Antonis Rokas
2000–2025 年に発表
- 179
- 論文数
- 27,434
- 被引用数
- 86
- h 指数
- 167
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology49.1%
- Agricultural and Biological Sciences19.5%
- Medicine14.3%
- Environmental Science4.3%
- Earth and Planetary Sciences3.5%
- Neuroscience3.4%
- その他5.9%
トピック
- Genomics and Phylogenetic Studies8.5%
- Genetic diversity and population structure4.2%
- Plant Pathogens and Fungal Diseases3.5%
- Mycorrhizal Fungi and Plant Interactions2.7%
- Fungal and yeast genetics research2.5%
- Fungal Biology and Applications2.3%
- その他76.3%
共著者
- Jacob L. Steenwyk53
- Chris Todd Hittinger46
- Xing‐Xing Shen45
- Xiaofan Zhou32
- Abigail L. LaBella28
- Dana A. Opulente24
- Gustavo H. Goldman24
- Yuanning Li19
- Marizeth Groenewald17
- Matthew E. Mead16
- Nicholas H. Oberlies15
- Huzefa A. Raja14
- Jennifer H. Wisecaver13
- Jacek Kominek12
- John F. Wolters11
- Sonja L. Knowles11
- Cletus P. Kurtzman10
- Laure Nicolas Annick Ries10
- Lilian Pereira Silva10
- Marie‐Claire Harrison10
- Patrícia Alves de Castro10
- Carla Gonçalves9
- Jason C. Slot9
- Leonidas Salichos9
全論文
- ClipKIT: A multiple sequence alignment trimming software for accurate phylogenomic inference
著者: Jacob L. Steenwyk, Thomas J. Buida, Yuanning Li, Xing‐Xing Shen, Antonis Rokas - PLoS Biology 2020 被引用: 739
- Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum
著者: Xing‐Xing Shen, Dana A. Opulente, Jacek Kominek, Xiaofan Zhou, Jacob L. Steenwyk, Kelly V. Buh, Max A. B. Haase, Jennifer H. Wisecaver, Mingshuang Wang, Drew T. Doering, James T. Boudouris, Rachel M. Schneider, Quinn K. Langdon, Moriya Ohkuma, Rikiya Endoh, Masako Takashima, Ri‐Ichiroh Manabe, Neža Čadež, Diego Libkind, Carlos A. Rosa, Jeremy DeVirgilio, Amanda Beth Hulfachor, Marizeth Groenewald, Cletus P. Kurtzman, Chris Todd Hittinger, Antonis Rokas - Cell 2018 被引用: 725
- A genome-scale phylogeny of the kingdom Fungi
著者: Yuanning Li, Jacob L. Steenwyk, Ying Chang, Yan Wang, Timothy Y. James, Jason Stajich, Joseph W. Spatafora, Marizeth Groenewald, Casey W. Dunn, Chris Todd Hittinger, Xing‐Xing Shen, Antonis Rokas - Current Biology 2021 被引用: 374
- The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes
著者: Dimitrios Floudas, Manfred Binder, Robert Riley, Kerrie Barry, Robert A. Blanchette, Bernard Henrissat, Ángel T. Martı́nez, Robert Otillar, Joseph W. Spatafora, Jagjit S. Yadav, Andrea Aerts, Isabelle Benoit, Alex Boyd, Alexis Carlson, Alex Copeland, Pedro M. Coutinho, Ronald P. de Vries, Patrícia Ferreira, Keisha Findley, Brian Foster, Jill Gaskell, Dylan Glotzer, Paweł Górecki, Joseph Heitman, Cedar Hesse, Chiaki Hori, Kiyohiko Igarashi, Joel A. Jurgens, Nathan Kallen, Phil Kersten, Annegret Kohler, Ursula Kües, T. K. Arun Kumar, Alan Kuo, Kurt LaButti, Luis Larrondo, Erika Lindquist, Albee Y. Ling, Vincent Lombard, Susan Lucas, Taina Lundell, Rachael Martin, David J. McLaughlin, Ingo Morgenstern, Emanuelle Morin, Claude Murat, László G. Nagy, Matt Nolan, Robin A. Ohm, Aleksandrina Patyshakuliyeva, Antonis Rokas, Francisco J. Ruiz‐Dueñas, Grzegorz Sabat, Asaf Salamov, Masahiro Samejima, Jeremy Schmutz, Jason C. Slot, Franz J. St John, Jan Stenlid, Hui Sun, Sheng Sun, Khajamohiddin Syed, Adrian Tsang, Ad Wiebenga, Darcy F. Young, Antonio G. Pisabarro, Daniel C. Eastwood, Francis Martin, Dan Cullen, Igor V. Grigoriev, David S. Hibbett - Science 2012 被引用: 1,824
