Adam Frankish
1983–2026 年に発表
- 88
- 論文数
- 66,134
- 被引用数
- 62
- h 指数
- 84
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology72.8%
- Medicine14.8%
- Immunology and Microbiology3.5%
- Agricultural and Biological Sciences2.8%
- Neuroscience2.2%
- Computer Science1.2%
- その他2.7%
トピック
- RNA modifications and cancer5.6%
- RNA Research and Splicing5.1%
- Genomics and Chromatin Dynamics5%
- Cancer-related molecular mechanisms research4.6%
- Genomics and Phylogenetic Studies4.1%
- RNA and protein synthesis mechanisms4%
- その他71.6%
共著者
- Jennifer Harrow22
- Jonathan M. Mudge21
- Mark Diekhans21
- José M. González19
- Toby Hunt17
- Claire Davidson15
- Ruth Bennett15
- If Barnes12
- Julien Lagarde12
- Mark Gerstein12
- Carlos García-Girón11
- Paul Flicek11
- Roderic Guigó11
- Elspeth A. Bruford10
- Jyothish Bhai10
- Reham Fatima10
- Sílvia Carbonell Sala9
- Andrew Berry8
- Cristina Sisu8
- Irwin Jungreis8
- Jane E. Loveland8
- Jane Loveland8
- Konstantinos Billis8
- Alexandra Bignell7
全論文
- An integrated encyclopedia of DNA elements in the human genome
著者: Ian Dunham, Ewan Birney, Javier Herrero, Steven P. Wilder, Damian Keefe, Kathryn Beal, Paul Flicek, Nathan Johnson, Daniel Sobral, Anshul Kundaje, Serafim Batzoglou, Nadine Hussami, Sofia Kyriazopoulou-Panagiotopoulou, Max W. Libbrecht, Marc A. Schaub, Shelley F. Aldred, Patrick Collins, Nathan D. Trinklein, Carrie A. Davis, Felix Schlesinger, T Gingeras, Alex Dobin, Wei Lin, Chenghai Xue, Chris Zaleski, Michael T. Baer, Philippe Batut, Kimberly Bell, Sudipto Chakrabortty, Jörg Drenkow, Megan Fastuca, Kata Fejes-Toth, Assaf Gordon, Sonali Jha, Jonathan Preall, Kimberly Presaud, Lei-Hoon See, Huaien Wang, Gregory J. Hannon, Francis Doyle, Scott A. Tenenbaum, Charles B. Epstein, Noam Shoresh, B Bernstein, Tarjei S. Mikkelsen, Alon Goren, Oren Ram, Xiaolan Zhang, Li Wang, Robbyn Issner, Michael J. Coyne, Timothy Durham, Manching Ku, Thanh Truong, Seth Frietze, Peggy Farnham, Heather Witt, Jennifer Harrow, Timothy J. Hubbard, Felix Kokocinski, Bronwen Aken, Daniel Barrell, Gemma Barson, Andrew Berry, Alexandra Bignell, Veronika Boychenko, Claire Davidson, Gloria Despacio-Reyes, Adam Frankish, James Gilbert, José M. González, Ed Griffiths, Toby Hunt, Mike Kay, Jane Loveland, Deepa Manthravadi, Jonathan Mudge, Gaurab Mukherjee, Gary Saunders, Stephen Searle, Catherine Snow, Charlie Steward, Electra Tapanari, Laurens Wilming, Amonida Zadissa, Rajinder Kaul, Jainab Khatun, Morgan C. Giddings, John Wrobel, Brian A. Risk, Bryan R. Lajoie, Amartya Sanyal, Job Dekker, Gaurav Jain, Stephen G. Landt, M Snyder, Nick Addleman, Keith Bettinger, Alan P. Boyle, Philip Cayting - Nature 2012 被引用: 19,606
- A draft human pangenome reference
