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Cédric Notredame

1996–2025 年に発表

89
論文数
31,076
被引用数
52
h 指数
73
i10 指数

被引用数

Cédric Notredame の年別被引用数1955 年: 被引用 1 件1988 年: 被引用 1 件1993 年: 被引用 1 件1994 年: 被引用 1 件1996 年: 被引用 6 件1997 年: 被引用 6 件1998 年: 被引用 5 件1999 年: 被引用 18 件2000 年: 被引用 22 件2001 年: 被引用 29 件2002 年: 被引用 72 件2003 年: 被引用 118 件2004 年: 被引用 186 件2005 年: 被引用 246 件2006 年: 被引用 247 件2007 年: 被引用 243 件2008 年: 被引用 247 件2009 年: 被引用 214 件2010 年: 被引用 230 件2011 年: 被引用 292 件2012 年: 被引用 250 件2013 年: 被引用 422 件2014 年: 被引用 461 件2015 年: 被引用 508 件2016 年: 被引用 484 件2017 年: 被引用 484 件2018 年: 被引用 477 件2019 年: 被引用 1,094 件2020 年: 被引用 1,048 件2021 年: 被引用 987 件2022 年: 被引用 687 件2023 年: 被引用 467 件2024 年: 被引用 750 件2025 年: 被引用 422 件2026 年: 被引用 48 件1956〜1987 年は被引用が無いため表示していません1989〜1992 年は被引用が無いため表示していません1995 年は被引用が無いため表示していません

引用元

国・地域

この著者を引用した国・地域の世界地図アメリカ合衆国: 引用元論文 3,711 件、この内訳の 23.4%中国: 引用元論文 1,690 件、この内訳の 10.7%イギリス: 引用元論文 1,225 件、この内訳の 7.7%ドイツ: 引用元論文 1,112 件、この内訳の 7%フランス: 引用元論文 679 件、この内訳の 4.3%スペイン: 引用元論文 672 件、この内訳の 4.2%カナダ: 引用元論文 507 件、この内訳の 3.2%オーストラリア: 引用元論文 480 件、この内訳の 3%イタリア: 引用元論文 446 件、この内訳の 2.8%スイス: 引用元論文 385 件、この内訳の 2.4%日本: 引用元論文 341 件、この内訳の 2.2%スウェーデン: 引用元論文 303 件、この内訳の 1.9%
0%23.4%その他 27.2%

機関

分野

  • Biochemistry, Genetics and Molecular Biology68.8%
  • Medicine8.9%
  • Agricultural and Biological Sciences5.7%
  • Computer Science4.3%
  • Immunology and Microbiology3%
  • Decision Sciences2.2%
  • その他7.1%

トピック

  • Cancer-related molecular mechanisms research8.5%
  • Genomics and Phylogenetic Studies7.4%
  • RNA modifications and cancer5.6%
  • RNA Research and Splicing4.8%
  • RNA and protein synthesis mechanisms3.4%
  • Circular RNAs in diseases2%
  • その他68.3%

共著者

全論文

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  1. Nextflow enables reproducible computational workflows

    著者: Paolo Di Tommaso, Maria Chatzou, Evan Floden, Pablo Prieto Barja, Emilio Palumbo, Cédric Notredame - Nature Biotechnology 2017 被引用: 4,243

  2. The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

    著者: Thomas Derrien, Rory Johnson, Giovanni Bussotti, Andrea Tanzer, Sarah Djebali, Hagen Tilgner, Grégory Guernec, David Martı́n, Angelika Merkel, David G. Knowles, Julien Lagarde, Lavanya Veeravalli, Xiaoan Ruan, Yijun Ruan, Timo Lassmann, Piero Carninci, James Brown, Leonard Lipovich, José M. González, Mark Thomas, Carrie Davis, Ramin Shiekhattar, T Gingeras, Tim Hubbard, Cédric Notredame, Jennifer Harrow, Roderic Guigó - Genome Research 2012 被引用: 5,217

  3. T-coffee: a novel method for fast and accurate multiple sequence alignment 1 1Edited by J. Thornton

    著者: Cédric Notredame, Desmond G. Higgins, Jaap Heringa - Journal of Molecular Biology 2000 被引用: 7,058

