Hiroki R. Ueda
1998–2025 年に発表
- 102
- 論文数
- 18,182
- 被引用数
- 72
- h 指数
- 98
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Neuroscience33.5%
- Biochemistry, Genetics and Molecular Biology32.9%
- Medicine16.8%
- Engineering4.5%
- Computer Science3.9%
- Agricultural and Biological Sciences2.2%
- その他6.2%
トピック
- Circadian rhythm and melatonin8.9%
- Light effects on plants2.8%
- Single-cell and spatial transcriptomics2.5%
- Advanced Fluorescence Microscopy Techniques2.5%
- Cell Image Analysis Techniques2.4%
- Epigenetics and DNA Methylation2%
- その他78.9%
共著者
- Etsuo A. Susaki20
- Koji L. Ode18
- Maki Ukai‐Tadenuma14
- Rikuhiro G. Yamada13
- Hideki Ukai11
- Shoi Shi11
- Hiroshi Fujishima10
- Katsuhiko Matsumoto10
- Kazuki Tainaka10
- Takeya Kasukawa9
- Hiroshi Kiyonari7
- Kei Takahashi7
- Masamitsu Iino7
- Yoshihiro Shimizu7
- Kenta Sumiyama6
- Kohei Miyazono6
- Shimpei I. Kubota6
- Yasufumi Shigeyoshi6
- Chika Shimizu5
- Daisuke Tone5
- Dimitri Perrin5
- Koh‐hei Masumoto5
- Mamoru Nagano5
- Seiichi Hashimoto5
全論文
- SMILES Transformer: Pre-trained Molecular Fingerprint for Low Data Drug Discovery
著者: Shion Honda, Shoi Shi, Hiroki R. Ueda - arXiv (Cornell University), CoRR 2019 被引用: 166
- Tissue clearing and its applications in neuroscience
著者: Hiroki R. Ueda, Ali Ertürk, Kwanghun Chung, Viviana Gradinaru, Alain Chédotal, Pavel Tomančák, Philipp Keller - Nature reviews. Neuroscience 2020 被引用: 632
- Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis
著者: Etsuo A. Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M. Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi, Takaya Abe, Hiroshi Kiyonari, Yoshihiro Shimizu, Atsushi Miyawaki, Hideo Yokota, Hiroki R. Ueda - Cell 2014 被引用: 1,405
- Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging
著者: Etsuo A. Susaki, Kazuki Tainaka, Dimitri Perrin, Hiroko Yukinaga, Akihiro Kuno, Hiroki R. Ueda - Nature Protocols 2015 被引用: 863
- Generation of a p16 Reporter Mouse and Its Use to Characterize and Target p16high Cells In Vivo
著者: Satotaka Omori, Teh-Wei Wang, Yoshikazu Johmura, Tomomi Kanai, Yasuhiro Nakano, Taketomo Kido, Etsuo A. Susaki, Takuya Nakajima, Shigeyuki Shichino, Satoshi Ueha, Manabu Ozawa, Kisho Yokote, Soichiro Kumamoto, Atsuya Nishiyama, Takeharu Sakamoto, Kiyoshi Yamaguchi, Seira Hatakeyama, Eigo Shimizu, Kotoe Katayama, Yasuhiro Yamada, Satoshi Yamazaki, Kanako Iwasaki, Chika Miyoshi, Hiromasa Funato, Masashi Yanagisawa, Hiroo Ueno, Seiya Imoto, Yoichi Furukawa, Nobuaki Yoshida, Kouji Matsushima, Hiroki R. Ueda, Atsushi Miyajima, Makoto Nakanishi - Cell Metabolism 2020 被引用: 194
- Versatile whole-organ/body staining and imaging based on electrolyte-gel properties of biological tissues
著者: Etsuo A. Susaki, Chika Shimizu, Akihiro Kuno, Kazuki Tainaka, Xiang Li, Kengo Nishi, Ken Morishima, H. Ono, Koji L. Ode, Yuki Saeki, Kazunari Miyamichi, Kaoru Isa, Chihiro Yokoyama, Hiroki Kitaura, Masako Ikemura, Tetsuo Ushiku, Yoshihiro Shimizu, Takashi Saito, Takaomi C. Saido, Masashi Fukayama, Hirotaka Onoe, Kazushige Touhara, Tadashi Isa, Akiyoshi Kakita, Mitsuhiro Shibayama, Hiroki R. Ueda - Nature Communications 2020 被引用: 318
- A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues
著者: Adam K. Glaser, Kevin W. Bishop, Lindsey A. Barner, Etsuo A. Susaki, Shimpei I. Kubota, Gan Gao, Robert Serafin, Pooja Balaram, Emily Turschak, Philip R. Nicovich, Hoyin Lai, Luciano Lucas, Yating Yi, Eva K. Nichols, Hongyi Huang, Nicholas P. Reder, Jasmine Wilson, Ramya Sivakumar, Elya A. Shamskhou, Caleb Stoltzfus, Xing Wei, Andrew K Hempton, Marko Pende, Prayag Murawala, Hans‐Ulrich Dodt, Takato Imaizumi, Jay Shendure, Brian J. Beliveau, Michael Y. Gerner, Xin Li, Hu Zhao, Lawrence D. True, R. Clay Reid, Jayaram Chandrashekar, Hiroki R. Ueda, Karel Svoboda, Jonathan Liu - Nature Methods 2022 被引用: 177
- Tissue clearing
著者: Douglas S. Richardson, Webster Guan, Katsuhiko Matsumoto, Chenchen Pan, Kwanghun Chung, Ali Ertürk, Hiroki R. Ueda, Jeff W. Lichtman - Nature Reviews Methods Primers 2021 被引用: 189
- Chemical Landscape for Tissue Clearing Based on Hydrophilic Reagents
著者: Kazuki Tainaka, Tatsuya C. Murakami, Etsuo A. Susaki, Chika Shimizu, Rie Saito, Kei Takahashi, Akiko Hayashi‐Takagi, Hiroshi Sekiya, Yasunobu Arima, Satoshi Nojima, Masako Ikemura, Tetsuo Ushiku, Yoshihiro Shimizu, Masaaki Murakami, Kenji F. Tanaka, Masamitsu Iino, Haruo Kasai, Toshikuni Sasaoka, Kazuto Kobayashi, Kohei Miyazono, Eiichi Morii, Tadashi Isa, Masashi Fukayama, Akiyoshi Kakita, Hiroki R. Ueda - Cell Reports 2018 被引用: 363
- Advanced CUBIC tissue clearing for whole-organ cell profiling
著者: Katsuhiko Matsumoto, Tomoki T. Mitani, Shuhei A. Horiguchi, Junichi Kaneshiro, Tatsuya C. Murakami, Tomoyuki Mano, Hiroshi Fujishima, Ayumu Konno, Tomonobu M. Watanabe, Hirokazu Hirai, Hiroki R. Ueda - Nature Protocols 2019 被引用: 285
- A three-dimensional single-cell-resolution whole-brain atlas using CUBIC-X expansion microscopy and tissue clearing
著者: Tatsuya C. Murakami, Tomoyuki Mano, Shu Saikawa, Shuhei A. Horiguchi, Daichi Shigeta, Kousuke Baba, Hiroshi Sekiya, Yoshihiro Shimizu, Kenji F. Tanaka, Hiroshi Kiyonari, Masamitsu Iino, Hideki Mochizuki, Kazuki Tainaka, Hiroki R. Ueda - Nature Neuroscience 2018 被引用: 307
- System-level identification of transcriptional circuits underlying mammalian circadian clocks
著者: Hiroki R. Ueda, Satoko Hayashi, Wenbin Chen, Motoaki Sano, Masayuki Machida, Yasufumi Shigeyoshi, Masamitsu Iino, Seiichi Hashimoto - Nature Genetics 2005 被引用: 800
- Guidelines for Genome-Scale Analysis of Biological Rhythms
著者: Michael E. Hughes, Katharine C. Abruzzi, Ravi Allada, Ron C. Anafi, Alaaddin Bulak Arpat, Gad Asher, Pierre Baldi, Charissa de Bekker, Deborah Bell‐Pedersen, Justin Blau, Steven R. Brown, M. Fernanda Ceriani, Zheng Chen, Joanna C. Chiu, Jüergen Cox, Alexander M. Crowell, Jason P. DeBruyne, Derk‐Jan Dijk, Luciano DiTacchio, Francis J. Doyle, Giles E. Duffield, Jay Dunlap, Kristin Eckel‐Mahan, Karyn A. Esser, Garret A. FitzGerald, Daniel B. Forger, Lauren J. Francey, Ying‐Hui Fu, Frédéric Gachon, David Gatfield, Paul de Goede, Susan S. Golden, Carla A. Green, John Harer, Stacey L. Harmer, Jeff Haspel, Michael H. Hastings, Hanspeter Herzel, Erik D. Herzog, Christy M. Hoffmann, Christian I. Hong, Jacob Hughey, Jennifer Hurley, Horacio O. de la Iglesia, Carl Hirschie Johnson, Steve A. Kay, Nobuya Koike, Karl Kornacker, Achim Kramer, Katja Lamia, Tanya Leise, Scott A. Lewis, Jiajia Li, Xiaodong Li, Andrew C. Liu, Jennifer Loros, Tami A. Martino, Jérôme S. Menet, Martha Merrow, Andrew J. Millar, Todd C. Mockler, Félix Naef, Emi Nagoshi, Michael N. Nitabach, María Olmedo, Dmitri A. Nusinow, Louis J. Ptáček, D.A.J. Rand, Akhilesh B. Reddy, María S. Robles, Till Roenneberg, Michael Rosbash, Marc D. Ruben, Samuel S. C. Rund, Aziz Sancar, Paolo Sassone‐Corsi, Amita Sehgal, Scott Sherrill-Mix, Debra J. Skene, Kai‐Florian Storch, Joseph S. Takahashi, Hiroki R. Ueda, Han Wang, Charles J. Weitz, Pål O. Westermark, Herman Wijnen, Ying Xu, Gang Wu, Seung Hee Yoo, Michael W. Young, Eric Erquan Zhang, T. Zieliński, John B. Hogenesch - Journal of Biological Rhythms 2017 被引用: 303