著者: Wen‐Wei Liao, Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Glenn Hickey, Shuangjia Lu, Julian Lucas, Jean Monlong, Haley Abel, Silvia Buonaiuto, Xian Chang, Haoyu Cheng, Justin Chu, Vincenza Colonna, Jordan M. Eizenga, Xiaowen Feng, Christian Fischer, Robert S. Fulton, Shilpa Garg, Cristian Groza, Andrea Guarracino, William T. Harvey, Simon Heumos, Kerstin Howe, Miten Jain, Tsung-Yu Lu, Charles Markello, Fergal J. Martin, Matthew W. Mitchell, Katherine M. Munson, Moses Njagi Mwaniki, Adam M. Novak, Hugh E. Olsen, Trevor Pesout, David Porubskỳ, Pjotr Prins, Jonas A. Sibbesen, Jouni Sirén, Chad Tomlinson, Flavia Villani, Mitchell R. Vollger, Lucinda Antonacci-Fulton, Gunjan Baid, Carl Baker, Anastasiya Belyaeva, Konstantinos Billis, Andrew Carroll, Pi-Chuan Chang, Sarah Cody, Daniel E. Cook, Robert Cook‐Deegan, Omar E. Cornejo, Mark Diekhans, Peter Ebert, Susan Fairley, Olivier Fédrigo, Adam L. Felsenfeld, Giulio Formenti, Adam Frankish, Yan Gao, Nanibaa’ A. Garrison, Carlos García Girón, Richard E. Green, Leanne Haggerty, Kendra Hoekzema, Thibaut Hourlier, Hanlee P. Ji, Eimear E. Kenny, Barbara A. Koenig, Alexey Kolesnikov, Jan O. Korbel, Jennifer Kordosky, Sergey Koren, HoJoon Lee, Alexandra P. Lewis, Hugo Magalhães, Santiago Marco‐Sola, Pierre Marijon, Ann M. Mc Cartney, Jennifer McDaniel, Jacquelyn Mountcastle, Maria Nattestad, Sergey Nurk, Nathan D. Olson, Alice B. Popejoy, Daniela Puiu, Mikko Rautiainen, Allison Regier, Arang Rhie, Samuel Sacco, Ashley D. Sanders, Valérie Schneider, Baergen I. Schultz, Kishwar Shafin, Michael W. Smith, Heidi J. Sofia, Ahmad Abou Tayoun, Françoise Thibaud‐Nissen, Francesca Floriana Tricomi ほか 19 名 - Nature 2023 被引用: 1,197
- Ensembl 2022
著者: Fiona Cunningham, James E. Allen, Jamie Allen, Jorge Álvarez-Jarreta, M Ridwan Amode, Irina M. Armean, Olanrewaju Austine-Orimoloye, Andrey G Azov, If Barnes, Ruth Bennett, Andrew Berry, Jyothish Bhai, Alexandra Bignell, Konstantinos Billis, Sanjay Boddu, Lucy Brooks, Mehrnaz Charkhchi, Carla Cummins, Luca Da Rin Fioretto, Claire Davidson, Kamalkumar Dodiya, Sarah Donaldson, Bilal El Houdaigui, Tamara El Naboulsi, Reham Fatima, Carlos García Girón, Thiago A. L. Genez, Jose Gonzalez Martinez, Cristina Guijarro-Clarke, Arthur W. Gymer, Matthew P. Hardy, Zoe Hollis, Thibaut Hourlier, Toby Hunt, Thomas Juettemann, Vinay Kaikala, Mike Kay, Ilias Lavidas, Anh Tuấn Lê, Diana Lemos, José Carlos Marugán, Shamika Mohanan, Aleena Mushtaq, Marc Naven, Denye Ogeh, Anne Parker, Andrew Parton, Malcolm Perry, Ivana Piližota, Irina Prosovetskaia, Manoj Pandian Sakthivel, Ahamed Imran Abdul Salam, Bianca M. Schmitt, Helen Schuilenburg, Dan Sheppard, José G Pérez-Silva, William Stark, Emily Steed, Kyösti Sutinen, Ranjit Sukumaran, Dulika Sumathipala, Marie‐Marthe Suner, Michał Szpak, Anja Thormann, Francesca Floriana Tricomi, David Urbina-Gómez, Andres Veidenberg, Thomas Walsh, Brandon Walts, Natalie L Willhoft, Andrea Winterbottom, Elizabeth Wass, Marc Chakiachvili, Bethany Flint, Adam Frankish, Stefano Giorgetti, Leanne Haggerty, Sarah Hunt, Garth R IIsley, Jane Loveland, Fergal J. Martin, Benjamin Moore, Jonathan M. Mudge, Matthieu Muffato, Emily Perry, Magali Ruffier, John Tate, David Thybert, Stephen J. Trevanion, Sarah Dyer, Peter W. Harrison, Kevin Howe, Andrew Yates, Daniel R. Zerbino, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2021 被引用: 2,168
- Ensembl 2023
