Authors: Luonan Chen, Rui Liu, Zhi‐Ping Liu, Meiyi Li, Kazuyuki Aihara - Scientific Reports 2012 cited by 682
- Deep-joint-learning analysis model of single cell transcriptome and open chromatin accessibility data
Authors: Chunman Zuo, Luonan Chen - Briefings in Bioinformatics, Briefings Bioinform. 2020 cited by 149
- A randomized controlled trial for response of microbiome network to exercise and diet intervention in patients with nonalcoholic fatty liver disease
Authors: Runtan Cheng, Lu Wang, Shenglong Le, Yifan Yang, Can Zhao, Xiangqi Zhang, Xin Yang, Ting Xu, Leiting Xu, Petri Wiklund, Jun Ge, Dajiang Lu, Chenhong Zhang, Luonan Chen, Sulin Cheng - Nature Communications 2022 cited by 120
- Therapeutic targeting of the mevalonate–geranylgeranyl diphosphate pathway with statins overcomes chemotherapy resistance in small cell lung cancer
Authors: Chenchen Guo, Ruijie Wan, Yayi He, Shuhai Lin, Jiayu Cao, Ying Qiu, Tengfei Zhang, Qiqi Zhao, Yujia Niu, Yujuan Jin, Hsin‐Yi Huang, Xue Wang, Li Tan, Roman K. Thomas, Hua Zhang, Luonan Chen, Kwok‐Kin Wong, Liang Hu, Hongbin Ji - Nature Cancer 2022 cited by 106
- Deep cross-omics cycle attention model for joint analysis of single-cell multi-omics data
Authors: Chunman Zuo, Hao Dai, Luonan Chen - Bioinformatics, Bioinform. 2021 cited by 92
- Elucidating tumor heterogeneity from spatially resolved transcriptomics data by multi-view graph collaborative learning
Authors: Chunman Zuo, Yijian Zhang, Chen Cao, Jinwang Feng, Mingqi Jiao, Luonan Chen - Nature Communications 2022 cited by 74
- Integrated profiling of human pancreatic cancer organoids reveals chromatin accessibility features associated with drug sensitivity
Authors: Xiaohan Shi, Yunguang Li, Qiuyue Yuan, Shijie Tang, Shiwei Guo, Yehan Zhang, Juan He, Xiaoyu Zhang, Ming Han, Zhuang Liu, Yiqin Zhu, Suizhi Gao, Huan Wang, Xiongfei Xu, Kailian Zheng, Wei Jing, Luonan Chen, Yong Wang, Gang Jin, Dong Gao - Nature Communications 2022 cited by 92
- Personalized characterization of diseases using sample-specific networks
Authors: Xiaoping Liu, Yuetong Wang, Hongbin Ji, Kazuyuki Aihara, Luonan Chen - Nucleic Acids Research 2016 cited by 341
- Single-cell transcriptomics identifies a distinct luminal progenitor cell type in distal prostate invagination tips
Authors: Wangxin Guo, Lin Li, Juan He, Zhuang Liu, Ming Han, Fei Li, Xinyi Xia, Xiaoyu Zhang, Yao Zhu, Wei Yu, Yunguang Li, Rebiguli Aji, Hao Dai, Hui Wei, Chunfeng Li, Yu Chen, Luonan Chen, Dong Gao - Nature Genetics 2020 cited by 151
- Cell-specific network constructed by single-cell RNA sequencing data
Authors: Hao Dai, Lin Li, Tao Zeng, Luonan Chen - Nucleic Acids Research 2019 cited by 202
- STAMarker: determining spatial domain-specific variable genes with saliency maps in deep learning
Authors: Chihao Zhang, Kangning Dong, Kazuyuki Aihara, Luonan Chen, Shihua Zhang - Nucleic Acids Research 2023 cited by 47
- Autoreservoir computing for multistep ahead prediction based on the spatiotemporal information transformation
