Todd P. Michael
Active 2002–2026
- 86
- Papers
- 18,938
- Citations
- 55
- h-index
- 79
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology45.4%
- Agricultural and Biological Sciences43.3%
- Medicine3.5%
- Environmental Science1.8%
- Neuroscience1.6%
- Chemistry1.1%
- Other3.3%
Topics
- Plant Molecular Biology Research8.6%
- Genomics and Phylogenetic Studies6.7%
- Chromosomal and Genetic Variations5.4%
- Genetic Mapping and Diversity in Plants and Animals5.2%
- Photosynthetic Processes and Mechanisms5.2%
- Plant Reproductive Biology3.6%
- Other65.3%
Coauthors
- Nolan T. Hartwick14
- Todd C. Mockler14
- Joanne Chory10
- Joseph R. Ecker10
- Bradley W. Abramson9
- Kelly Colt9
- Robert VanBuren9
- Eric Lam7
- S. Timothy Motley7
- Steve A. Kay7
- Allen Mamerto6
- C. Robertson McClung6
- Jeremiah J. Minich6
- Nicholas Allsing6
- Detlef Weigel5
- Eric Lyons5
- Henry D. Priest5
- Shane G. Poplawski5
- Anthony Aylward4
- Douglas W. Bryant4
- Emily R. Murray4
- Florian Jupe4
- Haibao Tang4
- Michael C. Schatz4
All papers
- 1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana
Authors: Carlos Alonso-Blanco, Jorge Andrade, Claude Becker, Felix Bemm, Joy Bergelson, Karsten M. Borgwardt, Jun Cao, Eunyoung Chae, Todd M. Dezwaan, Wei Ding, Joseph R. Ecker, Moises Exposito-Alonso, Ashley Farlow, Joffrey Fitz, Xiangchao Gan, Dominik G. Grimm, Angela M. Hancock, Stefan R. Henz, Svante Holm, Matthew Horton, Mike Jarsulic, Randall A. Kerstetter, Arthur Korte, Pamela Korte, Christa Lanz, Cheng-Ruei Lee, Dazhe Meng, Todd P. Michael, Richard Mott, Ni Wayan Muliyati, Thomas Nägele, Matthias Nagler, Viktoria Nizhynska, Magnus Nordborg, Polina Yu. Novikova, F. Xavier Picó, Alexander Platzer, Fernando A. Rabanal, Alex Rodriguez, Beth A. Rowan, Patrice A. Salomé, Karl J. Schmid, Robert J. Schmitz, Ümit Seren, Felice Gianluca Sperone, Mitchell Sudkamp, Hannes Svardal, Matt M. Tanzer, Donald Todd, Samuel L. Volchenboum, Congmao Wang, George Wang, Xi Wang, Wolfram Weckwerth, Detlef Weigel, Xuefeng Zhou - Cell 2016 cited by 1,531
- The genetic and epigenetic landscape of the Arabidopsis centromeres
Authors: Matthew Naish, Michael Alonge, Piotr Włodzimierz, Andrew J. Tock, Bradley W. Abramson, Anna Schmücker, Terezie Mandáková, Bhagyshree Jamge, Christophe Lambing, Pallas Kuo, Natasha Yelina, Nolan T. Hartwick, Kelly Colt, Lisa M. Smith, Jurriaan Ton, Tetsuji Kakutani, Robert A. Martienssen, Korbinian Schneeberger, Martin A. Lysák, Frédéric Berger, Alexandros Bousios, Todd P. Michael, Michael C. Schatz, Ian R. Henderson - Science 2021 cited by 471
- Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
Authors: Taiji Kawakatsu, Shao‐shan Carol Huang, Florian Jupe, Eriko Sasaki, Robert J. Schmitz, Mark A. Urich, Rosa Castanon, Joseph R. Nery, Cesar Barragan, Yupeng He, Huaming Chen, Manu Dubin, Cheng‐Ruei Lee, Congmao Wang, Felix Bemm, Claude Becker, Ryan C. O’Neil, Ronan C. O’Malley, Danjuma Quarless, Nicholas J. Schork, Detlef Weigel, Magnus Nordborg, Joseph R. Ecker, Carlos Alonso‐Blanco, Jorge Andrade, Claude Becker, Felix Bemm, Joy Bergelson, Karsten Borgwardt, Eunyoung Chae, Todd M. DeZwaan, Wei Ding, Joseph R. Ecker, Moisés