著者: Fergal J. Martin, M Ridwan Amode, Alisha Aneja, Olanrewaju Austine-Orimoloye, Andrey G Azov, If Barnes, Arne Becker, Ruth Bennett, Andrew Berry, Jyothish Bhai, Simarpreet Kaur Bhurji, Alexandra Bignell, Sanjay Boddu, Paulo Lins, Lucy Brooks, Shashank Budhanuru Ramaraju, Mehrnaz Charkhchi, Alexander Cockburn, Luca Da Rin Fiorretto, Claire Davidson, Kamalkumar Dodiya, Sarah Donaldson, Bilal El Houdaigui, Tamara El Naboulsi, Reham Fatima, Carlos García Girón, Thiago A. L. Genez, Gurpreet S Ghattaoraya, José M. González, Cristina Guijarro-Clarke, Matthew P. Hardy, Zoe Hollis, Thibaut Hourlier, Toby Hunt, Mike Kay, Vinay Kaykala, Anh Tuấn Lê, Diana Lemos, Diego Marques‐Coelho, José Carlos Marugán, Gabriela Merino, Louisse Paola Mirabueno, Aleena Mushtaq, Syed Nakib Hossain, Denye Ogeh, Manoj Pandian Sakthivel, Anne Parker, Malcolm Perry, Ivana Piližota, Irina Prosovetskaia, José G Pérez-Silva, Ahamed Imran Abdul Salam, Nuno Saraiva-Agostinho, Helen Schuilenburg, Dan Sheppard, Swati Sinha, Botond Sipos, William Stark, Emily Steed, Ranjit Sukumaran, Dulika Sumathipala, Marie‐Marthe Suner, Likhitha Surapaneni, Kyösti Sutinen, Michał Szpak, Francesca Floriana Tricomi, David Urbina-Gómez, Andres Veidenberg, Thomas Walsh, Brandon Walts, Elizabeth Wass, Natalie L Willhoft, Jamie Allen, Jorge Álvarez-Jarreta, Marc Chakiachvili, Bethany Flint, Stefano Giorgetti, Leanne Haggerty, Garth R Ilsley, Jane Loveland, Benjamin Moore, Jonathan M. Mudge, John Tate, David Thybert, Stephen J. Trevanion, Andrea Winterbottom, Adam Frankish, Sarah Hunt, Magali Ruffier, Fiona Cunningham, Sarah Dyer, ROBERT FINN, Kevin Howe, Peter W. Harrison, Andrew Yates, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2022 被引用: 1,097
- GENCODE reference annotation for the human and mouse genomes
著者: Adam Frankish, Mark Diekhans, Anne-Maud Ferreira, Rory Johnson, Irwin Jungreis, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Joel Armstrong, If Barnes, Andrew E. Berry, Alexandra Bignell, Silvia Carbonell Sala, Jacqueline Chrast, Fiona Cunningham, Tomás Di Domenico, Sarah M. Donaldson, Ian T. Fiddes, Carlos García-Girón, Jose M. Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Toby Hunt, Osagie G. Izuogu, Julien Lagarde, Fergal J. Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Jinrui Xu, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Bronwen L. Aken, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Alexandre Reymond, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2018 被引用: 3,502
- GENCODE 2021
著者: Adam Frankish, Mark Diekhans, Irwin Jungreis, Julien Lagarde, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Joel Armstrong, If Barnes, Andrew E. Berry, Alexandra Bignell, Carles Boix, Silvia Carbonell Sala, Fiona Cunningham, Tomás Di Domenico, Sarah M. Donaldson, Ian T. Fiddes, Carlos García-Girón, Jose M. Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Kevin L. Howe, Toby Hunt, Osagie G. Izuogu, Rory Johnson, Fergal J. Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Ferriol Calvet Riera, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Maxim Y. Wolf, Jinrui Xu, Yucheng T. Yang, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2020 被引用: 1,466