  4. A comparative encyclopedia of DNA elements in the mouse genome

    著者: Feng Yue, Yong Cheng, Alessandra Breschi, Jeff Vierstra, Wei-Sheng Wu, Tyrone Ryba, Richard Sandstrom, Zhihai Ma, Carrie Davis, Benjamin D. Pope, Yin Shen, Dmitri D. Pervouchine, Sarah Djebali, Robert E. Thurman, Rajinder Kaul, Eric Rynes, Anthony Kirilusha, Georgi K. Marinov, Brian A. Williams, Diane Trout, Henry Amrhein, Katherine Fisher-Aylor, Igor Antoshechkin, Gilberto DeSalvo, Lei-Hoon See, Meagan Fastuca, Jörg Drenkow, Chris Zaleski, Alexander Dobin, Pablo Prieto, Julien Lagarde, Giovanni Bussotti, Andrea Tanzer, Olgert Denas, Kanwei Li, M. A. Bender, Miaohua Zhang, Rachel Byron, Mark Groudine, David McCleary, Long Pham, Zhen Ye, Samantha Kuan, Lee Edsall, Yi-Chieh Wu, Matthew D. Rasmussen, Mukul S. Bansal, Manolis Kellis, Cheryl A. Keller, Christapher S. Morrissey, Tejaswini Mishra, Deepti Jain, Nergiz Doğan, Robert S. Harris, Philip Cayting, Trupti Kawli, Alan P. Boyle, Ghia Euskirchen, Anshul Kundaje, Shin Lin, Yiing Lin, Camden Jansen, Venkat S. Malladi, Melissa Cline, Drew T. Erickson, Vanessa M. Kirkup, Katrina Learned, Cricket A. Sloan, Kate R. Rosenbloom, Beatriz Lacerda de Sousa, Kathryn Beal, Miguel Pignatelli, Paul Flicek, Jin Lian, Tamer Kahveci, Dongwon Lee, W. James Kent, Miguel Ramalho Santos, Javier Herrero, Cédric Notredame, Audra Johnson, Shinny Vong, Kristen Lee, Daniel Bates, Fidencio Neri, Morgan Diegel, Theresa K. Canfield, Peter J. Sabo, Matthew S. Wilken, Thomas A. Reh, Erika Giste, Anthony Shafer, Tanya Kutyavin, Eric Haugen, Douglas Dunn, Alex Reynolds, Shane Neph, Richard Humbert, R. Scott Hansen, Marella de Bruijn ほか 37 名 - Nature 2014 被引用: 1,949

  5. T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension

    著者: Paolo Di Tommaso, Sébastien Moretti, Ioannis Xenarios, Miquel Orobitg, Alberto Montanyola, Jia-Ming Chang, Jean-François Taly, Cédric Notredame - Nucleic Acids Research, Nucleic Acids Res. 2011 被引用: 1,230

  6. Multiple sequence alignment modeling: methods and applications

    著者: Maria Chatzou, Cedrik Magis, Jia-Ming Chang, Carsten Kemena, Giovanni Bussotti, Ionas Erb, Cédric Notredame - Briefings in Bioinformatics, Briefings Bioinform. 2015 被引用: 245

  7. Long Noncoding RNAs with Enhancer-like Function in Human Cells

    著者: Ulf Andersson Ørom, Thomas Derrien, Malte Beringer, Kiranmai Gumireddy, Alessandro Gardini, Giovanni Bussotti, Fan Lai, Matthias Zytnicki, Cédric Notredame, Qihong Huang, Roderic Guigò, Ramin Shiekhattar - Cell 2010 被引用: 1,768

  8. Epistasis as the primary factor in molecular evolution

    著者: Michael S. Breen, Carsten Kemena, Peter K. Vlasov, Cédric Notredame, Fyodor A. Kondrashov - Nature, Nat. 2012 被引用: 400