Expósito‐Alonso, Ashley Farlow, Joffrey Fitz, Xiangchao Gan, Dominik G. Grimm, Angela M. Hancock, Stefan R. Henz, Svante Holm, Matthew Horton, Mike Jarsulic, Randall A. Kerstetter, Arthur Korte, Pamela Korte, Christa Lanz, Chen-Ruei Lee, Dazhe Meng, Todd P. Michael, Richard Mott, Ni Wayan Muliyati, Thomas Nägele, Matthias Nagler, Viktoria Nizhynska, Magnus Nordborg, Polina Novikova, F. Xavier Picó, Alexander Platzer, Fernando A. Rabanal, Álex Rodríguez, Beth A. Rowan, Patrice A. Salomé, Karl Schmid, Robert J. Schmitz, Ümit Seren, F. Gianluca Sperone, Mitchell Sudkamp, Hannes Svardal, Matt M. Tanzer, Donald Todd, Samuel L. Volchenboum, Congmao Wang, George Wang, Xi Wang, Wolfram Weckwerth, Detlef Weigel, Xuefeng Zhou - Cell 2016 cited by 798
- Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
Authors: Susanna Atwell, Yu Huang, Bjarni J. Vilhjálmsson, G. Willems, Matthew Horton, Yan Li, Dazhe Meng, Alexander Platt, Aaron M. Tarone, Tina T. Hu, Rong Jiang, Ni Wayan Muliyati, Xu Zhang, Muhammad Ali Amer, Ivan Baxter, Benjamin Brachi, Joanne Chory, Caroline Dean, Marilyne Debieu, Juliette de Meaux, Joseph R. Ecker, Nathalie Faure, Joel M. Kniskern, Jonathan D. G. Jones, Todd P. Michael, Adnane Nemri, Fabrice Roux, David E. Salt, Chunlao Tang, Marco Todesco, M. Brian Traw, Detlef Weigel, Paul Marjoram, Justin Borevitz, Joy Bergelson, Magnus Nordborg - Nature 2010 cited by 1,854
- A new Cannabis genome assembly associates elevated cannabidiol (CBD) with hemp introgressed into marijuana
Authors: Christopher J. Grassa, George D. Weiblen, Jonathan P. Wenger, Clemon J. Dabney, Shane G. Poplawski, S. Timothy Motley, Todd P. Michael, Christopher Schwartz - New Phytologist 2021 cited by 184
- Building near-complete plant genomes
Authors: Todd P. Michael, Robert VanBuren - Current Opinion in Plant Biology 2020 cited by 212
- The genome of woodland strawberry (Fragaria vesca)
Authors: Vladimir Shulaev, Daniel James Sargent, Ross Crowhurst, Todd C. Mockler, Otto Folkerts, Arthur L. Delcher, Pankaj Jaiswal, Keithanne Mockaitis, Aaron Liston, Shrinivasrao P. Mane, Paul Burns, Thomas M. Davis, Janet P. Slovin, Nahla Bassil, Roger P. Hellens, Clive Evans, Tim Harkins, Chinnappa D. Kodira, Brian Desany, Oswald Crasta, Roderick V. Jensen, Andrew C. Allan, Todd P. Michael, João Carlos Setúbal, Jean‐Marc Celton, D. Jasper G. Rees, Kelly P. Williams, Sarah H. Holt, Juan Jairo Ruiz Rojas, Mithu Chatterjee, Bo Liu, Hermán Silva, Lee A. Meisel, Avital Adato, Sergei A. Filichkin, Michela Troggio, Roberto Viola, Tia‐Lynn Ashman, Hao Wang, Palitha Dharmawardhana, Justin Elser, Rajani Raja, Henry D. Priest, Douglas W. Bryant, Samuel E. Fox, Scott A. Givan, Larry Wilhelm, Sushma Naithani, Alan Christoffels, David Y Salama, Jade Carter, Elena López‐Girona, Anna Zdepski, Wenqin Wang, Randall A. Kerstetter, Wilfried Schwab, Schuyler S. Korban, Jahn Davik, Amparo Monfort, Béatrice Denoyes-Rothan, Pere Arús, Ron Mittler, Barry S. Flinn, Asaph Aharoni, Jeffrey L. Bennetzen, Steven L. Salzberg, Allan W. Dickerman, Riccardo Velasco, Mark Borodovsky, Richard E. Veilleux, Kevin M. Folta - Nature Genetics 2010 cited by 1,252