- Ensembl 2024
著者: Peter W. Harrison, M Ridwan Amode, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes, Arne Becker, Ruth Bennett, Andrew Berry, Jyothish Bhai, Simarpreet Kaur Bhurji, Sanjay Boddu, Paulo Lins, Lucy Brooks, Shashank Budhanuru Ramaraju, Lahcen Campbell, Manuel Carbajo Martinez, Mehrnaz Charkhchi, Kapeel Chougule, Alexander Cockburn, Claire Davidson, Nishadi De Silva, Kamalkumar Dodiya, Sarah Donaldson, Bilal El Houdaigui, Tamara El Naboulsi, Reham Fatima, Carlos García Girón, Thiago A. L. Genez, Dionysios Grigoriadis, Gurpreet S Ghattaoraya, José M. González, Tatiana A. Gurbich, Matthew P. Hardy, Zoe Hollis, Thibaut Hourlier, Toby Hunt, Mike Kay, Vinay Kaykala, Anh Tuấn Lê, Diana Lemos, Disha Lodha, Diego Marques‐Coelho, G. Maslen, Gabriela Merino, Louisse Paola Mirabueno, Aleena Mushtaq, Syed Nakib Hossain, Denye Ogeh, Manoj Pandian Sakthivel, Anne Parker, Malcolm Perry, Ivana Piližota, Daniel Poppleton, Irina Prosovetskaia, Shriya Raj, José G Pérez-Silva, Ahamed Imran Abdul Salam, Shradha Saraf, Nuno Saraiva-Agostinho, Dan Sheppard, Swati Sinha, Botond Sipos, Vasily Sitnik, William Stark, Emily Steed, Marie‐Marthe Suner, Likhitha Surapaneni, Kyösti Sutinen, Francesca Floriana Tricomi, David Urbina-Gómez, Andres Veidenberg, Thomas Walsh, Doreen Ware, Elizabeth Wass, Natalie L Willhoft, Jamie Allen, Jorge Álvarez-Jarreta, Marc Chakiachvili, Bethany Flint, Stefano Giorgetti, Leanne Haggerty, Garth R Ilsley, Jon Keatley, Jane Loveland, Benjamin Moore, Jonathan M. Mudge, Guy Naamati, John Tate, Stephen J. Trevanion, Andrea Winterbottom, Adam Frankish, Sarah Hunt, Fiona Cunningham, Sarah Dyer, ROBERT FINN, Fergal J. Martin, Andrew Yates - Nucleic Acids Research 2023 被引用: 734
- GENCODE: The reference human genome annotation for The ENCODE Project
著者: Jennifer Harrow, Adam Frankish, José M. González, Electra Tapanari, Mark Diekhans, Felix Kokocinski, Bronwen Aken, Daniel Barrell, Amonida Zadissa, Stephen M. J. Searle, If Barnes, Alexandra Bignell, Veronika Boychenko, Toby Hunt, Mike Kay, Gaurab Mukherjee, Jeena Rajan, Gloria Despacio-Reyes, Gary Saunders, Charles A. Steward, Rachel Harte, Michael Lin, Cédric Howald, Andrea Tanzer, Thomas Derrien, Jacqueline Chrast, Nathalie Walters, Suganthi Balasubramanian, Baikang Pei, Michael L. Tress, José Manuel Rodrı́guez, Iakes Ezkurdia, Jeltje van Baren, Michael R. Brent, David Haussler, Manolis Kellis, Alfonso Valencia, Alexandre Reymond, Mark Gerstein, Roderic Guigó, Tim Hubbard - Genome Research 2012 被引用: 5,035
- An integrated map of genetic variation from 1,092 human genomes
