Edward M. Rubin
1970–2022 年に発表
- 126
- 論文数
- 52,450
- 被引用数
- 102
- h 指数
- 126
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology47.1%
- Medicine19.2%
- Environmental Science11.4%
- Agricultural and Biological Sciences8.4%
- Engineering3.7%
- Neuroscience3.6%
- その他6.6%
トピック
- Genomics and Phylogenetic Studies8.3%
- Microbial Community Ecology and Physiology4.4%
- Gut microbiota and health2.8%
- Genomics and Chromatin Dynamics2.6%
- Bacteriophages and microbial interactions2.1%
- RNA and protein synthesis mechanisms1.8%
- その他78%
共著者
- L Pennacchio25
- Veena Afzal20
- Axel Visel16
- Ingrid Plajzer-Frick11
- Jan‐Fang Cheng10
- Jennifer A. Akiyama10
- Yiwen Zhu9
- Amy Holt8
- Desmond Smith8
- Malak Shoukry8
- Inna Dubchak7
- Olivier Couronne7
- Tanja Woyke7
- Kelly A. Frazer6
- Lior Pachter6
- Natalia Ivanova6
- Nikos C. Kyrpides6
- Shyam Prabhakar6
- Susannah G. Tringe6
- Amethyst Gillis5
- Corina Monagin5
- David J. McIver5
- Jean‐Charles Fruchart5
- John C. Detter5
全論文
- VISTA: computational tools for comparative genomics
著者: Kelly A. Frazer, Lior Pachter, Alexander Poliakov, Edward M. Rubin, Inna Dubchak - Nucleic Acids Research, Nucleic Acids Res. 2004 被引用: 2,966
- Insights into the phylogeny and coding potential of microbial dark matter
著者: Christian Rinke, Patrick Schwientek, Alexander Sczyrba, Natalia Ivanova, Iain Anderson, Jan‐Fang Cheng, Aaron E. Darling, Stephanie Malfatti, Brandon K. Swan, Esther Gies, Jeremy A. Dodsworth, Brian P. Hedlund, George Tsiamis, Stefan M. Sievert, Wen‐Tso Liu, Jonathan A. Eisen, Steven Hallam, Nikos C. Kyrpides, Ramūnas Stepanauskas, Edward M. Rubin, Philip Hugenholtz, Tanja Woyke - Nature 2013 被引用: 2,469
- Uncovering Earth’s virome
著者: David Páez-Espino, Emiley A. Eloe‐Fadrosh, Georgios A. Pavlopoulos, Alex D. Thomas, Marcel Huntemann, Natalia Mikhailova, Edward M. Rubin, Natalia Ivanova, Nikos C. Kyrpides - Nature 2016 被引用: 1,291
- Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
著者: Alexander Sczyrba, Peter Hofmann, Peter Belmann, David Koslicki, Stefan Janssen, Johannes Dröge, Ivan Gregor, Stephan Majda, Jessika Fiedler, Eik Dahms, Andreas Bremges, Adrian Fritz, Rubén Garrido‐Oter, Tue Sparholt Jørgensen, Nicole Shapiro, Philip D. Blood, Alexey Gurevich, Yang Bai, Dmitrij Turaev, Matthew Z. DeMaere, Rayan Chikhi, Niranjan Nagarajan, Christopher Quince, Fernando Meyer, Monika Balvočiūtė, Lars Hestbjerg Hansen, Søren J. Sørensen, Burton Kuan Hui Chia, Bertrand Denis, Jeff Froula, Zhong Wang, Robert W. Egan, Dongwan Kang, Jeffrey Cook, Charles Deltel, Michael Beckstette, Claire Lemaitre, Pierre Peterlongo, Guillaume Rizk, Dominique Lavenier, Yu‐Wei Wu, Steven W. Singer, Chirag Jain, Marc Strous, Heiner Klingenberg, Peter Meinicke, Michael D. Barton, Thomas Lingner, Hsin-Hung Lin, Yu-Chieh Liao, Genivaldo Gueiros Z. Silva, Daniel Cuevas, Robert A. Edwards, Surya Saha, Vitor C. Piro, Bernhard Y. Renard, Mihai Pop, Hans‐Peter Klenk, Markus Göker, Nikos C. Kyrpides, Tanja Woyke, Julia A. Vorholt, Paul Schulze‐Lefert, Edward M. Rubin, Aaron E. Darling, Thomas Rattei, Alice C. McHardy - Nature Methods 2017 被引用: 948
- Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
著者: Hungate1000 project collaborators, R. Seshadri, Sinead C. Leahy, Graeme T. Attwood, Koon Hoong Teh, Suzanne C. Lambie, Adrian L. Cookson, Emiley A. Eloe‐Fadrosh, Georgios A. Pavlopoulos, Michalis Hadjithomas, Neha Varghese, David Páez-Espino, Rechelle Perry, Gemma Henderson, Christopher J. Creevey, Nicolas Terrapon, Pascal Lapébie, Élodie Drula, Vincent Lombard, Edward M. Rubin, Nikos C. Kyrpides, Bernard Henrissat, Tanja Woyke, Natalia Ivanova, William J. Kelly - Nature Biotechnology 2018 被引用: 677
