Daniel C. Koboldt
2007–2024 年に発表
- 66
- 論文数
- 38,295
- 被引用数
- 44
- h 指数
- 62
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology48.7%
- Medicine42%
- Immunology and Microbiology3.3%
- Agricultural and Biological Sciences1.4%
- Neuroscience1.2%
- Computer Science1.1%
- その他2.3%
トピック
- Cancer Genomics and Diagnostics7.5%
- Glioma Diagnosis and Treatment3.8%
- Acute Myeloid Leukemia Research3.7%
- Epigenetics and DNA Methylation3.1%
- RNA modifications and cancer2.2%
- Genomics and Phylogenetic Studies2.1%
- その他77.6%
共著者
- Richard K. Wilson27
- Elaine R. Mardis24
- David E. Larson22
- Li Ding20
- Robert S. Fulton18
- Michael D. McLellan15
- Vincent Magrini14
- Ken Chen11
- David J. Dooling10
- Qunyuan Zhang10
- Heather K. Schmidt9
- Joshua F. McMichael9
- Katherine E. Miller9
- Michael C. Wendl9
- Sean McGrath9
- Timothy J. Ley8
- Catherine E. Cottrell7
- Christopher A. Miller7
- Christopher Harris7
- Dong Shen7
- Peter White7
- Anthony R. Miller6
- Benjamin Kelly6
- Cyriac Kandoth6
全論文
- Comprehensive genomic characterization defines human glioblastoma genes and core pathways
著者: Roger E. McLendon, D D Bigner, Allan H. Friedman, Erwin G. Van Meir, Gena M. Mastrogianakis, Jeffrey J. Olson, Daniel J. Brat, Tom Mikkelsen, Norman L. Lehman, Ken Aldape, W.K. Alfred Yung, Oliver Bögler, Scott Vandenberg, Mitchel S. Berger, Michael D. Prados, Donna M. Muzny, Margaret Morgan, Stephen W. Scherer, Aniko Sabo, Lynn Nazareth, Lora Lewis, Otis Hall, Yiming Zhu, Yanru Ren, Omar Alvi, Jiqiang Yao, Alicia Hawes, Shalini N. Jhangiani, Gerald Fowler, Anthony San Lucas, Christie Kovar, Andrew Cree, Huyen Dinh, Jireh Santibanez, Vandita Joshi, Manuel L. Gonzalez‐Garay, Christopher A. Miller, Aleksandar Milosavljevic, David A. Wheeler, Richard A. Gibbs, L A Donehower, Kristian Cibulskis, Carrie Sougnez, Tim Fennell, Scott Mahan, Jane Wilkinson, Liuda Ziaugra, Robert C. Onofrio, Toby Bloom, Robert Nicol, Kristin Ardlie, Jennifer Baldwin, Stacey Gabriel, Eric S. Lander, Gad Getz, Wendy Winckler, Roel G.W. Verhaak, Michael S. Lawrence, Michael O’Kelly, Jim Robinson, Gabriele Alexe, Rameen Beroukhim, Scott L. Carter, Derek Y. Chiang, Josh Gould, Supriya Gupta, Josh Korn, Craig H. Mermel, Jill P. Mesirov, Stefano Monti, Huy Nguyen, Melissa Parkin, Michael Reich, Nicolas Stransky, Barbara A. Weir, Levi A. Garraway, Todd R. Golub, Matthew Meyerson, Jun Li, Robert S. Fulton, Michael D. McLellan, John Wallis, David E. Larson, Xiaoqi Shi, Rachel M. Abbott, Lucinda Fulton, Ken Chen, Daniel C. Koboldt, Michael C. Wendl, Rick Meyer, Yuzhu Tang, Ling Lin, John R. Osborne, Brian H. Dunford-Shore, Tracie L. Miner, Kim D. Delehaunty, Chris Markovic, G.M. Swift, William Courtney, Craig Pohl - Nature 2008 被引用: 7,856
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
著者: Daniel C. Koboldt, Qunyuan Zhang, David E. Larson, Dong Shen, Michael D. McLellan, Ling Lin, Christopher A. Miller, Elaine R. Mardis, Li Ding, Richard K. Wilson - Genome Research 2012 被引用: 5,323