著者: Gil A. McVean, Peter Donnelly, Anjali Gupta-Hinch, Zamin Iqbal, Iain Mathieson, Andy Rimmer, Dionysia K. Xifara, Angeliki Kerasidou, Claire Churchhouse, Olivier Delaneau, Stacey B. Gabriel, Gil McVean, David M. Altshuler, Namrata Gupta, Eric Banks, Gaurav Bhatia, Mauricio O. Carneiro, Guillermo del Angel, Giulio Genovese, Robert E. Handsaker, Robert E. Handsaker, Steven A. McCarroll, James C. Nemesh, Ryan E. Poplin, Stephen F. Schaffner, Khalid Shakir, Sharon R. Grossman, Mark A. DePristo, Ridhi Tariyal, Heng Li, Mark A. DePristo, David Reich, Matthew E. Hurles, Senduran Balasubramaniam, John Burton, Petr Danecek, Thomas M. Keane, Mark A. DePristo, Shane McCarthy, James Stalker, Michael Quail, Robert E. Handsaker, Yuan Chen, Alison J. Coffey, Vincenza Colonna, Ni Huang, Luke Jostins, Aylwyn Scally, Klaudia Walter, Yali Xue, Yujun Zhang, Ben Blackburne, Sarah J. Lindsay, Zemin Ning, Adam Frankish, Jennifer Harrow, Richard M. Durbin, Chris Tyler-Smith, Gonçalo R. Abecasis, Richard Durbin, Tom Blackwell, Fabio Busonero, Christian Fuchsberger, Goo Jun, Andrea Maschio, Eleonora Porcu, Carlo Sidore, Adrian Tan, Mary Kate Trost, Hyun Min Kang, David R. Bentley, Russell Grocock, Gonçalo R. Abecasis, Jin Yu, Zoya Kingsbury, Jin Yu, R. Keira Cheetham, Tony Cox, Michael Eberle, Lisa Murray, Richard Shaw, Aravinda Chakravarti, Andrew G. Clark, Alon Keinan, Juan L. Rodriguez-Flores, Francisco M. De La Vega, Jeremiah Degenhardt, Evan E. Eichler, Paul Flicek, Laura Clarke, Rasko Leinonen, Richard E. Smith, Xiangqun Zheng-Bradley, Kathryn Beal, Fiona Cunningham, Javier Herrero, William M. McLaren, Graham R. S. Ritchie, Jonathan Barker, Gavin Kelman ほか 263 名 - Nature 2012 被引用: 8,269
- GENCODE: reference annotation for the human and mouse genomes in 2023
著者: Adam Frankish, Silvia Carbonell Sala, Mark Diekhans, Irwin Jungreis, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Carme Arnan, If Barnes, Abhimanyu Banerjee, Ruth Bennett, Andrew E. Berry, Alexandra Bignell, Carles Boix, Ferriol Calvet Riera, Daniel Cerdán-Vélez, Fiona Cunningham, Claire Davidson, Sarah M. Donaldson, Cagatay Dursun, Reham Fatima, Stefano Giorgetti, Carlos García-Girón, Jose M. Gonzalez, Matthew Hardy, Peter W. Harrison, Thibaut Hourlier, Zoe Hollis, Toby Hunt, Benjamin James, Yunzhe Jiang, Rory Johnson, Mike P. Kay, Julien Lagarde, Fergal J. Martin, Laura Martínez Gómez, Surag Nair, Pengyu Ni, Fernando Pozo, Vivek Ramalingam, Magali Ruffier, Bianca M. Schmitt, Jacob M. Schreiber, Emily Steed, Marie-Marthe Suner, Dulika Sumathipala, Irina Sycheva, Barbara Uszczynska-Ratajczak, Elizabeth Wass, Yucheng T. Yang, Andrew D. Yates, Zahoor Zafrulla, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Anshul Kundaje, Benedict Paten, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2022 被引用: 648
- A joint NCBI and EMBL-EBI transcript set for clinical genomics and research
著者: Joannella Morales, Shashikant Pujar, Jane Loveland, Alex Astashyn, Ruth Bennett, Andrew Berry, Eric Cox, Claire Davidson, Olga Ermolaeva, Catherine M. Farrell, Reham Fatima, Laurent Gil, Tamara Goldfarb, José M. González, Diana Haddad, Matthew P. Hardy, Toby Hunt, John D. Jackson, Vinita Joardar, Mike Kay, Vamsi K. Kodali, Kelly M. McGarvey, Aoife McMahon, Jonathan M. Mudge, Daniel N. Murphy, Michael R. Murphy, Bhanu Rajput, Sanjida H Rangwala, Lillian D. Riddick, Françoise Thibaud‐Nissen, Glen Threadgold, Anjana R. Vatsan, Craig Wallin, David Webb, Paul Flicek, Ewan Birney, Kim D. Pruitt, Adam Frankish, Fiona Cunningham, Terence D. Murphy - Nature 2022 被引用: 610
