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Martin Hemberg

Active 2001–2025

93
Papers
20,019
Citations
50
h-index
83
i10-index

Citations

Citations per year for Martin Hemberg1957: 1 citations1976: 1 citations1977: 3 citations1983: 1 citations1987: 1 citations1990: 1 citations1996: 1 citations1997: 1 citations1999: 1 citations2001: 1 citations2003: 1 citations2004: 4 citations2005: 5 citations2006: 2 citations2007: 6 citations2008: 22 citations2009: 58 citations2010: 87 citations2011: 125 citations2012: 159 citations2013: 174 citations2014: 145 citations2015: 200 citations2016: 165 citations2017: 208 citations2018: 365 citations2019: 870 citations2020: 1,092 citations2021: 1,184 citations2022: 1,050 citations2023: 894 citations2024: 1,212 citations2025: 713 citations2026: 83 citations1958–1975: no citations, so these years are not shown1978–1982: no citations, so these years are not shown1984–1986: no citations, so these years are not shown1988–1989: no citations, so these years are not shown1991–1995: no citations, so these years are not shown1998: no citations, so this year is not shown2000: no citations, so this year is not shown2002: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,808 citing papers, 30.6% of this breakdownChina: 1,658 citing papers, 13.4% of this breakdownUnited Kingdom: 1,030 citing papers, 8.3% of this breakdownGermany: 774 citing papers, 6.2% of this breakdownCanada: 426 citing papers, 3.4% of this breakdownFrance: 348 citing papers, 2.8% of this breakdownAustralia: 345 citing papers, 2.8% of this breakdownItaly: 303 citing papers, 2.4% of this breakdownSpain: 296 citing papers, 2.4% of this breakdownSwitzerland: 292 citing papers, 2.4% of this breakdownNetherlands: 272 citing papers, 2.2% of this breakdownJapan: 263 citing papers, 2.1% of this breakdown
0%30.6%Other 21%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology68%
  • Medicine11.6%
  • Neuroscience10.4%
  • Immunology and Microbiology3.2%
  • Computer Science2.4%
  • Agricultural and Biological Sciences1.4%
  • Other3%

Topics

  • Single-cell and spatial transcriptomics12.8%
  • RNA Research and Splicing3.9%
  • Cell Image Analysis Techniques3.5%
  • Gene expression and cancer classification3.5%
  • Neuroinflammation and Neurodegeneration Mechanisms3.3%
  • Genomics and Chromatin Dynamics3.3%
  • Other69.7%

Coauthors

All papers

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  1. The Human Cell Atlas

    Authors: Aviv Regev, Sarah A Teichmann, Eric S Lander, Ido Amit, Christophe Benoist, Ewan Birney, Bernd Bodenmiller, Peter Campbell, Piero Carninci, Menna Clatworthy, Hans Clevers, Bart Deplancke, Ian Dunham, James Eberwine, Roland Eils, Wolfgang Enard, Andrew Farmer, Lars Fugger, Berthold Göttgens, Nir Hacohen, Muzlifah Haniffa, Martin Hemberg, Seung Kim, Paul Klenerman, Arnold Kriegstein, Ed Lein, Sten Linnarsson, Emma Lundberg, Joakim Lundeberg, Partha Majumder, John C Marioni, Miriam Merad, Musa Mhlanga, Martijn Nawijn, Mihai Netea, Garry Nolan, Dana Pe'er, Anthony Phillipakis, Chris P Ponting, Stephen Quake, Wolf Reik, Orit Rozenblatt-Rosen, Joshua Sanes, Rahul Satija, Ton N Schumacher, Alex Shalek, Ehud Shapiro, Padmanee Sharma, Jay W Shin, Oliver Stegle, Michael Stratton, Michael J T Stubbington, Fabian J Theis, Matthias Uhlen, Alexander van Oudenaarden, Allon Wagner, Fiona Watt, Jonathan Weissman, Barbara Wold, Ramnik Xavier, Nir Yosef, Human Cell Atlas Meeting Participants - eLife 2017 cited by 2,352

  2. SC3 - consensus clustering of single-cell RNA-Seq data

    Authors: Vladimir Yu Kiselev, Kristina Kirschner, Michael T. Schaub, Tallulah Andrews, Andrew Yiu, Tamir Chandra, Kedar Nath Natarajan, Wolf Reik, Mauricio Barahona, Anthony R. Green, Martin Hemberg - Nature Methods 2016 cited by 1,658

