Uri Alon
Active 1983–2026
- 203
- Papers
- 67,666
- Citations
- 103
- h-index
- 185
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology44%
- Computer Science26.1%
- Physics and Astronomy7.5%
- Medicine6%
- Neuroscience3.5%
- Engineering2.7%
- Other10.2%
Topics
- Gene Regulatory Network Analysis6.9%
- Bioinformatics and Genomic Networks5.6%
- Gene expression and cancer classification3.9%
- Complex Network Analysis Techniques3.2%
- Topic Modeling2.5%
- Microbial Metabolic Engineering and Bioproduction2.2%
- Other75.7%
Coauthors
- Avi Mayo38
- Anat Bren19
- Ron Milo19
- E. Dekel16
- Shalev Itzkovitz16
- Nadav Kashtan14
- Graham Neubig13
- Yuval Hart12
- Eran Yahav10
- Omer Karin10
- Alon Zaslaver9
- Avi E. Mayo9
- Avichai Tendler9
- Naama Geva‐Zatorsky9
- Tamar Danon9
- Tomer Milo9
- Hila Sheftel8
- Miri Adler8
- Nitzan Rosenfeld8
- Oren Shoval8
- Yael Korem Kohanim8
- Alex Sigal7
- Aman Madaan7
- Jean Hausser7
All papers
- WebArena: A Realistic Web Environment for Building Autonomous Agents
Authors: Shuyan Zhou, Frank F. Xu, Hao Zhu, Xuhui Zhou, Robert Lo, Abishek Sridhar, Xianyi Cheng, Tianyue Ou, Yonatan Bisk, Daniel Fried, Uri Alon, Graham Neubig - ICLR 2024 cited by 1,673
- Self-Refine: Iterative Refinement with Self-Feedback
Authors: Aman Madaan, Niket Tandon, Prakhar Gupta, Skyler Hallinan, Luyu Gao, Sarah Wiegreffe, Uri Alon, Nouha Dziri, Shrimai Prabhumoye, Yiming Yang, Shashank Gupta, Bodhisattwa Prasad Majumder, Katherine Hermann, Sean Welleck, Amir Yazdanbakhsh, Peter Clark - NeurIPS 2023 cited by 4,078
- Network Motifs: Simple Building Blocks of Complex Networks
Authors: Ron Milo, Shai S. Shen-Orr, Shalev Itzkovitz, Nadav Kashtan, Dmitri B. Chklovskii, Uri Alon - Science 2002 cited by 7,553
- How Attentive are Graph Attention Networks?
Authors: Shaked Brody, Uri Alon, Eran Yahav - ICLR 2022 cited by 1,944
- PAL: Program-aided Language Models
Authors: Luyu Gao, Aman Madaan, Shuyan Zhou, Uri Alon, Pengfei Liu, Yiming Yang, Jamie Callan, Graham Neubig - ICML 2023 cited by 774
- Universal Self-Consistency for Large Language Model Generation
Authors: Xinyun Chen, Renat Aksitov, Uri Alon, Jie Ren, Kefan Xiao, Pengcheng Yin, Sushant Prakash, Charles Sutton, Xuezhi Wang, Denny Zhou - arXiv (Cornell University), CoRR 2023 cited by 153
- On the Bottleneck of Graph Neural Networks and its Practical Implications
Authors: Uri Alon, Eran Yahav - ICLR 2021 cited by 1,002
- Network motifs: theory and experimental approaches
Authors: Uri Alon - Nature Reviews Genetics 2007 cited by 3,403
- Learning Performance-Improving Code Edits
Authors: Alexander Shypula, Aman Madaan, Yimeng Zeng, Uri Alon, Jacob R. Gardner, Yiming Yang, Milad Hashemi, Graham Neubig, Parthasarathy Ranganathan, Osbert Bastani, Amir Yazdanbakhsh - ICLR 2024 cited by 156
- A Systematic Evaluation of Large Language Models of Code
Authors: Frank F. Xu, Uri Alon, Graham Neubig, Vincent Josua Hellendoorn - SIGPLAN International Symposium on Machine Programming, MAPS@PLDI 2022 cited by 498
- In-Context Learning with Long-Context Models: An In-Depth Exploration
Authors: Amanda Bertsch, Maor Ivgi, Uri Alon, Jonathan Berant, Matthew R. Gormley, Graham Neubig - arXiv (Cornell University), CoRR 2024 cited by 95