- Ensembl 2021
著者: Kevin Howe, Premanand Achuthan, James E. Allen, Jamie Allen, Jorge Álvarez-Jarreta, M Ridwan Amode, Irina M. Armean, Andrey G Azov, Ruth Bennett, Jyothish Bhai, Konstantinos Billis, Sanjay Boddu, Mehrnaz Charkhchi, Carla Cummins, Luca Da Rin Fioretto, Claire Davidson, Kamalkumar Dodiya, Bilal El Houdaigui, Reham Fatima, Astrid Gall, Carlos García Girón, Tiago Grego, Cristina Guijarro-Clarke, Leanne Haggerty, Anmol Jaywant Hemrom, Thibaut Hourlier, Osagie Izuogu, Thomas Juettemann, Vinay Kaikala, Mike Kay, Ilias Lavidas, Anh Tuấn Lê, Diana Lemos, José M. González, José Carlos Marugán, Thomas Maurel, Aoife McMahon, Shamika Mohanan, Benjamin Moore, Matthieu Muffato, Denye N Oheh, Dimitrios Paraschas, Anne Parker, Andrew Parton, Irina Prosovetskaia, Manoj Pandian Sakthivel, Ahamed Imran Abdul Salam, Bianca M. Schmitt, Helen Schuilenburg, Dan Sheppard, Emily Steed, Michał Szpak, M. Szuba, Kieron Taylor, Anja Thormann, Glen Threadgold, Brandon Walts, Andrea Winterbottom, Marc Chakiachvili, Ameya Chaubal, Nishadi De Silva, Bethany Flint, Adam Frankish, Sarah Hunt, Garth R IIsley, Nicholas Langridge, Jane Loveland, Fergal J. Martin, Jonathan M. Mudge, Joanella Morales, Emily Perry, Magali Ruffier, John Tate, David Thybert, Stephen J. Trevanion, Fiona Cunningham, Andrew Yates, Daniel R. Zerbino, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2020 被引用: 1,759
- RNAcentral 2021: secondary structure integration, improved sequence search and new member databases
著者: Blake A. Sweeney, Anton I. Petrov, Carlos Eduardo Ribas, Robert D. Finn, Alex Bateman, Maciej Szymanski, Wojciech M. Karlowski, Stefan E. Seemann, Jan Gorodkin, Jamie J. Cannone, Robin Ray Gutell, Simon Kay, Steven J. Marygold, Gilberto dos Santos, Adam Frankish, Jonathan M. Mudge, Ruth Barshir, Simon Fishilevich, Patricia P. Chan, Todd M. Lowe, Ruth L. Seal, Elspeth A. Bruford, Simona Panni, Pablo Porras, Dimitra Karagkouni, Artemis G. Hatzigeorgiou, Lina Ma, Zhang Zhang, Pieter-Jan Volders, Pieter Mestdagh, Sam Griffiths-Jones, Bastian Fromm, Kevin J. Peterson, Ioanna Kalvari, Eric P. Nawrocki, Anton S. Petrov, Shuai Weng, Philia Bouchard-Bourelle, Michelle S. Scott, Lauren M. Lui, David Hoksza, Ruth C. Lovering, Barbara Kramarz, Prita Mani, Sridhar Ramachandran, Zasha Weinberg - Nucleic Acids Research, Nucleic Acids Res. 2020 被引用: 413
- Pangenome graph construction from genome alignments with Minigraph-Cactus