- Cancer exome analysis reveals a T-cell-dependent mechanism of cancer immunoediting
著者: Hirokazu Matsushita, Matthew D. Vesely, Daniel C. Koboldt, Charles G. Rickert, Ravindra Uppaluri, Vincent Magrini, Cora D. Arthur, J. Michael White, Yee-Shiuan Chen, Lauren Shea, Jasreet Hundal, Michael C. Wendl, Ryan Demeter, Todd Wylie, James P. Allison, Mark J. Smyth, Lloyd J. Old, Elaine R. Mardis, Robert D. Schreiber - Nature 2012 被引用: 1,297
- Best practices for variant calling in clinical sequencing
著者: Daniel C. Koboldt - Genome Medicine 2020 被引用: 411
- VarScan: variant detection in massively parallel sequencing of individual and pooled samples
著者: Daniel C. Koboldt, Ken Chen, Todd Wylie, David E. Larson, Michael D. McLellan, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Li Ding - Bioinformatics, Bioinform. 2009 被引用: 1,427
- DNMT3A Mutations in Acute Myeloid Leukemia
著者: Timothy J. Ley, Li Ding, Matthew J. Walter, Michael D. McLellan, Tamara Lamprecht, David E. Larson, Cyriac Kandoth, Jacqueline E. Payton, Jack Baty, John S. Welch, Christopher Harris, Cheryl F. Lichti, R. Reid Townsend, Robert S. Fulton, David J. Dooling, Daniel C. Koboldt, Heather K. Schmidt, Qunyuan Zhang, John R. Osborne, Ling Lin, Michelle D. O’Laughlin, Joshua F. McMichael, Kim D. Delehaunty, Sean McGrath, Lucinda A. Fulton, Vincent Magrini, Tammi L. Vickery, Jasreet Hundal, Lisa L. Cook, Joshua J. Conyers, Gary W. Swift, Jerry P. Reed, Patricia A. Alldredge, Todd Wylie, Jason Walker, Joelle Kalicki, Mark A. Watson, Sharon E. Heath, William D. Shannon, Nobish Varghese, Rakesh Nagarajan, Peter Westervelt, Michael H. Tomasson, Daniel C. Link, Timothy A. Graubert, John F. DiPersio, Elaine R. Mardis, Richard K. Wilson - New England Journal of Medicine 2010 被引用: 1,980
- Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing
著者: Li Ding, Timothy J. Ley, David E. Larson, Christopher A. Miller, Daniel C. Koboldt, John S. Welch, Julie Ritchey, Margaret A. Young, Tamara Lamprecht, Michael D. McLellan, Joshua F. McMichael, John W. Wallis, Charles Lu, Dong Shen, Christopher Harris, David J. Dooling, Robert S. Fulton, Lucinda Fulton, Ken Chen, Heather K. Schmidt, Joelle Kalicki-Veizer, Vincent Magrini, Lisa Cook, Sean McGrath, Tammi L. Vickery, Michael C. Wendl, Sharon E. Heath, Mark A. Watson, Daniel C. Link, Michael H. Tomasson, William D. Shannon, Jacqueline E. Payton, Shashikant Kulkarni, Peter Westervelt, Matthew J. Walter, Timothy A. Graubert, Elaine R. Mardis, Richard K. Wilson, John F. DiPersio - Nature 2012 被引用: 2,027
- Recurring Mutations Found by Sequencing an Acute Myeloid Leukemia Genome