  9. Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

    著者: Leif Andersson, Alan Archibald, C. D. K. Bottema, Rüdiger Bräuning, Shane C. Burgess, Dave W Burt, Eduardo Casas, Hans H. Cheng, Laura Clarke, Christine Couldrey, Brian P. Dalrymple, Christine G. Elsik, Sylvain Foissac, Elisabetta Giuffra, Martien A. M. Groenen, Ben J. Hayes, LuSheng S Huang, Hassan Khatib, James Kijas, Heebal Kim, Joan K. Lunney, Fiona McCarthy, John C. McEwan, S. S. Moore, Bindu Nanduri, Cédric Notredame, Yniv Palti, Graham Plastow, James M. Reecy, G. A. Rohrer, Elena Sarropoulou, Carl J. Schmidt, Jeffrey T. Silverstein, Ross L. Tellam, Michèle Tixier-Boichard, Gwenola Tosser‐Klopp, Christopher K. Tuggle, Johanna Vilkki, Stephen N. White, Shuhong Zhao, Huaijun Zhou - Genome Biology 2015 被引用: 402

  10. CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis

    著者: Samir Ounzain, Rudi Micheletti, Carme Arnan, Isabelle Plaisance, Dario Cecchi, Blanche Schroen, Ferrán Reverter, Michael Alexanian, Christine R. Gonzales, Shi‐Yan Ng, Giovanni Bussotti, Iole Pezzuto, Cédric Notredame, Stéphane Heymans, Roderic Guigó, Rory Johnson, Thierry Pedrazzini - Journal of Molecular and Cellular Cardiology 2015 被引用: 292

  11. Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx

    著者: Federico Abascal, André Corvelo, Fernando Cruz, José Luis Villanueva‐Cañas, Anna Vlasova, Marina Marcet‐Houben, Begoña Martínez‐Cruz, Jade Yu Cheng, Pablo Prieto, Vı́ctor Quesada, Javier Quilez, Gang Li, F. García, Miriam Rubio-Camarillo, Leonor Frías, Paolo Ribeca, Salvador Capella-Gutiérrez, J. M. Rodríguez, Francisco Câmara Ferreira, Ernesto Lowy, Luca Cozzuto, Ionas Erb, Michael L. Tress, Jose L. Rodriguez-Ales, Jorge Ruiz‐Orera, Ferrán Reverter, Mireia Casas‐Marce, Laura García-España Soriano, Javier R. Arango, Sophia Derdak, Beatriz Galán, Julie Blanc, Marta Gut, Belén Lorente-Galdós, Marta Andrés-Nieto, Carlos López-Otı́n, Alfonso Valencia, Marta Gut, José L. Garcı́a, Roderic Guigó, William J. Murphy, Aurora Ruiz‐Herrera, Tomàs Marquès‐Bonet, Guglielmo Roma, Cédric Notredame, Thomas Mailund, M. Mar Albà, Toni Gabaldón, Tyler Alioto, José A. Godoy - Genome biology 2016 被引用: 228

  12. TCS: A New Multiple Sequence Alignment Reliability Measure to Estimate Alignment Accuracy and Improve Phylogenetic Tree Reconstruction

    著者: Jia‐Ming Chang, Paolo Di Tommaso, Cédric Notredame - Molecular Biology and Evolution 2014 被引用: 227

  13. AMPA: an automated web server for prediction of protein antimicrobial regions

    著者: Marc Torrent, Paolo Di Tommaso, David Pulido, Victòria M. Nogués, Cédric Notredame, Ester Boix, David Andreu - Bioinformatics, Bioinform. 2011 被引用: 171