- Rhizosphere microbiome structure alters to enable wilt resistance in tomato
著者: Min-Jung Kwak, Hyun Gi Kong, Kihyuck Choi, Soon-Kyeong Kwon, Ju Yeon Song, Jidam Lee, Pyeong An Lee, Soo Yeon Choi, Minseok Seo, Hyoung Ju Lee, Eun Joo Jung, Hyein Park, Nazish Roy, Heebal Kim, Myeong Min Lee, Edward M. Rubin, Seon‐Woo Lee, Jihyun F. Kim - Nature Biotechnology 2018 被引用: 886
- Community structure and metabolism through reconstruction of microbial genomes from the environment
著者: Gene W. Tyson, Jarrod Chapman, Philip Hugenholtz, Eric E. Allen, Rachna J. Ram, Paul M. Richardson, Victor Solovyev, Edward M. Rubin, Daniel S. Rokhsar, Jillian F. Banfield - Nature 2004 被引用: 2,450
- Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
著者: Matthias Hess, Alexander Sczyrba, Rob Egan, Tae‐Wan Kim, Harshal A. Chokhawala, Gary P. Schroth, Shujun Luo, Douglas S. Clark, Feng Chen, Tao Zhang, Roderick I. Mackie, L Pennacchio, Susannah G. Tringe, Axel Visel, Tanja Woyke, Zhong Wang, Edward M. Rubin - Science 2011 被引用: 1,364
- In vivo enhancer analysis of human conserved non-coding sequences
著者: L Pennacchio, Nadav Ahituv, Alan M Moses, Shyam Prabhakar, Marcelo A. Nóbrega, Malak Shoukry, Simon Minovitsky, Inna Dubchak, Amy Holt, Keith D. Lewis, Ingrid Plajzer-Frick, Jennifer A. Akiyama, Sarah De Val, Veena Afzal, Brian L. Black, Olivier Couronne, Michael B. Eisen, Axel Visel, Edward M. Rubin - Nature 2006 被引用: 1,207
- CRAGE enables rapid activation of biosynthetic gene clusters in undomesticated bacteria
著者: Gaoyan Wang, Zhiying Zhao, Ke Jing, Yvonne Engel, Yi‐Ming Shi, David S. Robinson, Kerem Bingol, Zheyun Zhang, Benjamin P. Bowen, Katherine Louie, Bing Wang, Robert S. Evans, Y. Miyamoto, Kelly Cheng, Suzanne M. Kosina, Markus de Raad, Leslie Silva, Alicia Luhrs, Andrea Lubbe, David Hoyt, Charles Francavilla, Hiroshi Otani, Samuel Deutsch, Nancy Washton, Edward M. Rubin, Nigel J. Mouncey, Axel Visel, Trent R. Northen, Jan‐Fang Cheng, Helge B. Bode, Yasuo Yoshikuni - Nature Microbiology 2019 被引用: 154
- Progressive Loss of Function in a Limb Enhancer during Snake Evolution
著者: Evgeny Z. Kvon, Olga K. Kamneva, Uirá Souto Melo, Iros Barozzi, Marco Osterwalder, Brandon J. Mannion, Virginie Tissières, Catherine S. Pickle, Ingrid Plajzer-Frick, Elizabeth A. Lee, Momoe Kato, Tyler H. Garvin, Jennifer A. Akiyama, Veena Afzal, Javier López-Rı́os, Edward M. Rubin, Diane E. Dickel, L Pennacchio, Axel Visel - Cell 2016 被引用: 389
- Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
著者: Janine Kamke, Sandra Kittelmann, Priya Soni, Yang Li, M.H. Tavendale, Siva Ganesh, Peter H. Janssen, Weibing Shi, Jeff Froula, Edward M. Rubin, Graeme T. Attwood - Microbiome 2016 被引用: 363
- The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses
著者: Tracey Goldstein, Simon J. Anthony, Aiah A Gbakima, Brian H. Bird, James Bangura, Alexandre Tremeau‐Bravard, Manjunatha N. Belaganahalli, Heather Wells, Jasjeet Dhanota, Eliza Liang, Michael Grodus, Rohit K. Jangra, Veronica A. DeJesus, Gorka Lasso, Brett R. Smith, Amara Jambai, Brima Osaio Kamara, Sorie Mohamed Kamara, William Bangura, Corina Monagin, Sagi Shapira, Christine K. Johnson, Karen Saylors, Edward M. Rubin, Kartik Chandran, W. Ian Lipkin, Jonna A. K. Mazet - Nature Microbiology 2018 被引用: 388
- Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
著者: Patrick M. Shih, Dongying Wu, Amel Latifi, Seth D. Axen, David P. Fewer, Emmanuel Talla, Alexandra Calteau, Fei Cai, Nicole Tandeau de Marsac, Rosmarie Rippka, Michael Herdman, Kaarina Sivonen, Thérèse Coursin, Thierry Laurent, Lynne Goodwin, Matt Nolan, Karen W. Davenport, Cliff Han, Edward M. Rubin, Jonathan A. Eisen, Tanja Woyke, Muriel Gugger, Cheryl A. Kerfeld - National Academy of Sciences, Proceedings of the National Academy of Sciences 2012 被引用: 821
