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Fernando Vargas

2000–2024 年に発表

40
論文数
31,593
被引用数
29
h 指数
38
i10 指数

被引用数

Fernando Vargas の年別被引用数1976 年: 被引用 1 件1990 年: 被引用 1 件1992 年: 被引用 1 件1996 年: 被引用 1 件2001 年: 被引用 2 件2002 年: 被引用 1 件2004 年: 被引用 1 件2005 年: 被引用 1 件2006 年: 被引用 3 件2007 年: 被引用 1 件2008 年: 被引用 1 件2010 年: 被引用 1 件2011 年: 被引用 2 件2012 年: 被引用 1 件2013 年: 被引用 2 件2017 年: 被引用 1 件2018 年: 被引用 10 件2019 年: 被引用 230 件2020 年: 被引用 1,008 件2021 年: 被引用 1,561 件2022 年: 被引用 1,505 件2023 年: 被引用 1,196 件2024 年: 被引用 2,052 件2025 年: 被引用 877 件2026 年: 被引用 18 件1977〜1989 年は被引用が無いため表示していません1991 年は被引用が無いため表示していません1993〜1995 年は被引用が無いため表示していません1997〜2000 年は被引用が無いため表示していません2003 年は被引用が無いため表示していません2009 年は被引用が無いため表示していません2014〜2016 年は被引用が無いため表示していません

引用元

国・地域

この著者を引用した国・地域の世界地図アメリカ合衆国: 引用元論文 2,675 件、この内訳の 21.2%中国: 引用元論文 2,222 件、この内訳の 17.6%ドイツ: 引用元論文 584 件、この内訳の 4.6%イギリス: 引用元論文 489 件、この内訳の 3.9%カナダ: 引用元論文 483 件、この内訳の 3.8%イタリア: 引用元論文 448 件、この内訳の 3.5%日本: 引用元論文 384 件、この内訳の 3%オーストラリア: 引用元論文 383 件、この内訳の 3%スペイン: 引用元論文 377 件、この内訳の 3%フランス: 引用元論文 329 件、この内訳の 2.6%オランダ: 引用元論文 313 件、この内訳の 2.5%韓国: 引用元論文 302 件、この内訳の 2.4%
0%21.2%その他 28.9%

機関

分野

  • Biochemistry, Genetics and Molecular Biology44.2%
  • Medicine16.7%
  • Environmental Science13.8%
  • Agricultural and Biological Sciences12.3%
  • Immunology and Microbiology4.1%
  • Dentistry2.1%
  • その他6.8%

トピック

  • Gut microbiota and health18.3%
  • Microbial Community Ecology and Physiology4.3%
  • Clostridium difficile and Clostridium perfringens research3.1%
  • Probiotics and Fermented Foods2.8%
  • Diet and metabolism studies2.7%
  • Metabolomics and Mass Spectrometry Studies2.6%
  • その他66.2%

共著者

全論文

検索で開く
  1. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

    著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters ほか 12 名 - Nature Biotechnology 2019 被引用: 24,006

  2. Global chemical effects of the microbiome include new bile-acid conjugations

    著者: Robert A. Quinn, Alexey V. Melnik, Alison Vrbanac, Ting Fu, Kathryn A. Patras, Mitchell P. Christy, Zsolt Bodai, Pedro Belda‐Ferre, Anupriya Tripathi, Lawton K. Chung, Michael Downes, Ryan D. Welch, Melissa A. Quinn, Greg Humphrey, Morgan Panitchpakdi, Kelly C. Weldon, Alexander A. Aksenov, Ricardo Silva, Julián Ávila-Pacheco, Clary B. Clish, Sena Bae, Himel Mallick, Eric A. Franzosa, Jason Lloyd‐Price, Robert H. Bussell, Taren Thron, Andrew T. Nelson, Mingxun Wang, Eric C. Leszczynski, Fernando Vargas, Julia M. Gauglitz, Michael J. Meehan, Emily C. Gentry, Timothy D. Arthur, Alexis C. Komor, Orit Poulsen, Brigid S. Boland, John T. Chang, William J. Sandborn, Meerana Lim, Neha Garg, Julie C. Lumeng, Ramnik J. Xavier, Barbara I. Kazmierczak, Ruchi Jain, Marie E. Egan, Kyung E. Rhee, David P. Ferguson, Manuela Raffatellu, Hera Vlamakis, Gabriel G. Haddad, Dionicio Siegel, Curtis Huttenhower, Sarkis K. Mazmanian, Ronald M. Evans, Victor Nizet, Rob Knight, Pieter C. Dorrestein - Nature 2020 被引用: 600