著者: Elaine R. Mardis, Li Ding, David J. Dooling, David E. Larson, Michael D. McLellan, Ken Chen, Daniel C. Koboldt, Robert S. Fulton, Kim D. Delehaunty, Sean McGrath, Lucinda A. Fulton, Devin P. Locke, Vincent Magrini, Rachel M. Abbott, Tammi L. Vickery, Jerry S. Reed, Jody S. Robinson, Todd Wylie, Scott M. Smith, Lynn K. Carmichael, James M. Eldred, Christopher Harris, Jason Walker, Joshua B. Peck, Feiyu Du, Adam F. Dukes, Gabriel E. Sanderson, Anthony M. Brummett, Eric M. Clark, Joshua F. McMichael, Rick Meyer, Jonathan K. Schindler, Craig Pohl, John W. Wallis, Xiaoqi Shi, Ling Lin, Heather K. Schmidt, Yuzhu Tang, Carrie A. Haipek, Madeline E. Wiechert, Jolynda V. Ivy, Joelle Kalicki, Glendoria Elliott, Rhonda E. Ries, Jacqueline E. Payton, Peter Westervelt, Michael H. Tomasson, Mark A. Watson, Jack Baty, Sharon E. Heath, William D. Shannon, Rakesh Nagarajan, Daniel C. Link, Matthew J. Walter, Timothy A. Graubert, John F. DiPersio, Richard K. Wilson, Timothy J. Ley - New England Journal of Medicine 2009 被引用: 2,226
- Activating HER2 Mutations in HER2 Gene Amplification Negative Breast Cancer
著者: Ron Bose, Shyam M. Kavuri, Adam C. Searleman, Wei Shen, Dong Shen, Daniel C. Koboldt, John Monsey, Nicholas Goel, Adam B. Aronson, Shunqiang Li, X. Cynthia, Li Ding, Elaine R. Mardis, Matthew J. Ellis - Cancer Discovery 2012 被引用: 880
- Somatic mutations affect key pathways in lung adenocarcinoma
著者: Li Ding, Gad Getz, David A. Wheeler, Elaine R. Mardis, Michael D. McLellan, Kristian Cibulskis, Carrie Sougnez, Heidi Greulich, Donna M. Muzny, Margaret Morgan, Lucinda Fulton, Robert S. Fulton, Qunyuan Zhang, Michael C. Wendl, Michael S. Lawrence, David E. Larson, Ken Chen, David J. Dooling, Aniko Sabo, Alicia Hawes, Hua Shen, Shalini N. Jhangiani, Lora Lewis, Otis Hall, Yiming Zhu, Tittu Mathew, Yanru Ren, Jiqiang Yao, Steven E. Scherer, Kerstin Clerc, Ginger Metcalf, Brian Ng, Aleksandar Milosavljevic, Manuel L. Gonzalez‐Garay, John R. Osborne, Rick Meyer, Xiaoqi Shi, Yuzhu Tang, Daniel C. Koboldt, Ling Lin, Rachel M. Abbott, Tracie L. Miner, Craig Pohl, Ginger Fewell, Carrie A. Haipek, Heather K. Schmidt, Brian H. Dunford-Shore, Aldi T. Kraja, Seth D. Crosby, Christopher S. Sawyer, Tammi L. Vickery, Sacha N Sander, Jody S. Robinson, Wendy Winckler, Jennifer Baldwin, Lucian R. Chirieac, Amit Dutt, Tim Fennell, Megan Hanna, Bruce E. Johnson, Robert C. Onofrio, Roman K. Thomas, Giovanni Tonon, Barbara A. Weir, Xiao‐Jun Zhao, Liuda Ziaugra, Michael C. Zody, Thomas J. Giordano, Mark B. Orringer, Jack A. Roth, Margaret R. Spitz, Ignacio I. Wistuba, Bradley A. Ozenberger, Peter J. Good, Andrew C. Chang, David G. Beer, Mark A. Watson, Marc Ladanyi, Stephen Broderick, Akihiko Yoshizawa, William D. Travis, William Pao, Michael A. Province, George M. Weinstock, Harold Varmus, Stacey Gabriel, Eric S. Lander, Richard A. Gibbs, Matthew Meyerson, Richard K. Wilson - Nature 2008 被引用: 2,750
- The Origin and Evolution of Mutations in Acute Myeloid Leukemia