  14. Empowering bioinformatics communities with Nextflow and nf-core

    著者: Björn E. Langer, Andreia J. Amaral, Marie-Odile Baudement, Franziska Bonath, Mathieu Charles, Praveen Chitneedi, Emily L. Clark, Paolo Di Tommaso, Sarah Djebali, Philip Ewels, Sonia E Eynard, James A. Fellows Yates, Daniel Fischer, Evan Floden, Sylvain Foissac, Gisela Gabernet, M. Garcia, Gareth Gillard, Manu Kumar Gundappa, Cervin Guyomar, Christopher Hakkaart, Friederike Hanssen, Peter W. Harrison, Matthias Hörtenhuber, Cyril Kurylo, Christa Kühn, Sandrine Lagarrigue, Delphine Lallias, Daniel J. Macqueen, E. Miller, Júlia Mir-Pedrol, Gabriel Costa Monteiro Moreira, Sven Nahnsen, Harshil Patel, Alexander Peltzer, Frédérique Pitel, Yuliaxis Ramayo‐Caldas, Marcel da Câmara Ribeiro-Dantas, Dominique Rocha, Mazdak Salavati, Alexey Sokolov, Jose Espinosa‐Carrasco, Cédric Notredame, the nf-core community. - 2024 被引用: 25

  15. Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee

    著者: Fabrice Armougom, Sébastien Moretti, Olivier Poirot, Stéphane Audic, Pierre Dumas, Basile Schaeli, Vladimir Keduas, Cédric Notredame - Nucleic Acids Research, Nucleic Acids Res. 2006 被引用: 520

  16. 1. Multichannel Sequence Analysis Applied to Social Science Data

    著者: Jacques‐Antoine Gauthier, Éric Widmer, Philipp Bücher, Cédric Notredame - Sociological Methodology 2010 被引用: 254

  17. Highly significant improvement of protein sequence alignments with AlphaFold2

    著者: Athanasios Baltzis, Leila Mansouri, Suzanne Jin, Björn E. Langer, Ionas Erb, Cédric Notredame - Bioinformatics, Bioinform. 2022 被引用: 42

  18. 3DCoffee: Combining Protein Sequences and Structures within Multiple Sequence Alignments

    著者: Órla O’Sullivan, Karsten Suhre, Chantal Abergel, Desmond G. Higgins, Cédric Notredame - Journal of Molecular Biology 2004 被引用: 322

  19. Upcoming challenges for multiple sequence alignment methods in the high-throughput era

    著者: Carsten Kemena, Cédric Notredame - Bioinformatics, Bioinform. 2009 被引用: 236

  20. Recent Evolutions of Multiple Sequence Alignment Algorithms

    著者: Cédric Notredame - PLoS Computational Biology, PLoS Comput. Biol. 2007 被引用: 222

  21. Alignathon: a competitive assessment of whole-genome alignment methods

    著者: Dent Earl, Ngan Nguyen, Glenn Hickey, Robert S. Harris, Stephen Fitzgerald, Kathryn Beal, Igor Seledtsov, В. В. Молодцов, Brian J. Raney, Hiram Clawson, Jaebum Kim, Carsten Kemena, Jia‐Ming Chang, Ionas Erb, Alexander Poliakov, Minmei Hou, Javier Herrero, William Kent, Victor Solovyev, Aaron E. Darling, Jian Ma, Cédric Notredame, Michael Brudno, Inna Dubchak, David Haussler, Benedict Paten - Genome Research 2014 被引用: 131

  22. Haplotype selection as an adaptive mechanism in the protozoan pathogen Leishmania donovani

    著者: Pablo Prieto Barja, Pascale Pescher, Giovanni Bussotti, Franck Dumetz, Hideo Imamura, Darek Kedra, Malgorzata A. Domagalska, Victor Chaumeau, Heinz Himmelbauer, Michel Pagès, Yvon Sterkers, Jean‐Claude Dujardin, Cédric Notredame, Gérald F. Späth - Nature Ecology & Evolution 2017 被引用: 130

  23. The iRMSD: a local measure of sequence alignment accuracy using structural information

    著者: Fabrice Armougom, Sébastien Moretti, Vladimir Keduas, Cédric Notredame - Bioinformatics, ISMB (Supplement of Bioinformatics) 2006 被引用: 53

  24. Large multiple sequence alignments with a root-to-leaf regressive method

    著者: Edgar Garriga Nogales, Paolo Di Tommaso, Cedrik Magis, Ionas Erb, Leila Mansouri, Athanasios Baltzis, Hafid Laayouni, Fyodor A. Kondrashov, Evan Floden, Cédric Notredame - Nature Biotechnology 2019 被引用: 37