  3. Reproducible molecular networking of untargeted mass spectrometry data using GNPS

    著者: Allegra T. Aron, Emily C. Gentry, Kerry L. McPhail, Louis‐Félix Nothias, Mélissa Nothias-Esposito, Amina Bouslimani, Daniel Petras, Julia M. Gauglitz, Nicole Sikora, Fernando Vargas, Justin J. J. van der Hooft, Madeleine Ernst, Kyo Bin Kang, Christine M. Aceves, Andrés Mauricio Caraballo‐Rodríguez, Irina Koester, Kelly C. Weldon, Samuel Bertrand, Catherine Roullier, Kunyang Sun, Richard M. Tehan, Cristopher A. Boya P., Christian Martin, Marcelino Gutiérrez, Aldo Moreno‐Ulloa, Javier Andres Tejeda Mora, Randy Mojica-Flores, Johant Lakey‐Beitia, Víctor Vásquez-Chaves, Yilue Zhang, Ángela I. Calderón, Nicole Tayler, Robert A. Keyzers, Fidele Tugizimana, Nombuso Ndlovu, Alexander A. Aksenov, Alan K. Jarmusch, Robin Schmid, Andrew W. Truman, Nuno Bandeira, Mingxun Wang, Pieter C. Dorrestein - Nature Protocols 2020 被引用: 703

  4. Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

    著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters ほか 12 名 - Nature Biotechnology 2019 被引用: 874

  5. Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment

    著者: Robin Schmid, Daniel Petras, Louis‐Félix Nothias, Mingxun Wang, Allegra T. Aron, Annika Jagels, Hiroshi Tsugawa, Johannes Rainer, Mar Garcia‐Aloy, Kai Dührkop, Ansgar Korf, Tomáš Pluskal, Zdeněk Kameník, Alan K. Jarmusch, Andrés Mauricio Caraballo‐Rodríguez, Kelly C. Weldon, Mélissa Nothias-Esposito, Alexander A. Aksenov, Anelize Bauermeister, Andrea G. Albarracín Orio, Carlismari O. Grundmann, Fernando Vargas, Irina Koester, Julia M. Gauglitz, Emily C. Gentry, Yannick Hövelmann, Svetlana A. Kalinina, Matthew A. Pendergraft, Morgan Panitchpakdi, Richard M. Tehan, Audrey Le Gouëllec, Gajender Aleti, Helena Mannochio-Russo, Birgit Arndt, Florian Hübner, Heiko Hayen, Hui Zhi, Manuela Raffatellu, Kimberly A. Prather, Lihini I. Aluwihare, Sebastian Böcker, Kerry L. McPhail, Hans‐Ulrich Humpf, Uwe Kärst, Pieter C. Dorrestein - Nature Communications 2021 被引用: 319

  6. Mass spectrometry searches using MASST

    著者: Mingxun Wang, Alan K. Jarmusch, Fernando Vargas, Alexander A. Aksenov, Julia M. Gauglitz, Kelly C. Weldon, Daniel Petras, Ricardo Silva, Robert A. Quinn, Alexey V. Melnik, Justin J. J. van der Hooft, Andrés Mauricio Caraballo‐Rodríguez, Louis‐Félix Nothias, Christine M. Aceves, Morgan Panitchpakdi, Elizabeth A. R. Brown, Francesca Di Ottavio, Nicole Sikora, Emmanuel O. Elijah, Lara Labarta-Bajo, Emily C. Gentry, Shabnam Shalapour, Kathleen E. Kyle, Sara P. Puckett, Jeramie D. Watrous, Carolina S. Carpenter, Amina Bouslimani, Madeleine Ernst, Austin D. Swafford, Elina I. Zúñiga, Marcy J. Balunas, Jonathan L. Klassen, Rohit Loomba, Rob Knight, Nuno Bandeira, Pieter C. Dorrestein - Nature Biotechnology 2020 被引用: 296