  3. Challenges in unsupervised clustering of single-cell RNA-seq data

    Authors: Vladimir Yu Kiselev, Tallulah Andrews, Martin Hemberg - Nature Reviews Genetics 2019 cited by 1,292

  4. Souporcell: robust clustering of single-cell RNA-seq data by genotype without reference genotypes

    Authors: Haynes Heaton, Arthur M. Talman, Andrew Knights, Maria Imaz, Daniel J. Gaffney, Richard Durbin, Martin Hemberg, Mara Lawniczak - Nature Methods 2020 cited by 555

  5. scmap: projection of single-cell RNA-seq data across data sets

    Authors: Vladimir Yu Kiselev, Andrew Yiu, Martin Hemberg - Nature Methods 2018 cited by 836

  6. Quiescent cancer cells resist T cell attack by forming an immunosuppressive niche

    Authors: Pilar Baldominos, Alex Barbera-Mourelle, Olga Barreiro, Yu Huang, Andrew Wight, Jae-Won Cho, Xi Zhao, Guillem Estivill, Isam Adam, Xavier Sánchez, Shannon McCarthy, Julien Schaller, Zara Khan, Albert Ruzo, Ricardo Pastorello, Edward T. Richardson, Deborah Dillon, Paula Montero Llopis, Romualdo Barroso‐Sousa, Juliet Forman, Sachet A. Shukla, Sara M. Tolaney, Elizabeth A. Mittendorf, Ulrich H. von Andrian, Kai W. Wucherpfennig, Martin Hemberg, Judith Agudo - Cell 2022 cited by 323

  7. Widespread transcription at neuronal activity-regulated enhancers

    Authors: Tae-Kyung Kim, Martin Hemberg, Jesse Gray, Allen M. Costa, Daniel M. Bear, Jing Wu, David A. Harmin, Mike Laptewicz, Kellie Barbara-Haley, Scott Kuersten, Eirene Markenscoff-Papadimitriou, Dietmar Kuhl, Haruhiko Bito, Paul F. Worley, Gabriel Kreiman, Michael E. Greenberg - Nature 2010 cited by 2,546

  8. Temporal Tracking of Microglia Activation in Neurodegeneration at Single-Cell Resolution

    Authors: Hansruedi Mathys, Chinnakkaruppan Adaikkan, Fan Gao, Jennie Z. Young, E González Manet, Martin Hemberg, Philip L. De Jager, Richard M. Ransohoff, Aviv Regev, Li-Huei Tsai - Cell Reports 2017 cited by 814

  9. Astrocyte layers in the mammalian cerebral cortex revealed by a single-cell in situ transcriptomic map

    Authors: Omer Ali Bayraktar, Theresa Bartels, Staffan Holmqvist, Vitalii Kleshchevnikov, Araks Martirosyan, Damon Polioudakis, Lucile Ben Haim, Adam M. H. Young, Mykhailo Y. Batiuk, Kirti Prakash, Alexander P.Y. Brown, Kenny Roberts, Mercedes F. Paredes, Riki Kawaguchi, John H. Stockley, Khalida Sabeur, Sandra Chang, Eric J. Huang, Peter J. Hutchinson, Erik M. Ullian, Martin Hemberg, Giovanni Coppola, Matthew G. Holt, Daniel H. Geschwind, David H. Rowitch - Nature Neuroscience 2020 cited by 502

  10. High-throughput total RNA sequencing in single cells using VASA-seq

    Authors: Fredrik Salmén, Joachim De Jonghe, Tomasz S. Kamiński, Anna Alemany, Guillermo E. Parada, Joe Verity-Legg, Ayaka Yanagida, Timo N. Kohler, Nicholas Battich, Floris van den Brekel, Anna L. Ellermann, Alfonso Martínez Arias, Jennifer Nichols, Martin Hemberg, Florian Hollfelder, Alexander van Oudenaarden - Nature Biotechnology 2022 cited by 241

  11. Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data

    Authors: Tallulah Andrews, Vladimir Yu Kiselev, Davis J. McCarthy, Martin Hemberg - Nature Protocols 2020 cited by 318

  12. Tau promotes neurodegeneration through global chromatin relaxation

    Authors: Bess Frost, Martin Hemberg, Jada Lewis, Mel Β. Feany - Nature Neuroscience 2014 cited by 497

  13. Disruption of DNA-methylation-dependent long gene repression in Rett syndrome

    Authors: Harrison W. Gabel, Benyam Kinde, Hume Stroud, Caitlin S. Gilbert, David A. Harmin, Nathaniel R. Kastan, Martin Hemberg, Daniel H. Ebert, Michael E. Greenberg - Nature 2015 cited by 630