- Incongruence in the phylogenomics era
著者: Jacob L. Steenwyk, Yuanning Li, Xiaofan Zhou, Xing‐Xing Shen, Antonis Rokas - Nature Reviews Genetics 2023 被引用: 242
- Evolution of the human pathogenic lifestyle in fungi
著者: Antonis Rokas - Nature Microbiology 2022 被引用: 228
- The influence of evolutionary history on human health and disease
著者: Mary Lauren Benton, Abin Abraham, Abigail L. LaBella, Patrick Abbot, Antonis Rokas, John A. Capra - Nature Reviews Genetics 2021 被引用: 303
- PhyKIT: a broadly applicable UNIX shell toolkit for processing and analyzing phylogenomic data
著者: Jacob L. Steenwyk, Thomas J. Buida, Abigail L. Labella, Yuanning Li, Xing-Xing Shen, Antonis Rokas - Bioinformatics, Bioinform. 2021 被引用: 222
- The triple helix of collagens – an ancient protein structure that enabled animal multicellularity and tissue evolution
著者: Aaron L. Fidler, Sergei P. Boudko, Antonis Rokas, Billy G. Hudson - Journal of Cell Science 2018 被引用: 219
- Comparative genomics of biotechnologically important yeasts
著者: Robert Riley, Sajeet Haridas, Kenneth H. Wolfe, Mariana Lopes, Chris Todd Hittinger, Markus Göker, Asaf Salamov, Jennifer H. Wisecaver, Tanya M. Long, Christopher H. Calvey, Andrea Aerts, Kerrie Barry, Cindy Choi, Alicia Clum, Aisling Y. Coughlan, Shweta Deshpande, Alexander Douglass, Sara J. Hanson, Hans‐Peter Klenk, Kurt LaButti, Alla Lapidus, Erika Lindquist, Anna Lipzen, Jan P. Meier‐Kolthoff, Robin A. Ohm, Robert Otillar, Jasmyn Pangilinan, Peng Yi, Antonis Rokas, Carlos A. Rosa, Carmen Scheuner, Andriy А. Sibirny, Jason C. Slot, J. Benjamin Stielow, Hui Sun, Cletus P. Kurtzman, Meredith Blackwell, Igor V. Grigoriev, Thomas W. Jeffries - National Academy of Sciences, Proceedings of the National Academy of Sciences 2016 被引用: 397
- Risk factors and outcome of pulmonary aspergillosis in critically ill coronavirus disease 2019 patients—a multinational observational study by the European Confederation of Medical Mycology
著者: Juergen Prattes, Joost Wauters, Daniele Roberto Giacobbe, Jon Salmanton‐García, Johan Maertens, Marc Bourgeois, Marijke Reynders, Lynn Rutsaert, Niels Van Regenmortel, Piet Lormans, Simon Feys, Alexander C. Reisinger, Oliver A. Cornely, Tobias Lahmer, Maricela Valerio, Laurence Delhaès, Kauser Jabeen, Joerg Steinmann, Mathilde Chamula, Matteo Bassetti, Stefan Hatzl, Riina Rautemaa‐Richardson, Philipp Koehler, Katrien Lagrou, Martin Hoenigl, Yves Debaveye, Marisa H. Miceli, Jean‐Jacques Tudesq, Gregor Paul, Robert Krause, Marina Linhofer, Jonas Frost, Peter Zechner, Matthias Kochanek, Philipp Eller, Jeffrey D. Jenks, Sara Volpi, Anne‐Pauline Bellanger, P. Lewis White, Gustavo H. Goldman, Paul Bowyer, Antonis Rokas, Sara Gago, Paolo Pelosi, Chiara Robba, Jean‐Pierre Gangneux, Cornelia Lass-Floerl, Marina Machado, Patricia Muñóz - Clinical Microbiology and Infection 2021 被引用: 230
- A genome-informed higher rank classification of the biotechnologically important fungal subphylum Saccharomycotina
著者: Marizeth Groenewald, Chris Todd Hittinger, Konstanze Bensch, Dana A. Opulente, Xing‐Xing Shen, Yàn Li, Chao Liu, Abigail L. LaBella, Xiaofan Zhou, Savitree Limtong, Sasitorn Jindamorakot, Paula Gonçalves, Vincent Robert, Kenneth H. Wolfe, Carlos A. Rosa, Teun Boekhout, Neža Čadež, Gábor Péter, José Paulo Sampaio, Marc‐André Lachance, Andrey Yurkov, Heide‐Marie Daniel, Masako Takashima, Kyria Boundy‐Mills, Diego Libkind, Keita Aoki, Takashi Sugita, Antonis Rokas - Studies in Mycology 2023 被引用: 120
