Emily Vogtmann
2012–2025 年に発表
- 55
- 論文数
- 32,130
- 被引用数
- 34
- h 指数
- 52
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology46.4%
- Medicine17.1%
- Environmental Science12.8%
- Agricultural and Biological Sciences10.9%
- Immunology and Microbiology4%
- Dentistry2.8%
- その他6%
トピック
- Gut microbiota and health19.9%
- Microbial Community Ecology and Physiology4.1%
- Clostridium difficile and Clostridium perfringens research3.4%
- Probiotics and Fermented Foods2.9%
- Diet and metabolism studies2.8%
- Genomics and Phylogenetic Studies2.4%
- その他64.5%
共著者
- Rashmi Sinha25
- Christian C. Abnet22
- Jianxin Shi20
- Rob Knight14
- Yunhu Wan14
- Xing Hua13
- Nicholas A. Bokulich9
- Amy Hutchinson8
- Belynda Hicks8
- Casey Dagnall8
- J. Gregory Caporaso8
- Kristine Jones8
- Zeni Wu8
- Autumn G. Hullings7
- Doratha A. Byrd7
- Erikka Loftfield7
- Nicholas Chia7
- Yukiko Yano7
- Jun Chen6
- Neal D. Freedman6
- Amnon Amir5
- Qi‐Jun Wu5
- Shilan Li5
- Vaishnavi Purandare5
全論文
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters ほか 12 名 - Nature Biotechnology 2019 被引用: 24,006
- Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
著者: Jakob Wirbel, Paul Theodor Pyl, Ece Kartal, Konrad Zych, Alireza Kashani, Alessio Milanese, Jonas Simon Fleck, Anita Y. Voigt, Albert Pallejá, Ruby Ponnudurai, Shinichi Sunagawa, Luís Pedro Coelho, Petra Schrotz‐King, Emily Vogtmann, Nina Habermann, Emma Niméus, Andrew Maltez Thomas, Paolo Manghi, Sara Gandini, Davide Serrano, Sayaka Mizutani, Hirotsugu Shiroma, Satoshi Shiba, Tatsuhiro Shibata, Shinichi Yachida, Takuji Yamada, Levi Waldron, Alessio Naccarati, Nicola Segata, Rashmi Sinha, Cornelia M. Ulrich, Hermann Brenner, Manimozhiyan Arumugam, Peer Bork, Georg Zeller - Nature Medicine 2019 被引用: 1,387
- Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters ほか 12 名 - Nature Biotechnology 2019 被引用: 874
- Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium
著者: Rashmi Sinha, Galeb Abu-Ali, Emily Vogtmann, Anthony A. Fodor, Boyu Ren, Amnon Amir, Emma Schwager, Jonathan Crabtree, Siyuan Ma, Christian C. Abnet, Rob Knight, Owen White, Curtis Huttenhower - Nature Biotechnology 2017 被引用: 570
- Colorectal Cancer and the Human Gut Microbiome: Reproducibility with Whole-Genome Shotgun Sequencing
著者: Emily Vogtmann, Xing Hua, Georg Zeller, Shinichi Sunagawa, Anita Y. Voigt, Rajna Hercog, James J. Goedert, Jianxin Shi, Peer Bork, Rashmi Sinha - PLoS ONE 2016 被引用: 395
- Fecal Metabolomic Signatures in Colorectal Adenoma Patients Are Associated with Gut Microbiota and Early Events of Colorectal Cancer Pathogenesis
著者: Minsuk Kim, Emily Vogtmann, David A. Ahlquist, Mary E. Devens, John B. Kisiel, William R. Taylor, Bryan A. White, Vanessa L. Hale, Jaeyun Sung, Nicholas Chia, Rashmi Sinha, Jun Chen - mBio 2020 被引用: 172
- Microbial characterization of esophageal squamous cell carcinoma and gastric cardia adenocarcinoma from a high‐risk region of China
著者: Dantong Shao, Emily Vogtmann, Anqi Liu, Junjie Qin, Wen Chen, Christian C. Abnet, Wenqiang Wei - Cancer 2019 被引用: 161