著者: John S. Welch, Timothy J. Ley, Daniel C. Link, Christopher A. Miller, David E. Larson, Daniel C. Koboldt, Lukas D. Wartman, Tamara Lamprecht, Fulu Liu, Jun Xia, Cyriac Kandoth, Robert S. Fulton, Michael D. McLellan, David J. Dooling, John W. Wallis, Ken Chen, Christopher Harris, Heather K. Schmidt, Joelle Kalicki-Veizer, Charles Lu, Qunyuan Zhang, Ling Lin, Michelle D. O’Laughlin, Joshua F. McMichael, Kim D. Delehaunty, Lucinda A. Fulton, Vincent Magrini, Sean McGrath, Ryan Demeter, Tammi L. Vickery, Jasreet Hundal, Lisa L. Cook, Gary W. Swift, Jerry P. Reed, Patricia A. Alldredge, Todd Wylie, Jason Walker, Mark A. Watson, Sharon E. Heath, William D. Shannon, Nobish Varghese, Rakesh Nagarajan, Jacqueline E. Payton, Jack Baty, Shashikant Kulkarni, Jeffery M. Klco, Michael H. Tomasson, Peter Westervelt, Matthew J. Walter, Timothy A. Graubert, John F. DiPersio, Li Ding, Elaine R. Mardis, Richard K. Wilson - Cell 2012 被引用: 1,576
- The Next-Generation Sequencing Revolution and Its Impact on Genomics
著者: Daniel C. Koboldt, Karyn Meltz Steinberg, David E. Larson, Richard K. Wilson, Elaine R. Mardis - Cell 2013 被引用: 1,056
- SomaticSniper: identification of somatic point mutations in whole genome sequencing data
著者: David E. Larson, Christopher C. Harris, Ken Chen, Daniel C. Koboldt, Travis E. Abbott, David J. Dooling, Timothy J. Ley, Elaine R. Mardis, Richard K. Wilson, Li Ding - Bioinformatics, Bioinform. 2011 被引用: 693
- MuSiC: Identifying mutational significance in cancer genomes
著者: Nathan D. Dees, Qunyuan Zhang, Cyriac Kandoth, Michael C. Wendl, William Schierding, Daniel C. Koboldt, Thomas B. Mooney, Matthew B. Callaway, David J. Dooling, Elaine R. Mardis, Richard K. Wilson, Li Ding - Genome Research 2012 被引用: 740
- Whole-genome analysis informs breast cancer response to aromatase inhibition
著者: Matthew J. Ellis, Li Ding, Dong Shen, Jingqin Luo, Vera J. Suman, John W. Wallis, Brian Andrew Van Tine, Jeremy Hoog, Reece Goiffon, Theodore C. Goldstein, Sam Ng, Lin Li, Robert J. Crowder, Jacqueline Snider, Karla V. Ballman, Jason D. Weber, Ken Chen, Daniel C. Koboldt, Cyriac Kandoth, William Schierding, Joshua F. McMichael, Christopher A. Miller, Charles Lu, Christopher Harris, Michael D. McLellan, Michael C. Wendl, Katherine DeSchryver, D. Craig Allred, Laura J. Esserman, Gary Unzeitig, Julie A. Margenthaler, Gildy V. Babiera, P. Kelly Marcom, J. Michael Guenther, Marilyn Leitch, Kelly K. Hunt, John A. Olson, Tao Yu, Christopher A. Maher, Lucinda Fulton, Robert S. Fulton, Michelle Harrison, Ben Oberkfell, Feiyu Du, Ryan Demeter, Tammi L. Vickery, Adnan Elhammali, Helen Piwnica‐Worms, Sandra McDonald, Mark A. Watson, David J. Dooling, David M. Ota, Li-Wei Chang, Ron Bose, Timothy J. Ley, David Piwnica‐Worms, Joshua M. Stuart, Richard K. Wilson, Elaine R. Mardis - Nature 2012 被引用: 1,035
- Recurrent mutations in the U2AF1 splicing factor in myelodysplastic syndromes