- The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Authors: Jo Ann Banks, Tomoaki Nishiyama, Mitsuyasu Hasebe, John L. Bowman, Michael Gribskov, Claude W. dePamphilis, Victor A. Albert, Naoki Aono, Tsuyoshi Aoyama, Barbara A. Ambrose, Neil W. Ashton, Michael J. Axtell, Elizabeth I. Barker, Michael S. Barker, Jeffrey L. Bennetzen, Nicholas D. Bonawitz, Clint Chapple, Chaoyang Cheng, Luiz Gustavo Guedes Corrêa, Michael Dacre, Jeremy D. DeBarry, Ingo Drèyer, Marek Eliáš, Eric M. Engstrom, Mark Estelle, Liang Feng, Cédric Finet, Sandra K. Floyd, Wolf B. Frommer, Tomomichi Fujita, Lydia Gramzow, Michael Gutensohn, Jesper Harholt, Mitsuru Hattori, Alexander Heyl, Tadayoshi Hirai, Yuji Hiwatashi, Masaki Ishikawa, Mineko Iwata, Kenneth G. Karol, Barbara Koehler, Uener Kolukisaoglu, Minoru Kubo, Tetsuya Kurata, Sylvie Lalonde, Kejie Li, Ying Li, Amy Litt, Eric Lyons, Gerard Manning, Takeshi Maruyama, Todd P. Michael, Koji Mikami, Saori Miyazaki, Shin‐Ichi Morinaga, Takashi Murata, Bernd Mueller‐Roeber, David R. Nelson, Mari Obara, Yasuko Oguri, Richard G. Olmstead, Naoko T. Onodera, Bent Larsen Petersen, Birgit Pils, Michael J. Prigge, Stefan A. Rensing, Diego Mauricio Riaño‐Pachón, Alison W. Roberts, Yoshikatsu Sato, Henrik Vibe Scheller, Burkhard Schulz, Christian Schulz, Eugene V. Shakirov, Nakako Shibagaki, Naoki Shinohara, Dorothy E. Shippen, Iben Sørensen, Ryo Sotooka, Nagisa Sugimoto, Mamoru Sugita, Naomi Sumikawa, Miloš Tanurdžić, Günter Theißen, Peter Ulvskov, Sachiko Wakazuki, Jing‐Ke Weng, William G. T. Willats, Daniel Wipf, Paul G. Wolf, Lixing Yang, Andreas Zimmer, Qihui Zhu, Therese Mitros, Uffe Hellsten, Dominique Loqué, Robert Otillar, Asaf Salamov, Jeremy Schmutz, Harris Shapiro, Erika Lindquist and 3 more - Science 2011 cited by 905
- The complex architecture and epigenomic impact of plant T-DNA insertions
Authors: Florian Jupe, Angeline Rivkin, Todd P. Michael, Mark Zander, S. Timothy Motley, Justin P. Sandoval, R. Keith Slotkin, Huaming Chen, Rosa Castanon, Joseph R. Nery, Joseph R. Ecker - PLoS Genetics 2019 cited by 214
- The genetic and epigenetic landscape of the Arabidopsis centromeres
Authors: Matthew Naish, Michael Alonge, Piotr Włodzimierz, Andrew J. Tock, Bradley W. Abramson, Christophe Lambing, Pallas Kuo, Natasha Yelina, Nolan T. Hartwick, Kelly Colt, Tetsuji Kakutani, Robert A. Martienssen, Alexandros Bousios, Todd P. Michael, Michael C. Schatz, Ian R. Henderson - 2021 cited by 56
- Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
Authors: Rajeev K. Varshney, Wenbin Chen, Yupeng Li, Arvind K. Bharti, Rachit K. Saxena, Jessica A. Schlueter, Mark T.A. Donoghue, Sarwar Azam, Guangyi Fan, Adam M. Whaley, Andrew Farmer, Jaime Sheridan, Aiko Iwata‐Otsubo, Reetu Tuteja, R. Varma Penmetsa, Wei Wu, Hari D. Upadhyaya, Shiaw‐Pyng Yang, Trushar Shah, K B Saxena, Todd P. Michael, W. Richard McCombie, Bicheng Yang, Gengyun Zhang, Huanming Yang, Jun Wang, Charles Spillane, Douglas R. Cook, Gregory D. May, Xun Xu, Scott A. Jackson - Nature Biotechnology 2011 cited by 883
- Host biology, ecology and the environment influence microbial biomass and diversity in 101 marine fish species