  7. Paired microbiome and metabolome analyses associate bile acid changes with colorectal cancer progression

    著者: Ting Fu, Tao Huan, Gibraan Rahman, Hui Zhi, Zhenjiang Zech Xu, Tae Gyu Oh, Jian Guo, Sally Coulter, Anupriya Tripathi, Cameron Martino, Justin L. McCarville, Qiyun Zhu, Fritz Cayabyab, Brian Low, Ming‐Xiao He, Shipei Xing, Fernando Vargas, Ruth T. Yu, Annette R. Atkins, Christopher Liddle, Janelle S. Ayres, Manuela Raffatellu, Pieter C. Dorrestein, Michael Downes, Rob Knight, Ronald M. Evans - Cell Reports 2023 被引用: 78

  8. Database-independent molecular formula annotation using Gibbs sampling through ZODIAC

    著者: Marcus Ludwig, Louis-Félix Nothias, Kai Dührkop, Irina Koester, Markus Fleischauer, Martin A. Hoffmann, Daniel Petras, Fernando Vargas, Mustafa Morsy, Lihini Aluwihare, Pieter C. Dorrestein, Sebastian Böcker - Nature Machine Intelligence, Nat. Mach. Intell. 2020 被引用: 222

  9. ReDU: a framework to find and reanalyze public mass spectrometry data

    著者: Alan K. Jarmusch, Mingxun Wang, Christine M. Aceves, Rohit S. Advani, Shaden Aguirre, Alexander A. Aksenov, Gajender Aleti, Allegra T. Aron, Anelize Bauermeister, Sanjana Bolleddu, Amina Bouslimani, Andrés Mauricio Caraballo‐Rodríguez, Rama Chaar, Roxana Coras, Emmanuel O. Elijah, Madeleine Ernst, Julia M. Gauglitz, Emily C. Gentry, Makhai Husband, Scott A. Jarmusch, Kenneth Lyons Jones, Zdeněk Kameník, Audrey Le Gouëllec, Aileen Lu, Laura‐Isobel McCall, Kerry L. McPhail, Michael J. Meehan, Alexey V. Melnik, Riya C. Menezes, Yessica Alejandra Montoya Giraldo, Ngoc Hung Nguyen, Louis‐Félix Nothias, Mélissa Nothias-Esposito, Morgan Panitchpakdi, Daniel Petras, Robert A. Quinn, Nicole Sikora, Justin J. J. van der Hooft, Fernando Vargas, Alison Vrbanac, Kelly C. Weldon, Rob Knight, Nuno Bandeira, Pieter C. Dorrestein - Nature Methods 2020 被引用: 137

  10. Enhancing untargeted metabolomics using metadata-based source annotation

    著者: Julia M. Gauglitz, Kiana West, Wout Bittremieux, Candace L. Williams, Kelly C. Weldon, Morgan Panitchpakdi, Francesca Di Ottavio, Christine M. Aceves, Elizabeth A. R. Brown, Nicole Sikora, Alan K. Jarmusch, Cameron Martino, Anupriya Tripathi, Michael J. Meehan, Kathleen Dorrestein, Justin P. Shaffer, Roxana Coras, Fernando Vargas, Lindsay DeRight Goldasich, Tara Schwartz, MacKenzie Bryant, Gregory Humphrey, Abigail J. Johnson, Katharina Spengler, Pedro Belda‐Ferre, Edgar Diaz, Daniel McDonald, Qiyun Zhu, Emmanuel O. Elijah, Mingxun Wang, Clarisse Marotz, Kate E. Sprecher, Daniela Vargas-Robles, Dana Withrow, Gail Ackermann, Lourdes Herrera, B.J. Bradford, Lucas Maciel Mauriz Marques, Juliano Geraldo Amaral, Rodrigo Moreira da Silva, Flávio P. Veras, Thiago M. Cunha, Renê Donizeti Ribeiro de Oliveira, Paulo Louzada‐Júnior, Robert H. Mills, Paulina K. Piotrowski, Stephanie L. Servetas, Sandra M. Da Silva, Christina M. Jones, Nancy J. Lin, Katrice A. Lippa, Scott A. Jackson, Rima Kaddurah Daouk, Douglas Galasko, Parambir S. Dulai, Tatyana Kalashnikova, Curt Wittenberg, Robert Terkeltaub, Megan M. Doty, Jae Kim, Kyung E. Rhee, Julia Beauchamp‐Walters, Kenneth P. Wright, Maria Gloria Domínguez-Bello, Mark Manary, Michelli F. Oliveira, Brigid S. Boland, Norberto Peporine Lopes, Mónica Gumá, Austin D. Swafford, Rachel J. Dutton, Rob Knight, Pieter C. Dorrestein - Nature Biotechnology 2022 被引用: 77