著者: Timothy A. Graubert, Dong Shen, Li Ding, Theresa Okeyo-Owuor, Cara L Lunn, Jin Shao, Kilannin Krysiak, Christopher Harris, Daniel C. Koboldt, David E. Larson, Michael D. McLellan, David J. Dooling, Rachel M. Abbott, Robert S. Fulton, Heather K. Schmidt, Joelle Kalicki-Veizer, Michelle D. O’Laughlin, Marcus Grillot, Jack Baty, Sharon E. Heath, John L. Frater, Talat Nasim, Daniel C. Link, Michael H. Tomasson, Peter Westervelt, John F. DiPersio, Elaine R. Mardis, Timothy J. Ley, Richard K. Wilson, Matthew J. Walter - Nature Genetics 2011 被引用: 582
- The Alzheimer's Disease Sequencing Project: Study design and sample selection
著者: Gary W. Beecham, Joshua C. Bis, Eden R. Martin, Seung Hoan Choi, Anita L. DeStefano, Cornelia M. van Duijn, Myriam Fornage, S.B. Gabriel, Daniel C. Koboldt, David E. Larson, A.C. Naj, Bruce M. Psaty, William Salerno, William S. Bush, Tatiana Foroud, Ellen M. Wijsman, Lindsay A. Farrer, Alison Goate, Jonathan L. Haines, Margaret A. Pericak‐Vance, Eric Boerwinkle, Richard Mayeux, Sudha Seshadri, Gerard D. Schellenberg - Neurology Genetics 2017 被引用: 237
- Patterns and functional implications of rare germline variants across 12 cancer types
著者: Charles Lu, Mingchao Xie, Michael C. Wendl, Jiayin Wang, Michael D. McLellan, Mark D.M. Leiserson, Kuan‐lin Huang, Matthew A. Wyczalkowski, Reyka G. Jayasinghe, Tapahsama Banerjee, Jie Ning, Piyush Tripathi, Qunyuan Zhang, Beifang Niu, Kai Ye, Heather K. Schmidt, Robert S. Fulton, Joshua F. McMichael, Prag Batra, Cyriac Kandoth, Maheetha Bharadwaj, Daniel C. Koboldt, Christopher A. Miller, Krishna Kanchi, James M. Eldred, David E. Larson, John S. Welch, Ming You, Bradley A. Ozenberger, Ramaswamy Govindan, Matthew J. Walter, Matthew J. Ellis, Elaine R. Mardis, Timothy A. Graubert, John F. DiPersio, Timothy J. Ley, Richard K. Wilson, Paul J. Goodfellow, Benjamin J. Raphael, Feng Chen, Kimberly J. Johnson, Jeffrey D. Parvin, Li Ding - Nature Communications 2015 被引用: 313
- Genome remodelling in a basal-like breast cancer metastasis and xenograft
著者: Li Ding, Matthew J. Ellis, Shunqiang Li, David E. Larson, Ken Chen, John W. Wallis, Christopher Harris, Michael D. McLellan, Robert S. Fulton, Lucinda Fulton, Rachel M. Abbott, Jeremy Hoog, David J. Dooling, Daniel C. Koboldt, Heather K. Schmidt, Joelle Kalicki, Qunyuan Zhang, Lei Chen, Ling Lin, Michael C. Wendl, Joshua F. McMichael, Vincent Magrini, Lisa Cook, Sean McGrath, Tammi L. Vickery, Elizabeth L. Appelbaum, Katherine DeSchryver, Sherri R. Davies, Therese Guintoli, Lin Li, Robert J. Crowder, Tao Yu, Jacqueline Snider, Scott M. Smith, Adam F. Dukes, Gabriel E. Sanderson, Craig Pohl, Kim D. Delehaunty, Catrina C. Fronick, Kimberley A. Pape, Jerry S. Reed, Jody S. Robinson, Jennifer S. Hodges, William Schierding, Nathan D. Dees, Dong Shen, Devin P. Locke, Madeline E. Wiechert, James M. Eldred, Josh B. Peck, Benjamin J. Oberkfell, Justin T. Lolofie, Feiyu Du, Amy Hawkins, Michelle D. O’Laughlin, Kelly E. Bernard, Mark Cunningham, Glendoria Elliott, Mark Mason, Dominic M. Thompson, Jennifer Ivanovich, Paul J. Goodfellow, Charles M. Perou, George M. Weinstock, Rebecca Aft, Mark A. Watson, Timothy J. Ley, Richard K. Wilson, Elaine R. Mardis - Nature 2010 被引用: 1,172