Authors: Jeremiah J. Minich, Andreas Härer, Joseph Vechinski, Benjamin W. Frable, Zachary R. Skelton, Emily Kunselman, Michael Shane, Daniela S. Perry, Antonio G. González, Daniel McDonald, Rob Knight, Todd P. Michael, Eric E. Allen - Nature Communications 2022 cited by 112
- Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
Authors: Ray Ming, Robert VanBuren, Yanling Liu, Mei Yang, Yuepeng Han, Leiting Li, Qiong Zhang, Min-Jeong Kim, Michael C. Schatz, Michael S. Campbell, Jingping Li, John Bowers, Haibao Tang, Eric Lyons, Ann A. Ferguson, Giuseppe Narzisi, David R. Nelson, Crysten E. Blaby‐Haas, Andrea R. Gschwend, Yuannian Jiao, Joshua P. Der, Fanchang Zeng, Jennifer Han, Xiang Jia Min, Karen A. Hudson, Ratnesh Singh, Aleel K. Grennan, Steven J. Karpowicz, Jennifer R. Watling, Kikukatsu Ito, Sharon A. Robinson, Matthew E. Hudson, Qingyi Yu, Todd C. Mockler, Andrew Carroll, Yun Zheng, Ramanjulu Sunkar, Ruizong Jia, Nancy Chen, Jie Arro, Ching Man Wai, Eric Wafula, Ashley K. Spence, Yanni Han, Liming Xu, Jisen Zhang, Rhiannon M. Peery, Miranda J. Haus, Wenwei Xiong, James A. Walsh, Jun Wu, Ming-Li Wang, Yun Zhu, Robert E. Paull, Anne Britt, Chunguang Du, Stephen R. Downie, Mary A. Schuler, Todd P. Michael, Steve P Long, Donald R. Ort, J. William Schopf, David R. Gang, Ning Jiang, Mark Yandell, Claude W. dePamphilis, Sabeeha Merchant, Andrew H. Paterson, Bob B. Buchanan, Shaohua Li, J. Shen‐Miller - Genome biology 2013 cited by 430
- High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell
Authors: Todd P. Michael, Florian Jupe, Felix Bemm, S. Timothy Motley, Justin P. Sandoval, Christa Lanz, Olivier Loudet, Detlef Weigel, Joseph R. Ecker - Nature Communications 2018 cited by 326
- Exceptional subgenome stability and functional divergence in the allotetraploid Ethiopian cereal teff
Authors: Robert VanBuren, Ching Man Wai, Xuewen Wang, Jeremy Pardo, Alan Yocca, Hao Wang, Srinivasa R. Chaluvadi, Guomin Han, Douglas W. Bryant, Patrick P. Edger, Joachim Messing, Mark E. Sorrells, Todd C. Mockler, Jeffrey L. Bennetzen, Todd P. Michael - Nature Communications 2020 cited by 200
- Gapless assembly of maize chromosomes using long-read technologies
Authors: Jianing Liu, Arun S. Seetharam, Kapeel Chougule, Shujun Ou, Kyle W Swentowsky, Jonathan I. Gent, Víctor Llaca, Margaret Woodhouse, Nancy Manchanda, Gernot G. Presting, David Kudrna, Magdy Alabady, Candice N. Hirsch, Kevin Fengler, Doreen Ware, Todd P. Michael, Matthew B. Hufford, R. Kelly Dawe - Genome biology 2020 cited by 144
- The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
Authors: Ray Ming, Shaobin Hou, Yun Feng, Qingyi Yu, Alexandre Dionne‐Laporte, Jimmy H. Saw, Pavel Senin, Wei Wang, Benjamin V. Ly, Kanako L. Lewis, Steven L. Salzberg, Lu Feng, Meghan R. Jones, Rachel L. Skelton, Jan E. Murray, Cuixia Chen, Wubin Qian, Junguo Shen, Peng Du, Moriah Eustice, Eric Tong, Haibao Tang, Eric Lyons, Robert E. Paull, Todd P. Michael, Kerr Wall, Danny W. Rice, Henrik H. Albert, Ming-Li Wang, Yun Zhu, Michael C. Schatz, Niranjan Nagarajan, Ricelle A. Acob, Peizhu Guan, Andrea L. Blas, Ching Man Wai, C. Ackerman, Yan Ren, Chao Liu, Jianmei Wang, Jianping Wang, Jong-Kuk Na, Eugene V. Shakirov, Brian