  11. QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

    著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang ほか 9 名 - 2018 被引用: 883

  12. Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures

    著者: Jacob M. Wozniak, Robert H. Mills, Joshua Olson, J.R. Caldera, Gregory D. Sepich‐Poore, Marvic Carrillo-Terrazas, Chih‐Ming Tsai, Fernando Vargas, Rob Knight, Pieter C. Dorrestein, George Y. Liu, Victor Nizet, George Sakoulas, Warren E. Rose, David J. Gonzalez - Cell 2020 被引用: 127

  13. Repeated sleep disruption in mice leads to persistent shifts in the fecal microbiome and metabolome

    著者: Samuel J. Bowers, Fernando Vargas, Antonio González, Shannon He, Peng Jiang, Pieter C. Dorrestein, Rob Knight, Kenneth P. Wright, Christopher A. Lowry, Monika Fleshner, Martha Hotz Vitaterna, Fred W. Turek - PLoS ONE 2020 被引用: 98

  14. Feature-based Molecular Networking in the GNPS Analysis Environment

    著者: Louis‐Félix Nothias, Daniel Petras, Robin Schmid, Kai Dührkop, Johannes Rainer, Abinesh Sarvepalli, Ivan Protsyuk, Madeleine Ernst, Hiroshi Tsugawa, Markus Fleischauer, Fabian Aicheler, Alexander A. Aksenov, Oliver Alka, Pierre‐Marie Allard, Aiko Barsch, Xavier Cachet, Andrés Mauricio Caraballo‐Rodríguez, Ricardo Silva, Tam Dang, Neha Garg, Julia M. Gauglitz, Alexey Gurevich, Giorgis Isaac, Alan K. Jarmusch, Zdeněk Kameník, Kyo Bin Kang, Nikolas Kessler, Irina Koester, Ansgar Korf, Audrey Le Gouëllec, Marcus Ludwig, Christian Martin, Laura‐Isobel McCall, Jonathan McSayles, Sven Meyer, Hosein Mohimani, Mustafa Morsy, Oriane Moyne, Steffen Neumann, Heiko Neuweger, Ngoc Hung Nguyen, Mélissa Nothias-Esposito, Julien Paolini, Vanessa V. Phelan, Tomáš Pluskal, Robert A. Quinn, Simon Rogers, Bindesh Shrestha, Anupriya Tripathi, Justin J. J. van der Hooft, Fernando Vargas, Kelly C. Weldon, Michael Witting, Heejung Yang, Zheng Zhang, Florian Zubeil, Oliver Kohlbacher, Sebastian Böcker, Theodore Alexandrov, Nuno Bandeira, Mingxun Wang, Pieter C. Dorrestein - Nature Methods 2019 被引用: 1,549

  15. MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities

    著者: Liu Cao, Alexey Gurevich, Kelsey L. Alexander, C. Benjamin Naman, Tiago Leão, Evgenia Glukhov, Tal Luzzatto‐Knaan, Fernando Vargas, Robby Quinn, Amina Bouslimani, Louis‐Félix Nothias, Nitin K. Singh, Jon G. Sanders, Rodolfo Antonio Salido Benítez, Luke Thompson, Md-Nafiz Hamid, James T. Morton, Alla Mikheenko, Alexander Shlemov, Anton Korobeynikov, Iddo Friedberg, Rob Knight, Kasthuri Venkateswaran, William H. Gerwick, Lena Gerwick, Pieter C. Dorrestein, Pavel A. Pevzner, Hosein Mohimani - Cell Systems 2019 被引用: 74