- The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans
著者: Nicole King, M. Jody Westbrook, Susan L. Young, Alan Kuo, Monika Abedin, Jarrod Chapman, Stephen R. Fairclough, Uffe Hellsten, Yoh Isogai, Ivica Letunić, Michael T. Marr, David Pincus, Nicholas H. Putnam, Antonis Rokas, Kevin J. Wright, Richard Zuzow, William Dirks, Matthew C. Good, David Goodstein, Derek Lemons, Wanqing Li, Jessica B. Lyons, Andrea Morris, Scott Nichols, Daniel J. Richter, Asaf Salamov, JGI Sequencing, Peer Bork, Wendell A. Lim, Gerard Manning, W. Todd Miller, William McGinnis, Harris Shapiro, Robert Tjian, Igor V. Grigoriev, Daniel S. Rokhsar - Nature 2008 被引用: 1,172
- Contentious relationships in phylogenomic studies can be driven by a handful of genes
著者: Xing‐Xing Shen, Chris Todd Hittinger, Antonis Rokas - Nature Ecology & Evolution 2017 被引用: 586
- Toward a Fully Resolved Fungal Tree of Life
著者: Timothy Y. James, Jason Stajich, Chris Todd Hittinger, Antonis Rokas - Annual Review of Microbiology 2020 被引用: 258
- HGT is widespread in insects and contributes to male courtship in lepidopterans
著者: Yang Li, Zhiguo Liu, Chao Liu, Zheyi Shi, Lan Pang, Chuzhen Chen, Yun Chen, Ronghui Pan, Wenwu Zhou, Xue‐Xin Chen, Antonis Rokas, Jianhua Huang, Xing‐Xing Shen - Cell 2022 被引用: 166
- Inferring ancient divergences requires genes with strong phylogenetic signals
著者: Leonidas Salichos, Antonis Rokas - Nature, Nat. 2013 被引用: 697
- Biosynthetic gene clusters and the evolution of fungal chemodiversity
著者: Antonis Rokas, Matthew E. Mead, Jacob L. Steenwyk, Huzefa A. Raja, Nicholas H. Oberlies - Natural Product Reports 2020 被引用: 184
- Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts
著者: Dana A. Opulente, Abigail L. LaBella, Marie‐Claire Harrison, John F. Wolters, Chao Liu, Yonglin Li, Jacek Kominek, Jacob L. Steenwyk, Hayley R Stoneman, Jenna VanDenAvond, Caroline R. Miller, Quinn K. Langdon, Margarida Silva, Carla Gonçalves, Emily J. Ubbelohde, Yuanning Li, Kelly V. Buh, Martin Jarzyna, Max A. B. Haase, Carlos A. Rosa, Neža Čadež, Diego Libkind, Jeremy DeVirgilio, Amanda Beth Hulfachor, Cletus P. Kurtzman, José Paulo Sampaio, Paula Gonçalves, Xiaofan Zhou, Xing‐Xing Shen, Marizeth Groenewald, Antonis Rokas, Chris Todd Hittinger - Science 2024 被引用: 125
- Extensive loss of cell cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts
著者: Jacob L. Steenwyk, Dana A. Opulente, Jacek Kominek, Xing‐Xing Shen, Xiaofan Zhou, Abigail L. LaBella, Noah P. Bradley, Brandt F. Eichman, Neža Čadež, Diego Libkind, Jeremy DeVirgilio, Amanda Beth Hulfachor, Cletus P. Kurtzman, Chris Todd Hittinger, Antonis Rokas - PLoS Biology 2019 被引用: 195
- PhyloFisher: A phylogenomic package for resolving eukaryotic relationships
著者: Alexander K. Tice, David Žihala, Tomáš Pánek, Robert E. Jones, Eric D. Salomaki, Serafim Nenarokov, Fabien Burki, Marek Eliáš, Laura Eme, Andrew J. Roger, Antonis Rokas, Xing‐Xing Shen, Jürgen F. H. Strassert, Martin Kolísko, Matthew W. Brown - PLoS Biology 2021 被引用: 141
- Genetic effects on the timing of parturition and links to fetal birth weight