- The Epigenomic Landscape of Prokaryotes
著者: Matthew J. Blow, Tyson A. Clark, Chris Daum, Adam M. Deutschbauer, Alexey Fomenkov, Roxanne Fries, Jeff Froula, Dongwan Kang, Rex R. Malmstrom, Richard Morgan, János Pósfai, Kanwar Singh, Axel Visel, Kelly M. Wetmore, Zhiying Zhao, Edward M. Rubin, Jonas Korlach, L Pennacchio, Richard J. Roberts - PLoS Genetics 2016 被引用: 381
- Severe hypercholesterolemia and atherosclerosis in apolipoprotein E-deficient mice created by homologous recombination in ES cells
著者: Andrew Plump, Jonathan D. Smith, Tony Hayek, Katriina Aalto‐Setälä, A Walsh, Judy G. Verstuyft, Edward M. Rubin, Jan L. Breslow - Cell 1992 被引用: 2,262
- Accelerated Evolution of Conserved Noncoding Sequences in Humans
著者: Shyam Prabhakar, James P. Noonan, Svante Pääbo, Edward M. Rubin - Science 2006 被引用: 507
- VISTA : visualizing global DNA sequence alignments of arbitrary length
著者: Chris Mayor, Michael Brudno, Jody R. Schwartz, Alexander Poliakov, Edward M. Rubin, Kelly A. Frazer, Lior Pachter, Inna Dubchak - Bioinformatics, Bioinform. 2000 被引用: 1,066
- Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
著者: Weibing Shi, Christina D. Moon, Sinead C. Leahy, Dongwan Kang, Jeff Froula, Sandra Kittelmann, Christina Fan, Samuel Deutsch, Dragana Gagić, Henning Seedorf, William J. Kelly, Renee Atua, Carrie Sang, Priya Soni, Li Dong, C.S. Pinares-Patiño, John C. McEwan, Peter H. Janssen, Feng Chen, Axel Visel, Zhong Wang, Graeme T. Attwood, Edward M. Rubin - Genome Research 2014 被引用: 443
- Tracking the in vivo evolution of multidrug resistance in Staphylococcus aureus by whole-genome sequencing
著者: Michael Mwangi, Shang Wei Wu, Yanjiao Zhou, Krzysztof Sieradzki, Hermı́nia de Lencastre, Paul Richardson, David Bruce, Edward M. Rubin, Eugene W. Myers, Eric D. Siggia, Alexander Tomasz - National Academy of Sciences, Proceedings of the National Academy of Sciences 2007 被引用: 548
- Human-Specific Gain of Function in a Developmental Enhancer
著者: Shyam Prabhakar, Axel Visel, Jennifer A. Akiyama, Malak Shoukry, Keith D. Lewis, Amy Holt, Ingrid Plajzer-Frick, Harris Morrison, David Fitzpatrick, Veena Afzal, L Pennacchio, Edward M. Rubin, James P. Noonan - Science 2008 被引用: 390
- Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)
著者: Diego Martinez, Randy M. Berka, Bernard Henrissat, Markku Saloheimo, Mikko Arvas, Scott Baker, Jarod Chapman, Olga Chertkov, Pedro M. Coutinho, Dan Cullen, Étienne Danchin, Igor V. Grigoriev, Paul V. Harris, Melissa F. Jackson, Christian P. Kubicek, Cliff Han, Isaac Ho, Luis Larrondo, Alfredo Lopez de Leon, Jon Magnuson, Sandy Merino, Monica Misra, Beth A. Nelson, Nicholas H. Putnam, Barbara Robbertse, Asaf Salamov, Monika Schmoll, Astrid Terry, Nina Thayer, Ann Westerholm‐Parvinen, Conrad L. Schoch, Jian Yao, Ravi D. Barabote, Mary Anne Nelson, Chris Detter, David Bruce, Cheryl R. Kuske, Gary Xie, Paul Richardson, Daniel S. Rokhsar, Susan Lucas, Edward M. Rubin, Nigel Dunn-Coleman, Michael P. Ward, Thomas Brettin - Nature Biotechnology 2008 被引用: 1,276
- Stop codon reassignments in the wild
著者: Natalia Ivanova, Patrick Schwientek, H. James Tripp, Christian Rinke, Amrita Pati, Marcel Huntemann, Axel Visel, Tanja Woyke, Nikos C. Kyrpides, Edward M. Rubin - Science 2014 被引用: 163
- Transgenic Knockout Mice with Exclusively Human Sickle Hemoglobin and Sickle Cell Disease
著者: Chris Pászty, Catherine M. Brion, Elizabeth A. Manci, H. Ewa Witkowska, Mary E. Stevens, Narla Mohandas, Edward M. Rubin - Science 1997 被引用: 469