著者: Glenn Hickey, Jean Monlong, Jana Ebler, Adam M. Novak, Jordan M. Eizenga, Yan Gao, Haley Abel, Lucinda Antonacci-Fulton, Mobin Asri, Gunjan Baid, Carl Baker, Anastasiya Belyaeva, Konstantinos Billis, Guillaume Bourque, Silvia Buonaiuto, Andrew Carroll, Mark Chaisson, Pi-Chuan Chang, Xian Chang, Haoyu Cheng, Justin Chu, Sarah Cody, Vincenza Colonna, Daniel E. Cook, Robert Cook‐Deegan, Omar E. Cornejo, Mark Diekhans, Daniel Doerr, Peter Ebert, Jana Ebler, Evan E. Eichler, Susan Fairley, Olivier Fédrigo, Adam L. Felsenfeld, Xiaowen Feng, Christian Fischer, Paul Flicek, Giulio Formenti, Adam Frankish, Robert S. Fulton, Shilpa Garg, Erik Garrison, Nanibaa’ A. Garrison, Carlos García Girón, Richard E. Green, Cristian Groza, Andrea Guarracino, Leanne Haggerty, Ira M. Hall, William T. Harvey, Marina Haukness, David Haussler, Simon Heumos, Kendra Hoekzema, Thibaut Hourlier, Kerstin Howe, Miten Jain, Erich D. Jarvis, Hanlee P. Ji, Eimear E. Kenny, Barbara A. Koenig, Alexey Kolesnikov, Jan O. Korbel, Jennifer Kordosky, Sergey Koren, HoJoon Lee, Alexandra P. Lewis, Wen‐Wei Liao, Shuangjia Lu, Tsung-Yu Lu, Julian Lucas, Hugo Magalhães, Santiago Marco‐Sola, Pierre Marijon, Charles Markello, Tobias Marschall, Fergal J. Martin, Ann M. Mc Cartney, Jennifer McDaniel, Karen H. Miga, Matthew W. Mitchell, Jacquelyn Mountcastle, Katherine M. Munson, Moses Njagi Mwaniki, Maria Nattestad, Sergey Nurk, Hugh E. Olsen, Nathan D. Olson, Trevor Pesout, Adam M. Phillippy, Alice B. Popejoy, David Porubský, Pjotr Prins, Daniela Puiu, Mikko Rautiainen, Allison Regier, Arang Rhie, Samuel Sacco, Ashley D. Sanders, Valérie Schneider ほか 21 名 - Nature Biotechnology 2023 被引用: 306
- Standardized annotation of translated open reading frames
著者: Jonathan M. Mudge, Jorge Ruiz‐Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis, José M. González, Michele Magrane, Thomas F. Martínez, Jana Felicitas Schulz, Yucheng Yang, M. Mar Albà, Julie L. Aspden, Pavel V. Baranov, Ariel Bazzini, Elspeth A. Bruford, María Martin, Lorenzo Calviello, Anne‐Ruxandra Carvunis, Jin Chen, Juan Pablo Couso, Eric W. Deutsch, Paul Flicek, Adam Frankish, Mark Gerstein, Norbert Hübner, Nicholas T. Ingolia, Manolis Kellis, Gerben Menschaert, Robert L. Moritz, Uwe Ohler, Xavier Roucou, Alan Saghatelian, Jonathan S. Weissman, Sebastiaan van Heesch - Nature Biotechnology 2022 被引用: 250
- Ensembl 2018
著者: Daniel R. Zerbino, Premanand Achuthan, Wasiu A. Akanni, M. Ridwan Amode, Daniel Barrell, Jyothish Bhai, Konstantinos Billis, Carla A. Cummins, Astrid Gall, Carlos García-Girón, Laurent Gil, Leo Gordon, Leanne Haggerty, Erin Haskell, Thibaut Hourlier, Osagie G. Izuogu, Sophie H. Janacek, Thomas Juettemann, Jimmy Kiang To, Matthew R. Laird, Ilias Lavidas, Zhicheng Liu, Jane E. Loveland, Thomas Maurel, William M. McLaren, Benjamin Moore, Jonathan M. Mudge, Daniel N. Murphy, Victoria Newman, Michael Nuhn, Denye N. Ogeh, Chuang Kee Ong, Anne Parker, Mateus Patricio, Harpreet Singh Riat, Helen Schuilenburg, Daniel Sheppard, Helen Sparrow, Kieron R. Taylor, Anja Thormann, Alessandro Vullo, Brandon Walts, Amonida Zadissa, Adam Frankish, Sarah E. Hunt, Myrto Kostadima, Nicholas Langridge, Fergal J. Martin, Matthieu Muffato, Emily Perry, Magali Ruffier, Daniel M. Staines, Stephen J. Trevanion, Bronwen L. Aken, Fiona Cunningham, Andrew D. Yates, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2017 被引用: 2,837
- Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
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