Authors: Pei Chen, Rui Liu, Kazuyuki Aihara, Luonan Chen - Nature Communications 2020 cited by 132
- Metabolic classification suggests the GLUT1/ALDOB/G6PD axis as a therapeutic target in chemotherapy-resistant pancreatic cancer
Authors: Yunguang Li, Shijie Tang, Xiaohan Shi, Jingwen Lv, Xueyuan Wu, Yehan Zhang, Huan Wang, Juan He, Yiqin Zhu, Yi Ju, Yajuan Zhang, Shiwei Guo, Weiwei Yang, Huiyong Yin, Luonan Chen, Dong Gao, Gang Jin - Cell Reports Medicine 2023 cited by 74
- Victors: a web-based knowledge base of virulence factors in human and animal pathogens
Authors: Samantha Sayers, Li Li, Edison Ong, Shunzhou Deng, Guanghua Fu, Yu Lin, Brian Yang, Shelley Zhang, Zhenzong Fa, Bin Zhao, Zuoshuang Xiang, Yongqing Li, Xing-Ming Zhao, Michal Olszewski, Luonan Chen, Yongqun He - Nucleic Acids Research, Nucleic Acids Res. 2018 cited by 203
- Deep latent space fusion for adaptive representation of heterogeneous multi-omics data
Authors: Chengming Zhang, Chengming Zhang, Yabin Chen, Tao Zeng, Chuanchao Zhang, Chuanchao Zhang, Luonan Chen - Briefings in Bioinformatics, Briefings Bioinform. 2021 cited by 60
- Chaotic simulated annealing by a neural network model with transient chaos
Authors: Luonan Chen, Kazuyuki Aihara - Neural Networks 1995 cited by 664
- Early Diagnosis of Complex Diseases by Molecular Biomarkers, Network Biomarkers, and Dynamical Network Biomarkers
Authors: Rui Liu, Xiangdong Wang, Kazuyuki Aihara, Luonan Chen - Medicinal Research Reviews 2013 cited by 358
- Inferring gene regulatory networks from gene expression data by path consistency algorithm based on conditional mutual information
Authors: Xiujun Zhang, Xing-Ming Zhao, Kun He, Le Lu, Yongwei Cao, Jingdong Liu, Jin-Kao Hao, Zhi-Ping Liu, Luonan Chen - Bioinformatics, Bioinform. 2011 cited by 340
- Dynamic network biomarker indicates pulmonary metastasis at the tipping point of hepatocellular carcinoma
Authors: Biwei Yang, Meiyi Li, Wenqing Tang, Weixin Liu, Si Zhang, Luonan Chen, Jinglin Xia - Nature Communications 2018 cited by 266
- A vitamin-C-derived DNA modification catalysed by an algal TET homologue
Authors: Jianhuang Xue, Guo-Dong Chen, Fuhua Hao, Hui Chen, Zhaoyuan Fang, Fangfang Chen, Bo Pang, Qing‐Lin Yang, Xinben Wei, Qiang-Qiang Fan, Changpeng Xin, Jiaohong Zhao, Xuan Deng, Bang-An Wang, Xiao-Jie Zhang, Yueying Chu, Hui Tang, Huiyong Yin, Weimin Ma, Luonan Chen, Jianping Ding, Elmar G. Weinhold, Rahul M. Kohli, Wen Liu, Zheng‐Jiang Zhu, Kaiyao Huang, Huiru Tang, Guoliang Xu - Nature 2019 cited by 107
- Dissecting tumor microenvironment from spatially resolved transcriptomics data by heterogeneous graph learning
Authors: Chunman Zuo, Junjie Xia, Luonan Chen - Nature Communications 2024 cited by 39
- Sex differences orchestrated by androgens at single-cell resolution
Authors: Fei Li, Xudong Xing, Qiqi Jin, Xiang‐Ming Wang, Pengfei Dai, Ming Han, Huili Shi, Ze Zhang, Xianlong Shao, Yunyi Peng, Yiqin Zhu, Jiayi Xu, Dan Li, Yu Chen, Wei Wu, Qiao Wang, Yu Chen, Luonan Chen, Fan Bai, Dong Gao - Nature 2024 cited by 72