- Cancer-associated fibroblast compositions change with breast cancer progression linking the ratio of S100A4+ and PDPN+ CAFs to clinical outcome
Authors: Gil Friedman, Oshrat Levi-Galibov, Eyal David, Chamutal Bornstein, Amir Giladi, Maya Dadiani, Avi Mayo, Coral Halperin, Meirav Pevsner‐Fischer, Hagar Lavon, Shimrit Mayer, Reinat Nevo, Yaniv Stein, Nora Balint‐Lahat, Iris Barshack, H. Raza Ali, Carlos Caldas, Einav Nili Gal‐Yam, Uri Alon, Ido Amit, Ruth Scherz‐Shouval - Nature Cancer 2020 cited by 354
- Circuit Design Features of a Stable Two-Cell System
Authors: Xu Zhou, Ruth A. Franklin, Miri Adler, Jeremy B. Jacox, Will Bailis, Justin A. Shyer, Richard A. Flavell, Avi Mayo, Uri Alon, Ruslan Medzhitov - Cell 2018 cited by 440
- Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays
Authors: Uri Alon, Naama Barkai, Daniel A. Notterman, Kurt Gish, Suzanne E. Ybarra, David H. Mack, Arnold J. Levine - National Academy of Sciences, Proceedings of the National Academy of Sciences 1999 cited by 4,210
- Self-Refine: Iterative Refinement with Self-Feedback
Authors: Uri Alon, Peter Clark, Nouha Dziri, Luyu Gao, Prakhar Gupta, Shashank Gupta, Skyler Hallinan, Nouha Dziri, Aman Madaan, Bodhisattwa Prasad Majumder, Shashank Gupta, Niket Tandon, Sean Welleck, Sarah Wiegreffe, Yiming Yang, Peter Clark - Advances in Neural Information Processing Systems 36 2023 cited by 71
- CodeBERTScore: Evaluating Code Generation with Pretrained Models of Code
Authors: Shuyan Zhou, Uri Alon, Sumit Agarwal, Graham Neubig - Conference on Empirical Methods in Natural Language Processing, EMNLP 2023 cited by 79
- DocCoder: Generating Code by Retrieving and Reading Docs
Authors: Shuyan Zhou, Uri Alon, Frank F. Xu, Wang, Zhiruo, Zhengbao Jiang, Graham Neubig - ICLR 2023 cited by 223
- The tumor microenvironment shows a hierarchy of cell-cell interactions dominated by fibroblasts
Authors: Shimrit Mayer, Tomer Milo, Achinoam Isaacson, Coral Halperin, Shoval Miyara, Yaniv Stein, Chen Lior, Meirav Pevsner‐Fischer, Eldad Tzahor, Avi Mayo, Uri Alon, Ruth Scherz‐Shouval - Nature Communications 2023 cited by 185
- Transformers Can Achieve Length Generalization But Not Robustly
Authors: Yongchao Zhou, Uri Alon, Xinyun Chen, Xuezhi Wang, Rishabh Agarwal, Denny Zhou - arXiv (Cornell University), CoRR 2024 cited by 64
- code2vec: Learning Distributed Representations of Code
Authors: Uri Alon, Meital Zilberstein, Omer Levy, Eran Yahav - on Programming Languages, Proc. ACM Program. Lang. 2019 cited by 197
- Network motifs in the transcriptional regulation network of Escherichia coli
Authors: Shai S. Shen-Orr, Ron Milo, Shmoolik Mangan, Uri Alon - Nature Genetics 2002 cited by 3,058
- Language Models of Code are Few-Shot Commonsense Learners
Authors: Aman Madaan, Shuyan Zhou, Uri Alon, Yiming Yang, Graham Neubig - Conference on Empirical Methods in Natural Language Processing, EMNLP 2022 cited by 106
- Structure and function of the feed-forward loop network motif
Authors: Shmoolik Mangan, Uri Alon - National Academy of Sciences, Proceedings of the National Academy of Sciences 2003 cited by 1,918
- An Introduction to Systems Biology
Authors: Uri Alon - 2006 cited by 2,909