著者: Pol Solé-Navais, Christopher Flatley, Valgerður Steinthórsdóttir, Marc Vaudel, Julius Juodakis, Jing Chen, Triin Laisk, Abigail L. LaBella, David Westergaard, Jonas Bačelis, Ben Brumpton, Line Skotte, Maria Carolina Borges, Øyvind Helgeland, Anubha Mahajan, Matthias Wielscher, Frederick T. J. Lin, Catherine Briggs, Carol A. Wang, Gunn-Helen Moen, Robin N. Beaumont, Jonathan P. Bradfield, Abin Abraham, Guðmar Þorleifsson, Maiken E. Gabrielsen, Sisse Rye Ostrowski, Dominika Modzelewska, Ellen A. Nøhr, Elina Hyppönen, Amit Srivastava, Octavious Talbot, Catherine Allard, Scott M. Williams, Ramkumar Menon, Beverley M. Shields, Garðar Sveinbjörnsson, Huan Xu, Mads Melbye, William L. Lowe, Luigi Bouchard, Emily Oken, Ole Birger Pedersen, Daníel F. Guðbjartsson, Christian Erikstrup, Erik Sørensen, Mark I. McCarthy, Rolv T. Lie, Kari Teramo, Mikko Hallman, Thorhildur Juliusdottir, Hakon Hakonarson, Henrik Ullum, Andrew T. Hattersley, Line Sletner, Mario Merialdi, Sheryl L. Rifas‐Shiman, Þóra Steingrímsdóttir, Denise Scholtens, Christine Power, Jane West, Mette Nyegaard, John A Capra, Anne Heidi Skogholt, Per Magnus, Ole A. Andreassen, Unnur Thorsteinsdottir, Struan F.A. Grant, Elisabeth Qvigstad, Craig E. Pennell, Marie‐France Hivert, M. Geoffrey Hayes, Marjo‐Riitta Järvelin, Mark I. McCarthy, Debbie A. Lawlor, Henriette Svarre Nielsen, Reedik Mägi, Antonis Rokas, Kristian Hveem, Kāri Stefánsson, Bjarke Feenstra, Pål R. Njølstad, Louis J Muglia, Rachel M. Freathy, Stefan Johansson, Ge Zhang, Bo Jacobsson - Nature Genetics 2023 被引用: 95
- Genome-scale approaches to resolving incongruence in molecular phylogenies
著者: Antonis Rokas, Barry L. Williams, Nicole King, Sean B. Carroll - Nature 2003 被引用: 1,566
- Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes
著者: Daniel E. Neafsey, Robert M. Waterhouse, Mohammad Reza Abai, Sergey Aganezov, Max A. Alekseyev, James E. Allen, James Amon, Bruno Arcà, Peter Arensburger, Gleb N. Artemov, Lauren A. Assour, Hamidreza Basseri, Aaron Berlin, Bruce W. Birren, Stéphanie Blandin, Andrew I. Brockman, Thomas R. Burkot, Austin Burt, Clara S. Chan, Cédric Chauve, Joanna C. Chiu, Mikkel Christensen, Carlo Costantini, Victoria L M Davidson, Elena Deligianni, Tania Dottorini, Vicky Dritsou, Stacey B. Gabriel, Wamdaogo M. Guelbéogo, A. Brantley Hall, Mira Han, Thaung Hlaing, Daniel Hughes, Adam M. Jenkins, Xiaofang Jiang, Irwin Jungreis, Evdoxia G. Kakani, Maryam Kamali, Petri Kemppainen, Ryan Kennedy, Ioannis Kirmitzoglou, Lizette L. Koekemoer, Njoroge Laban, Nicholas Langridge, Mara Lawniczak, Manolis Lirakis, Neil F. Lobo, Ernesto Lowy, Robert M. MacCallum, Chunhong Mao, G. Maslen, Charles Mbogo, Jennifer B. McCarthy, Kristin Michel, Sara N. Mitchell, Wendy Moore, Katherine A. Murphy, Anastasia N. Naumenko, Tony Nolan, Eva Maria Novoa, Samantha M. O’Loughlin, Chioma Oringanje, Mohammad Ali Oshaghi, Nazzy Pakpour, Philippos Aris Papathanos, Ashley Peery, Michael Povelones, Anil Prakash, David P. Price, Ashok Rajaraman, Lisa J. Reimer, David C. Rinker, Antonis Rokas, Tanya L. Russell, N’Falé Sagnon, Maria V. Sharakhova, Terrance Shea, Felipe A. Simão, Frédéric Simard, Michel A. Slotman, Pradya Somboon, V. N. Stegniy, Cláudio J. Struchiner, Gregg W.C. Thomas, Marta Tojo, Pantelis Topalis, José M. C. Tubío, Maria Unger, John Vontas, Catherine Walton, Craig S. Wilding, Judith H. Willis, Yi-Chieh Wu, Guiyun Yan, Evgeny M. Zdobnov, Xiaofan Zhou, Flaminia Catteruccia, George K. Christophides, Frank H. Collins, Robert S. Cornman ほか 20 名 - Science 2014 被引用: 622