  14. M3Drop: dropout-based feature selection for scRNASeq

    Authors: Tallulah S. Andrews, Martin Hemberg - Bioinformatics, Bioinform. 2018 cited by 340

  15. A robust activity marking system for exploring active neuronal ensembles

    Authors: Andreas T. Sørensen, Yonatan A. Cooper, Michael V. Baratta, Feng‐Ju Weng, Yuxiang Zhang, Kartik Ramamoorthi, Robin Fropf, Emily LaVerriere, Jian Xue, Andrew J. Young, Colleen Schneider, Casper R. Gøtzsche, Martin Hemberg, Jerry C. P. Yin, Steven F. Maier, Yingxi Lin - eLife 2016 cited by 194

  16. The Malaria Cell Atlas: Single parasite transcriptomes across the complete Plasmodium life cycle

    Authors: Virginia M. Howick, Andrew J. C. Russell, Tallulah Andrews, Haynes Heaton, Adam J. Reid, Kedar Nath Natarajan, Hellen Butungi, Tom Metcalf, Lisa Verzier, Julian C. Rayner, Matthew Berriman, Jeremy K. Herren, Oliver Billker, Martin Hemberg, Arthur M. Talman, Mara Lawniczak - Science 2019 cited by 330

  17. Identifying cell populations with scRNASeq

    Authors: Tallulah Andrews, Martin Hemberg - Molecular Aspects of Medicine 2017 cited by 280

  18. Alternative splicing modulation by G-quadruplexes

    Authors: Ilias Georgakopoulos‐Soares, Guillermo E. Parada, Hei Yuen Wong, Ragini Medhi, Giulia Furlan, Roberto Munita, Eric A. Miska, Chun Kit Kwok, Martin Hemberg - Nature Communications 2022 cited by 136

  19. Spatially resolved analysis of pancreatic cancer identifies therapy-associated remodeling of the tumor microenvironment

    Authors: Carina Shiau, Jingyi Cao, Dennis Gong, Mark Gregory, Nicholas J Caldwell, Xunqin Yin, Jae-Won Cho, Peter L. Wang, Jennifer Su, Steven Wang, Jason Reeves, Tae Kyoung Kim, Youngmi Kim, Jimmy A. Guo, Nicole A. Lester, Jung Woo Bae, Ryan Zhao, Nathan Schurman, Jamie L. Barth, Maria Ganci, Ralph Weissleder, Tyler Jacks, Motaz Qadan, Theodore S. Hong, Jennifer Y. Wo, Hannah Roberts, Joseph Beechem, Carlos Fernández‐del Castillo, Mari Mino–Kenudson, David T. Ting, Martin Hemberg, William L. Hwang - Nature Genetics 2024 cited by 72

  20. Transcriptome-wide noise controls lineage choice in mammalian progenitor cells

    Authors: Hannah Chang, Martin Hemberg, Mauricio Barahona, Donald E. Ingber, Sui Huang - Nature 2008 cited by 1,188

  21. Genome-wide identification and characterization of functional neuronal activity–dependent enhancers

    Authors: Athar N. Malik, Thomas Vierbuchen, Martin Hemberg, Alex A Rubin, Emi Ling, Cameron H. Couch, Hume Stroud, Ivo Spiegel, Kyle Kai-How Farh, David A. Harmin, Michael E. Greenberg - Nature Neuroscience 2014 cited by 288

  22. False signals induced by single-cell imputation

    Authors: Tallulah S. Andrews, Martin Hemberg - F1000Research 2018 cited by 182

  23. Demuxafy: improvement in droplet assignment by integrating multiple single-cell demultiplexing and doublet detection methods

    Authors: Drew Neavin, Anne Senabouth, Himanshi Arora, Jimmy Tsz Hang Lee, Aida Ripoll-Cladellas, Lude Franke, Shyam Prabhakar, Chun Ye, Davis J. McCarthy, Marta Melé, Martin Hemberg, Joseph E. Powell - Genome biology 2024 cited by 67

  24. Extensive remodeling of the extracellular matrix during aging contributes to age-dependent impairments of muscle stem cell functionality

    Authors: Svenja C. Schüler, Joanna Kirkpatrick, Manuel Schmidt, Deolinda Santinha, Philipp Koch, Simone Di Sanzo, Emilio Cirri, Martin Hemberg, Alessandro Ori‬‬, Julia von Maltzahn - Cell Reports 2021 cited by 103