- Associations of fecal microbial profiles with breast cancer and nonmalignant breast disease in the Ghana Breast Health Study
著者: Doratha A. Byrd, Emily Vogtmann, Zeni Wu, Yongli Han, Yunhu Wan, Joe‐Nat Clegg‐Lamptey, Joel Yarney, Beatrice Wiafe‐Addai, Seth Wiafe, Baffour Awuah, Daniel Ansong, Kofi Nyarko, Autumn G. Hullings, Xing Hua, Thomas U. Ahearn, James J. Goedert, Jianxin Shi, Rob Knight, Jonine D. Figueroa, Louise A. Brinton, Montserrat García‐Closas, Rashmi Sinha - International Journal of Cancer 2021 被引用: 83
- DNA extraction for human microbiome studies: the issue of standardization
著者: K. Leigh Greathouse, Rashmi Sinha, Emily Vogtmann - Genome biology 2019 被引用: 134
- The Oral Microbiome and Lung Cancer Risk: An Analysis of 3 Prospective Cohort Studies
著者: Emily Vogtmann, Xing Hua, Guoqin Yu, Vaishnavi Purandare, Autumn G. Hullings, Dantong Shao, Yunhu Wan, Shilan Li, Casey Dagnall, Kristine Jones, Belynda Hicks, Amy Hutchinson, J. Gregory Caporaso, William Wheeler, Dale P. Sandler, Laura E. Beane Freeman, Linda M. Liao, Wen‐Yi Huang, Neal D. Freedman, Neil E. Caporaso, Rashmi Sinha, Mitchell H. Gail, Jianxin Shi, Christian C. Abnet - JNCI Journal of the National Cancer Institute 2022 被引用: 83
- QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang ほか 9 名 - 2018 被引用: 883
- Oral microbial community composition is associated with pancreatic cancer: A case‐control study in Iran
著者: Emily Vogtmann, Yongli Han, J. Gregory Caporaso, Nicholas A. Bokulich, Ashraf Mohamadkhani, Alireza Moayyedkazemi, Xing Hua, Farin Kamangar, Yunhu Wan, Shalabh Suman, Bin Zhu, Amy Hutchinson, Casey Dagnall, Kristine Jones, Belynda Hicks, Jianxin Shi, Reza Malekzadeh, Christian C. Abnet, Akram Pourshams - Cancer Medicine 2019 被引用: 72
- Comparison of Collection Methods for Fecal Samples in Microbiome Studies
著者: Emily Vogtmann, Jun Chen, Amnon Amir, Jianxin Shi, Christian C. Abnet, Heidi Nelson, Rob Knight, Nicholas Chia, Rashmi Sinha - American Journal of Epidemiology 2016 被引用: 162
- Epidemiologic studies of the human microbiome and cancer
著者: Emily Vogtmann, James J. Goedert - British Journal of Cancer 2016 被引用: 210
- Markers of metabolic health and gut microbiome diversity: findings from two population-based cohort studies
著者: Sémi Zouiouich, Erikka Loftfield, Inge Huybrechts, Vivian Viallon, Panayiotis Louca, Emily Vogtmann, Philippa M. Wells, Claire J. Steves, Karl‐Heinz Herzig, Cristina Menni, Marjo‐Riitta Järvelin, Rashmi Sinha, Marc J. Gunter - Diabetologia 2021 被引用: 62
- Representative oral microbiome data for the US population: the National Health and Nutrition Examination Survey
著者: Emily Vogtmann, Anil K. Chaturvedi, Martin J. Blaser, Nicholas A. Bokulich, J. Gregory Caporaso, Maura L. Gillison, Xing Hua, Autumn G. Hullings, Rob Knight, Vaishnavi Purandare, Jianxin Shi, Yunhu Wan, Neal D. Freedman, Christian C. Abnet - The Lancet Microbe 2022 被引用: 34
- QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang ほか 10 名 - 2018 被引用: 584