- Ubiquitination of phosphatidylethanolamine in organellar membranes
著者: Jun-Ichi Sakamaki, Koji L. Ode, Yoshitaka Kurikawa, Hiroki R. Ueda, Hayashi Yamamoto, Noboru Mizushima - Molecular Cell 2022 被引用: 80
- Whole-Brain Profiling of Cells and Circuits in Mammals by Tissue Clearing and Light-Sheet Microscopy
著者: Hiroki R. Ueda, Hans‐Ulrich Dodt, Pavel Osten, Michael N. Economo, Jayaram Chandrashekar, Philipp Keller - Neuron 2020 被引用: 228
- Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity
著者: Yohei Sasagawa, Itoshi Nikaido, Tetsutaro Hayashi, Hiroki Danno, Kenichiro D. Uno, Takeshi Imai, Hiroki R. Ueda - Genome biology 2013 被引用: 480
- Maintenance of self‐renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b
著者: Akiko Tsumura, Tomohiro Hayakawa, Yuichi Kumaki, Shin‐ichiro Takebayashi, Morito Sakaue, Chisa Matsuoka, Kunitada Shimotohno, Fuyuki Ishikawa, En Li, Hiroki R. Ueda, Jun‐ichi Nakayama, Masaki Okano - Genes to Cells 2006 被引用: 557
- Activation of Sympathetic Signaling in Macrophages Blocks Systemic Inflammation and Protects against Renal Ischemia-Reperfusion Injury
著者: S. Hasegawa, Tsuyoshi Inoue, Yasuna Nakamura, Daichi Fukaya, Rie Uni, Chia-Hsien Wu, Rie Fujii, Wachirasek Peerapanyasut, Akashi Taguchi, Takahide Kohro, Shintaro Yamada, Mikako Katagiri, Toshiyuki Ko, Seitaro Nomura, Atsuko Ozeki, Etsuo A. Susaki, Hiroki R. Ueda, Nobuyoshi Akimitsu, Youichiro Wada, Issei Komuro, Masaomi Nangaku, Reiko Inagi - Journal of the American Society of Nephrology 2021 被引用: 60
- Involvement of Ca2+-Dependent Hyperpolarization in Sleep Duration in Mammals
著者: Fumiya Tatsuki, Genshiro A. Sunagawa, Shoi Shi, Etsuo A. Susaki, Hiroko Yukinaga, Dimitri Perrin, Kenta Sumiyama, Maki Ukai‐Tadenuma, Hiroshi Fujishima, Rei-ichiro Ohno, Daisuke Tone, Koji L. Ode, Katsuhiko Matsumoto, Hiroki R. Ueda - Neuron 2016 被引用: 208
- The 103,200-arm acceleration dataset in the UK Biobank revealed a landscape of human sleep phenotypes
著者: Machiko Katori, Shoi Shi, Koji L. Ode, Yasuhiro Tomita, Hiroki R. Ueda - National Academy of Sciences, Proceedings of the National Academy of Sciences 2022 被引用: 81
- Chemical Principles in Tissue Clearing and Staining Protocols for Whole-Body Cell Profiling
著者: Kazuki Tainaka, Akihiro Kuno, Shimpei I. Kubota, Tatsuya C. Murakami, Hiroki R. Ueda - Annual Review of Cell and Developmental Biology 2016 被引用: 288
- NEK9 regulates primary cilia formation by acting as a selective autophagy adaptor for MYH9/myosin IIA
著者: Yasuhiro Yamamoto, Haruka Chino, Satoshi Tsukamoto, Koji L. Ode, Hiroki R. Ueda, Noboru Mizushima - Nature Communications 2021 被引用: 67
- A transcription factor response element for gene expression during circadian night
著者: Hiroki R. Ueda, Wenbin Chen, Akihito Adachi, Hisanori Wakamatsu, Satoko Hayashi, Tomohiro Takasugi, Mamoru Nagano, Ken‐ichi Nakahama, Yutaka Suzuki, Sumio Sugano, Masamitsu Iino, Yasufumi Shigeyoshi, Seiichi Hashimoto - Nature 2002 被引用: 872
- Whole-body and Whole-Organ Clearing and Imaging Techniques with Single-Cell Resolution: Toward Organism-Level Systems Biology in Mammals
著者: Etsuo A. Susaki, Hiroki R. Ueda - Cell chemical biology 2016 被引用: 301
