Yuri I. Wolf
Active 1990–2026
- 234
- Papers
- 58,896
- Citations
- 119
- h-index
- 216
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology61.9%
- Environmental Science11.9%
- Agricultural and Biological Sciences9.6%
- Medicine7.2%
- Immunology and Microbiology2.5%
- Engineering1.2%
- Other5.7%
Topics
- Genomics and Phylogenetic Studies8.5%
- CRISPR and Genetic Engineering7.4%
- RNA and protein synthesis mechanisms5.3%
- Bacteriophages and microbial interactions4.8%
- Microbial Community Ecology and Physiology3%
- Bacterial Genetics and Biotechnology2.8%
- Other68.2%
Coauthors
- Eugene V. Koonin217
- Kira S. Makarova79
- Igor B. Rogozin21
- Michael Y. Galperin16
- Mart Krupovìč15
- Sergey Shmakov15
- L. Aravind14
- Natalya Yutin13
- Feng Zhang11
- Valerian V. Dolja11
- Marina V. Omelchenko10
- Alexander E. Lobkovsky9
- I. King Jordan8
- Liran Carmel8
- Roman L. Tatusov8
- Alexander V. Sorokin7
- Guilhem Faure7
- Jens H. Kuhn7
- Konstantin Severinov7
- Nash D. Rochman7
- Nick V. Grishin7
- Pere Puigbò7
- Alexander F. Yakunin6
- David M. Kristensen6
All papers
- Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants
Authors: Kira S. Makarova, Yuri I. Wolf, Jaime Iranzo, Sergey Shmakov, Omer S. Alkhnbashi, Stan J. J. Brouns, Emmanuelle Charpentier, David R. Cheng, Daniel H. Haft, Philippe Horvath, Sylvain Moineau, Francisco J. M. Mojica, David Scott, Shiraz A. Shah, Virginijus Šikšnys, Michael P. Terns, Česlovas Venclovas, Malcolm F. White, Alexander F. Yakunin, Winston X. Yan, Feng Zhang, Roger A. Garrett, Rolf Backofen, John van der Oost, Rodolphe Barrangou, Eugene V. Koonin - Nature Reviews Microbiology 2019 cited by 2,464
- An updated evolutionary classification of CRISPR–Cas systems
Authors: Kira S. Makarova, Yuri I. Wolf, Omer S. Alkhnbashi, Fabrizio Costa, Shiraz A. Shah, Sita J. Saunders, Rodolphe Barrangou, Stan J. J. Brouns, Emmanuelle Charpentier, Daniel H. Haft, Philippe Horvath, Sylvain Moineau, Francisco J. M. Mojica, Rebecca M. Terns, Michael P. Terns, Malcolm F. White, Alexander F. Yakunin, Roger A. Garrett, John van der Oost, Rolf Backofen, Eugene V. Koonin - Nature Reviews Microbiology 2015 cited by 2,570
- Diverse enzymatic activities mediate antiviral immunity in prokaryotes
Authors: Linyi Gao, Han Altae-Tran, Francisca Böhning, Kira S. Makarova, Michael Segel, Jonathan L. Schmid‐Burgk, Jeremy Koob, Yuri I. Wolf, Eugene V. Koonin, Feng Zhang - Science 2020 cited by 688
- Evolution and classification of the CRISPR–Cas systems
Authors: Kira S. Makarova, Daniel H. Haft, Rodolphe Barrangou, Stan J. J. Brouns, Emmanuelle Charpentier, Philippe Horvath, Sylvain Moineau, Francisco J. M. Mojica, Yuri I. Wolf, Alexander F. Yakunin, John van der Oost, Eugene V. Koonin - Nature Reviews Microbiology 2011 cited by 2,496
- COG database update: focus on microbial diversity, model organisms, and widespread pathogens
Authors: Michael Y. Galperin, Yuri I. Wolf, Kira S. Makarova, Roberto Vera Alvarez, David Landsman, Eugene V. Koonin - Nucleic Acids Research, Nucleic Acids Res. 2020 cited by 995
- Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems
Authors: Sergey Shmakov, Omar O. Abudayyeh, Kira S. Makarova, Yuri I. Wolf, Jonathan S. Gootenberg, Ekaterina Semenova, Leonid Minakhin, Julia Joung, Silvana Konermann, Konstantin Severinov, Feng Zhang, Eugene V. Koonin - Molecular Cell 2015 cited by 1,252
- Diversity and evolution of class 2 CRISPR–Cas systems
Authors: Sergey Shmakov, Aaron A. Smargon, David Scott, David Cox, Neena Pyzocha, Winston X. Yan, Omar O. Abudayyeh, Jonathan S. Gootenberg, Kira S. Makarova, Yuri I. Wolf, Konstantin Severinov, Feng Zhang, Eugene V. Koonin - Nature Reviews Microbiology 2017 cited by 1,075
- Defense Islands in Bacterial and Archaeal Genomes and Prediction of Novel Defense Systems
Authors: Kira S. Makarova, Yuri I. Wolf, Sagi Snir, Eugene V. Koonin - Journal of Bacteriology 2011 cited by 524
- Expanded microbial genome coverage and improved protein family annotation in the COG database
Authors: Michael Y. Galperin, Kira S. Makarova, Yuri I. Wolf, Eugene V. Koonin - Nucleic Acids Research, Nucleic Acids Res. 2014 cited by 1,662
- The COG database: an updated version includes eukaryotes
Authors: Roman L. Tatusov, Natalie D. Fedorova, John D. Jackson, Aviva R. Jacobs, Boris Kiryutin, Eugene V. Koonin, Dmitri M. Krylov, Raja Mazumder, Sergei L. Mekhedov, Anastasia N. Nikolskaya, B. Sridhar Rao, Sergei Smirnov, Alexander V. Sverdlov, Sona Vasudevan, Yuri I. Wolf, Jodie J. Yin, Darren A. Natale - BMC Bioinformatics, BMC Bioinform. 2003 cited by 4,514
- Expansion of the global RNA virome reveals diverse clades of bacteriophages
Authors: Uri Neri, Yuri I. Wolf, Simon Roux, Antônio Pedro Camargo, Benjamin Lee, Darius Kazlauskas, I. Min Chen, Natalia Ivanova, Lisa Zeigler Allen, David Páez-Espino, Donald A. Bryant, Devaki Bhaya, Adrienne B. Narrowe, Alexander J. Probst, Alexander Sczyrba, Annegret Kohler, Armand Séguin, Ashley Shade, Barbara J. Campbell, Björn D. Lindahl, Brandi Kiel Reese, Breanna M. Roque, Chris DeRito, Colin Averill, Daniel Cullen, David A. C. Beck, David A. Walsh, David M. Ward, Dongying Wu, Emiley A. Eloe‐Fadrosh, Eoin Brodie, Erica B. Young, Erik A. Lilleskov, Federico Castillo, Francis Martin, Gary R. LeCleir, Graeme T. Attwood, Hinsby Cadillo‐Quiroz, Holly M. Simon, Ian Hewson, Igor V. Grigoriev, James M. Tiedje, Janet Jansson, Janey Lee, Jean S. VanderGheynst, Jeff Dangl, Jeff S. Bowman, Jeffrey L. Blanchard, Jennifer L. Bowen, Jiangbing Xu, Jillian F. Banfield, Jody W. Deming, Joel E. Kostka, John M. Gladden, Josephine Z. Rapp, Joshua Sharpe, Katherine D. McMahon, Kathleen K. Treseder, Kay D. Bidle, Kelly C. Wrighton, Kimberlee Thamatrakoln, Klaus Nüsslein, Laura K. Meredith, Lucı́a Ramı́rez, Marc Buée, Marcel Huntemann, Marina Kalyuzhnaya, Mark P. Waldrop, Matthew B. Sullivan, Matthew O. Schrenk, Matthias Hess, Michael Vega, Michelle O’Malley, Mónica Medina, Naomi E. Gilbert, Nathalie Delherbe, Olivia U. Mason, Paul Dijkstra, Peter F. Chuckran, Petr Baldrián, Philippe Constant, Ramūnas Stepanauskas, Rebecca A. Daly, Regina Lamendella, Robert J. Gruninger, Robert M. McKay, Samuel Hylander, Sarah L. Lebeis, Sarah P. Esser, Silvia G. Acinas, Steven S. Wilhelm, Steven W. Singer, Susannah G. Tringe, Tanja Woyke, T. B. K. Reddy, Terrence H. Bell, Thomas Möck, Tim A. McAllister, Vera Thiel, Vincent J. Denef and 10 more - Cell 2022 cited by 311