- fast.adonis: a computationally efficient non-parametric multivariate analysis of microbiome data for large-scale studies
著者: Shilan Li, Emily Vogtmann, Barry I. Graubard, Mitchell H. Gail, Christian C. Abnet, Jianxin Shi - Bioinformatics Advances 2022 被引用: 23
- The oral microbiome and breast cancer and nonmalignant breast disease, and its relationship with the fecal microbiome in the Ghana Breast Health Study
著者: Zeni Wu, Doratha A. Byrd, Yunhu Wan, Daniel Ansong, Joe‐Nat Clegg‐Lamptey, Beatrice Wiafe‐Addai, Lawrence Edusei, Ernest Adjei, Nicholas Titiloye, Florence Dedey, Francis Aitpillah, Joseph K. Oppong, Verna Vanderpuye, Ernest Osei‐Bonsu, Casey Dagnall, Kristine Jones, Amy Hutchinson, Belynda Hicks, Thomas U. Ahearn, Jianxin Shi, Rob Knight, Richard Biritwum, Joel Yarney, Seth Wiafe, Baffour Awuah, Kofi Nyarko, Jonine D. Figueroa, Rashmi Sinha, Montserrat García‐Closas, Louise A. Brinton, Emily Vogtmann - International Journal of Cancer 2022 被引用: 33
- Oral microbiome and risk of incident head and neck cancer: A nested case-control study
著者: Zeni Wu, Yongli Han, Yunhu Wan, Xing Hua, Samantha S Chill, Kedest Teshome, Weiyin Zhou, Jia Liu, Dongjing Wu, Amy Hutchinson, Kristine Jones, Casey Dagnall, Belynda Hicks, Linda M. Liao, Heather E. Hallen‐Adams, Jianxin Shi, Christian C. Abnet, Rashmi Sinha, Anil K. Chaturvedi, Emily Vogtmann - Oral Oncology 2023 被引用: 20
- The Human Microbiome in Relation to Cancer Risk: A Systematic Review of Epidemiologic Studies
著者: Inge Huybrechts, Sémi Zouiouich, Astrid Loobuyck, Zeger Vandenbulcke, Emily Vogtmann, Silvia Pisanu, Isabel Iguacel, Augustin Scalbert, Iciar Indave, Vitaly Smelov, Marc J. Gunter, Nathalie Michels - Cancer Epidemiology Biomarkers & Prevention 2020 被引用: 75
- Associations of Circulating Estrogens and Estrogen Metabolites with Fecal and Oral Microbiome in Postmenopausal Women in the Ghana Breast Health Study
著者: Zeni Wu, Ruth M. Pfeiffer, Doratha A. Byrd, Yunhu Wan, Daniel Ansong, Joe‐Nat Clegg‐Lamptey, Beatrice Wiafe‐Addai, Lawrence Edusei, Ernest Adjei, Nicholas Titiloye, Florence Dedey, Francis Aitpillah, Joseph K. Oppong, Verna Vanderpuye, Ernest Osei‐Bonsu, Casey Dagnall, Kristine Jones, Amy Hutchinson, Belynda Hicks, Thomas U. Ahearn, Rob Knight, Richard Biritwum, Joel Yarney, Seth Wiafe, Baffour Awuah, Kofi Nyarko, Montserrat García‐Closas, Rashmi Sinha, Jonine D. Figueroa, Louise A. Brinton, Britton Trabert, Emily Vogtmann - Microbiology Spectrum 2023 被引用: 25
- Cruciferous vegetables intake and the risk of colorectal cancer: a meta-analysis of observational studies
著者: Qi‐Jun Wu, Ya Yang, Emily Vogtmann, J. Wang, Lihua Han, H.L. Li, Yong‐Bing Xiang - Annals of Oncology 2012 被引用: 215
- Collecting Fecal Samples for Microbiome Analyses in Epidemiology Studies
著者: Rashmi Sinha, Jun Chen, Amnon Amir, Emily Vogtmann, Jianxin Shi, Kristin S. Inman, Roberto Flores, Joshua N. Sampson, Rob Knight, Nicholas Chia - Cancer Epidemiology Biomarkers & Prevention 2015 被引用: 209