  16. Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

    著者: Alexey V. Melnik, Ricardo Silva, Embriette R. Hyde, Alexander A. Aksenov, Fernando Vargas, Amina Bouslimani, Ivan Protsyuk, Alan K. Jarmusch, Anupriya Tripathi, Theodore Alexandrov, Rob Knight, Pieter C. Dorrestein - Analytical Chemistry 2017 被引用: 93

  17. Ruminiclostridium 5, Parabacteroides distasonis, and bile acid profile are modulated by prebiotic diet and associate with facilitated sleep/clock realignment after chronic disruption of rhythms

    著者: Robert S. Thompson, Michelle Gaffney, Shelby Hopkins, Tel Kelley, Antonio González, Samuel J. Bowers, Martha Hotz Vitaterna, Fred W. Turek, Christine L. Foxx, Christopher A. Lowry, Fernando Vargas, Pieter C. Dorrestein, Kenneth P. Wright, Rob Knight, Monika Fleshner - Brain Behavior and Immunity 2021 被引用: 72

  18. QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

    著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang ほか 10 名 - 2018 被引用: 584

  19. A Prebiotic Diet Alters the Fecal Microbiome and Improves Sleep in Response to Sleep Disruption in Rats

    著者: Samuel J. Bowers, Keith C. Summa, Robert S. Thompson, Antonio González, Fernando Vargas, Christopher Olker, Peng Jiang, Christopher A. Lowry, Pieter C. Dorrestein, Rob Knight, Kenneth P. Wright, Monika Fleshner, Fred W. Turek, Martha Hotz Vitaterna - Frontiers in Neuroscience 2022 被引用: 24

  20. Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

    著者: Julia M. Gauglitz, Christine M. Aceves, Alexander A. Aksenov, Gajender Aleti, Jehad Almaliti, Amina Bouslimani, Elizabeth A. R. Brown, Anaamika Campeau, Andrés Mauricio Caraballo‐Rodríguez, Rama Chaar, Ricardo Silva, Alyssa M. Demko, Francesca Di Ottavio, Emmanuel O. Elijah, Madeleine Ernst, L. Paige Ferguson, Xavier Holmes, Alan K. Jarmusch, Lingjing Jiang, Kyo Bin Kang, Irina Koester, Brian Kwan, Jie Li, Yueying Li, Alexey V. Melnik, Carlos Molina‐Santiago, Bohan Ni, Aaron L. Oom, Morgan Panitchpakdi, Daniel Petras, Robert A. Quinn, Nicole Sikora, Katharina Spengler, Bahar Teke, Anupriya Tripathi, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Alison Vrbanac, Anthony Q. Vu, Steven C Wang, Kelly C. Weldon, Kayla Wilson, Jacob M. Wozniak, Michael C. Yoon, Nuno Bandeira, Pieter C. Dorrestein - Food Chemistry 2019 被引用: 81

  21. Dietary prebiotics alter novel microbial dependent fecal metabolites that improve sleep

    著者: Robert S. Thompson, Fernando Vargas, Pieter C. Dorrestein, Maciej Chichlowski, Brian Berg, Monika Fleshner - Scientific Reports 2020 被引用: 64

  22. Gastrointestinal Surgery for Inflammatory Bowel Disease Persistently Lowers Microbiome and Metabolome Diversity

    著者: Xin Fang, Yoshiki Vázquez‐Baeza, Emmanuel O. Elijah, Fernando Vargas, Gail Ackermann, Gregory Humphrey, Rebecca Lau, Kelly C. Weldon, Jon G. Sanders, Morgan Panitchpakdi, Carolina S. Carpenter, Alan K. Jarmusch, Jennifer Neill, Ara Miralles, Parambir S. Dulai, Siddharth Singh, Matthew Tsai, Austin D. Swafford, Larry Smarr, David L. Boyle, Bernhard Ø. Palsson, John T. Chang, Pieter C. Dorrestein, William J. Sandborn, Rob Knight, Brigid S. Boland - Inflammatory Bowel Diseases 2020 被引用: 47

  23. De Novo Peptide Sequencing Reveals Many Cyclopeptides in the Human Gut and Other Environments

    著者: Bahar Behsaz, Hosein Mohimani, Alexey Gurevich, Andrey D. Prjibelski, Mark Fisher, Fernando Vargas, Larry Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner - Cell Systems 2019 被引用: 45

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