- Global Organization and Proposed Megataxonomy of the Virus World
Authors: Eugene V. Koonin, Valerian V. Dolja, Mart Krupovìč, Arvind Varsani, Yuri I. Wolf, Natalya Yutin, F. Murilo Zerbini, Jens H. Kuhn - Microbiology and Molecular Biology Reviews 2020 cited by 632
- Expanded diversity of Asgard archaea and their relationships with eukaryotes
Authors: Yang Liu, Kira S. Makarova, Wen-Cong Huang, Yuri I. Wolf, A. N. NIKOL'SKAYA, Xinxu Zhang, Mingwei Cai, Cui‐Jing Zhang, Wei Xu, Zhu-Hua Luo, Lei Cheng, Eugene V. Koonin, Meng Li - Nature 2021 cited by 344
- Origins and Evolution of the Global RNA Virome
Authors: Yuri I. Wolf, Darius Kazlauskas, Jaime Iranzo, Adriana Lucía-Sanz, Jens H. Kuhn, Mart Krupovìč, Valerian V. Dolja, Eugene V. Koonin - mBio 2018 cited by 529
- A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
Authors: Kira S. Makarova, Nick V. Grishin, Svetlana A. Shabalina, Yuri I. Wolf, Eugene V. Koonin - Biology Direct 2006 cited by 1,178
- Evolutionary Genomics of Defense Systems in Archaea and Bacteria
Authors: Eugene V. Koonin, Kira S. Makarova, Yuri I. Wolf - Annual Review of Microbiology 2017 cited by 360
- Doubling of the known set of RNA viruses by metagenomic analysis of an aquatic virome
Authors: Yuri I. Wolf, Sukrit Silas, Yongjie Wang, Shuang Wu, M Bocek, Darius Kazlauskas, Mart Krupovìč, Andrew Fire, Valerian V. Dolja, Eugene V. Koonin - Nature Microbiology 2020 cited by 283
- Comparative genomics of defense systems in archaea and bacteria
Authors: Kira S. Makarova, Yuri I. Wolf, Eugene V. Koonin - Nucleic Acids Research 2013 cited by 454
- Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements
Authors: Kira S. Makarova, Yuri I. Wolf, John van der Oost, Eugene V. Koonin - Biology Direct 2009 cited by 319
- Evolutionary entanglement of mobile genetic elements and host defence systems: guns for hire
Authors: Eugene V. Koonin, Kira S. Makarova, Yuri I. Wolf, Mart Krupovìč - Nature Reviews Genetics 2019 cited by 258
- Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features
Authors: Natalya Yutin, Sean Benler, Sergei A. Shmakov, Yuri I. Wolf, Igor Tolstoy, Mikhail Rayko, Dmitry Antipov, Pavel A. Pevzner, Eugene V. Koonin - Nature Communications 2021 cited by 181
- Archaeal Clusters of Orthologous Genes (arCOGs): An Update and Application for Analysis of Shared Features between Thermococcales, Methanococcales, and Methanobacteriales
Authors: Kira S. Makarova, Yuri I. Wolf, Eugene Koonin - Life 2015 cited by 287
- A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
Authors: Eugene V. Koonin, Natalie D. Fedorova, John D. Jackson, Aviva R. Jacobs, Dmitri M. Krylov, Kira S. Makarova, Raja Mazumder, Sergei Mekhedov, A. N. NIKOL'SKAYA, B Sridhar Rao, Igor B. Rogozin, Sergei Smirnov, Alexander V. Sorokin, Alexander V. Sverdlov, Sona Vasudevan, Yuri I. Wolf, Jodie J Yin, Darren A. Natale - Genome biology 2004 cited by 1,140
- Toward a theory of evolution as multilevel learning
Authors: Vitaly Vanchurin, Yuri I. Wolf, M. I. Katsnelson, Eugene V. Koonin - National Academy of Sciences, Proceedings of the National Academy of Sciences 2022 cited by 116