- Using VarScan 2 for Germline Variant Calling and Somatic Mutation Detection
著者: Daniel C. Koboldt, David E. Larson, Richard K. Wilson - Current Protocols in Bioinformatics 2013 被引用: 225
- Detection of brain somatic variation in epilepsy‐associated developmental lesions
著者: Tracy A. Bedrosian, Katherine E. Miller, Olivia Grischow, Kathleen M. Schieffer, Stephanie LaHaye, Hyojung Yoon, Anthony R. Miller, Jason B. Navarro, Jesse J. Westfall, Kristen Leraas, Samantha Choi, Rachel Williamson, James Fitch, Benjamin Kelly, Peter White, Kristy Lee, Sean McGrath, Catherine E. Cottrell, Vincent Magrini, Jeffrey R. Leonard, Jonathan Pindrik, Ammar Shaikhouni, Daniel R. Boué, Diana Thomas, Christopher R. Pierson, Richard K. Wilson, Adam P. Ostendorf, Elaine R. Mardis, Daniel C. Koboldt - Epilepsia 2022 被引用: 53
- Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication
著者: Michael J. Montague, Gang Li, Barbara Gandolfi, Razib Khan, Bronwen Aken, S. Searle, Patrick Minx, LaDeana Hillier, Daniel C. Koboldt, Brian W. Davis, Carlos A. Driscoll, Christina S. Barr, Kevin Blackistone, Javier Quilez, Belén Lorente-Galdós, Tomàs Marquès‐Bonet, Can Alkan, Gregg W.C. Thomas, Matthew W. Hahn, Marilyn Menotti‐Raymond, Stephen J. O’Brien, Richard K. Wilson, Leslie A. Lyons, William J. Murphy, Wesley C. Warren - National Academy of Sciences, Proceedings of the National Academy of Sciences 2014 被引用: 360
- Clonal Architecture of Secondary Acute Myeloid Leukemia
著者: Matthew J. Walter, Dong Shen, Li Ding, Jin Shao, Daniel C. Koboldt, Ken Chen, David E. Larson, Michael D. McLellan, David J. Dooling, Rachel M. Abbott, Robert S. Fulton, Vincent Magrini, Heather K. Schmidt, Joelle Kalicki-Veizer, Michelle D. O’Laughlin, Xian Fan, Marcus Grillot, Sarah Witowski, Sharon E. Heath, John L. Frater, William Eades, Michael H. Tomasson, Peter Westervelt, John F. DiPersio, Daniel C. Link, Elaine R. Mardis, Timothy J. Ley, Richard K. Wilson, Timothy A. Graubert - New England Journal of Medicine 2012 被引用: 771
- Exome sequencing of Finnish isolates enhances rare-variant association power
著者: Adam E. Locke, Karyn Meltz Steinberg, Charleston W. K. Chiang, Susan K. Service, Aki S. Havulinna, Laurel Stell, Matti Pirinen, Haley Abel, Colby Chiang, Robert S. Fulton, Anne Jackson, Chul Joo Kang, Krishna Kanchi, Daniel C. Koboldt, David E. Larson, Joanne O. Nelson, Thomas J. Nicholas, Arto Pietilä, Vasily Ramensky, Debashree Ray, Laura J. Scott, Heather M. Stringham, Jagadish Vangipurapu, Ryan Welch, Pranav Yajnik, Xianyong Yin, Johan G. Eriksson, Mika Ala‐Korpela, Marjo‐Riitta Järvelin, Minna Männikkö, Hannele Laivuori, FinnGen Project, Susan K. Dutcher, Nathan O. Stitziel, Richard K. Wilson, Ira M. Hall, Chiara Sabatti, Aarno Palotie, Veikko Salomaa, Markku Laakso, Samuli Ripatti, Michael Boehnke, Nelson B. Freimer - Nature 2019 被引用: 217