J. Haas, Jyothi Thimmapuram, David R. Nelson, Xiyin Wang, John Bowers, Andrea R. Gschwend, Arthur L. Delcher, Ratnesh Singh, Jon Y. Suzuki, Savarni Tripathi, Kabi R. Neupane, Hairong Wei, Beth Irikura, Maya Devi Paidi, Ning Jiang, Wenli Zhang, Gernot G. Presting, Aaron J. Windsor, Rafael Navajas‐Pérez, M. Torres, F. Alex Feltus, Brad W. Porter, Yingjun Li, A. Max. Burroughs, Ming‐Cheng Luo, Lei Liu, David A. Christopher, Stephen M. Mount, Paul H. Moore, Tak Sugimura, Jiming Jiang, Mary A. Schuler, Vikki Friedman, Thomas Mitchell‐Olds, Dorothy E. Shippen, Claude W. dePamphilis, Jeffrey D. Palmer, Michael Freeling, Andrew H. Paterson, Dennis Gonsalves, Lei Wang, M. Shahid Alam - Nature 2008 cited by 1,116
- Network Discovery Pipeline Elucidates Conserved Time-of-Day–Specific cis-Regulatory Modules
Authors: Todd P. Michael, Todd C. Mockler, Ghislaı̀n Breton, Connor McEntee, Amanda Byer, Jonathan D Trout, Samuel P. Hazen, Rongkun Shen, Henry D. Priest, Christopher M. Sullivan, Scott A. Givan, Marcelo J. Yanovsky, Fangxin Hong, Steve A. Kay, Joanne Chory - PLoS Genetics 2008 cited by 566
- Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum
Authors: Robert VanBuren, Doug Bryant, Patrick P. Edger, Haibao Tang, Diane Burgess, Dinakar Challabathula, Kristi Spittle, Richard Hall, Jenny Gu, Eric Lyons, Michael Freeling, Dorothea Bartels, Boudewijn ten Hallers, Alex Hastie, Todd P. Michael, Todd C. Mockler - Nature 2015 cited by 323
- Isolation and analysis of high quality nuclear DNA with reduced organellar DNA for plant genome sequencing and resequencing
Authors: Kerry Ann Lutz, Wenqin Wang, Anna Zdepski, Todd P. Michael - BMC Biotechnology 2011 cited by 154
- Temporal, Environmental, and Biological Drivers of the Mucosal Microbiome in a Wild Marine Fish, Scomber japonicus
Authors: Jeremiah J. Minich, Semar Petrus, Julius D. Michael, Todd P. Michael, Rob Knight, Eric E. Allen - mSphere 2020 cited by 96
- Scalable Biosynthesis of the Seaweed Neurochemical, Kainic Acid
Authors: Jonathan R. Chekan, Shaun M. K. McKinnie, M. Moore, Shane G. Poplawski, Todd P. Michael, Bradley S. Moore - Angewandte Chemie International Edition 2019 cited by 83
- PanKmer: k-mer-based and reference-free pangenome analysis
Authors: Anthony Aylward, Semar Petrus, Allen Mamerto, Nolan T. Hartwick, Todd P. Michael - Bioinformatics, Bioinform. 2023 cited by 29
- Feeding the future
Authors: Susan R. McCouch, Gregory J. Baute, James M. Bradeen, Paula Bramel, P. K. Bretting, Edward S. Buckler, John M. Burke, David Charest, Sylvie Cloutier, Glenn S. Cole, Hannes Dempewolf, Michaël Dingkuhn, Catherine Feuillet, Paul Gepts, Dário Grattapaglia, Luigi Guarino, Scott A. Jackson, Sandra Knapp, Peter Langridge, Amy Lawton‐Rauh, Qui Lijua, Charlotte Lusty, Todd P. Michael, Sean Myles, Ken Naito, Randall L. Nelson, Reno Pontarollo, Christopher M. Richards, Loren H. Rieseberg, Jeffrey Ross‐Ibarra, Steve Rounsley, Ruaraidh Sackville Hamilton, Ulrich Schurr, Nils Stein, Norihiko Tomooka, Esther van der Knaap, David L. Van Tassel, J. Toll, José Francisco Montenegro Valls, Rajeev K. Varshney, J. A. Ward, Robbie Waugh, Peter Wenzl, Daniel Zamir - Nature 2013 cited by 566
