Jean-Philippe Vert
2001–2025 年に発表
- 別表記
- Jean‐Philippe Vert
- 144
- 論文数
- 21,342
- 被引用数
- 66
- h 指数
- 120
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Computer Science37.2%
- Biochemistry, Genetics and Molecular Biology37%
- Engineering7.1%
- Medicine4.9%
- Mathematics3%
- Agricultural and Biological Sciences2.6%
- その他8.2%
トピック
- Bioinformatics and Genomic Networks3.9%
- Gene expression and cancer classification3.5%
- Genomics and Chromatin Dynamics2.7%
- Computational Drug Discovery Methods2.6%
- Genomics and Phylogenetic Studies2.6%
- Machine Learning in Bioinformatics2.2%
- その他82.5%
共著者
- Marco Cuturi17
- Francis R. Bach16
- William Stafford Noble15
- Laurent Jacob9
- Nelle Varoquaux8
- Olivier Teboul8
- Pierre Mahé8
- Emmanuel Barillot7
- Tatsuya Akutsu7
- Quentin Berthet6
- Laetitia Meng-Papaxanthos5
- Mathieu Blondel5
- Mikhail Zaslavskiy5
- Minoru Kanehisa5
- Ran Zhang5
- Valentina Boeva5
- Yoshihiro Yamanishi5
- Fantine Mordelet4
- Ferhat Ay4
- Gérard Biau4
- Isabelle Janoueix-Lerosey4
- Nobuhisa Ueda4
- Olivier Delattre4
- Tomoko Matsui4
全論文
- HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
著者: Nicolas Servant, Nelle Varoquaux, Bryan R. Lajoie, Eric Viara, Chong-Jian Chen, Jean‐Philippe Vert, Édith Heard, Job Dekker, Emmanuel Barillot - Genome biology 2015 被引用: 2,873
- A general and flexible method for signal extraction from single-cell RNA-seq data
著者: Davide Risso, Fanny Perraudeau, Svetlana Gribkova, Sandrine Dudoit, Jean‐Philippe Vert - Nature Communications 2018 被引用: 838
- Efficient and Modular Implicit Differentiation
著者: Mathieu Blondel, Quentin Berthet, Marco Cuturi, Roy Frostig, Stephan Hoyer, Felipe Llinares-López, Fabian Pedregosa, Jean-Philippe Vert - Advances in Neural Information Processing Systems 35, NeurIPS 2022 被引用: 360
- DeepConsensus improves the accuracy of sequences with a gap-aware sequence transformer
著者: Gunjan Baid, Daniel E. Cook, Kishwar Shafin, Taedong Yun, Felipe Llinares-López, Quentin Berthet, Anastasiya Belyaeva, Armin Töpfer, Aaron M. Wenger, William J. Rowell, Howard H. Yang, Alexey Kolesnikov, Waleed Ammar, Jean‐Philippe Vert, Ashish Vaswani, Cory Y. McLean, Maria Nattestad, Pi-Chuan Chang, Andrew Carroll - Nature Biotechnology 2022 被引用: 153
- A bagging SVM to learn from positive and unlabeled examples
著者: Fantine Mordelet, Jean-Philippe Vert - Pattern Recognition Letters, Pattern Recognit. Lett. 2013 被引用: 332
- Consistency of random forests
著者: Erwan Scornet, Gérard Biau, Jean‐Philippe Vert - The Annals of Statistics 2015 被引用: 568
- TIGRESS: Trustful Inference of Gene REgulation using Stability Selection
著者: Anne-Claire Haury, Fantine Mordelet, Paola Vera-Licona, Jean-Philippe Vert - BMC Systems Biology, BMC Syst. Biol. 2012 被引用: 449
- Protein-ligand interaction prediction: an improved chemogenomics approach
著者: Laurent Jacob, Jean-Philippe Vert - Bioinformatics, Bioinform. 2008 被引用: 386
- Learning to Discover Cross-Domain Relations with Generative Adversarial Networks
著者: Jie Liu, Yuanhao Huang, Ritambhara Singh, Jean-Philippe Vert, William Stafford Noble - ICML 2017 被引用: 2,101
- How will generative AI disrupt data science in drug discovery?
著者: Jean‐Philippe Vert - Nature Biotechnology 2023 被引用: 75
- AI-based mobile application to fight antibiotic resistance
著者: Marco Pascucci, Guilhem Royer, Jakub Adámek, M Al Asmar, David Aristizabal, Laetitia Blanche, Amine Bezzarga, Guillaume Boniface-Chang, Alex Brunner, Christian Curel, Gabriel Dulac-Arnold, Rasheed M. Fakhri, Nada Malou, Clara Nordon, Vincent Runge, Franck Samson, Ellen Sebastian, Dena Soukieh, Jean‐Philippe Vert, Christophe Ambroise, Mohammed‐Amin Madoui - Nature Communications 2021 被引用: 92
- A Path Following Algorithm for the Graph Matching Problem
著者: Mikhail Zaslavskiy, Francis R. Bach, Jean-Philippe Vert - IEEE Transactions on Pattern Analysis and Machine Intelligence, IEEE Trans. Pattern Anal. Mach. Intell. 2008 被引用: 399
- Group lasso with overlap and graph lasso
著者: Laurent Jacob, Guillaume Obozinski, Jean-Philippe Vert - Conference on Machine Learning, ICML 2009 被引用: 868
- Deep embedding and alignment of protein sequences
著者: Felipe Llinares-López, Quentin Berthet, Mathieu Blondel, Olivier Teboul, Jean‐Philippe Vert - Nature Methods 2022 被引用: 59
- An accurate and interpretable model for siRNA efficacy prediction
著者: Jean-Philippe Vert, Nicolas Foveau, Christian Lajaunie, Yves Vandenbrouck - BMC Bioinformatics, BMC Bioinform. 2006 被引用: 323
- Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications
著者: Koen Van den Berge, Fanny Perraudeau, Charlotte Soneson, Michael I. Love, Davide Risso, Jean‐Philippe Vert, Mark D. Robinson, Sandrine Dudoit, Lieven Clement - Genome biology 2018 被引用: 278
- The Influence of Feature Selection Methods on Accuracy, Stability and Interpretability of Molecular Signatures
著者: Anne-Claire Haury, Pierre Gestraud, Jean‐Philippe Vert - PLoS ONE 2011 被引用: 382
- Kernel Methods in Computational Biology
著者: Jean‐Philippe Vert, 阿久津, 達也 - The MIT Press eBooks 2004 被引用: 1,034
- A statistical approach for inferring the 3D structure of the genome
著者: Nelle Varoquaux, Ferhat Ay, William Stafford Noble, Jean-Philippe Vert - Bioinformatics, Bioinform. 2014 被引用: 277
- Transcriptional Programs Define Intratumoral Heterogeneity of Ewing Sarcoma at Single-Cell Resolution
著者: Marie-Ming Aynaud, Olivier Mirabeau, Nadège Gruel, Sandrine Grossetête, Valentina Boeva, Simon Durand, Didier Surdez, Olivier Saulnier, Sakina Zaïdi, Svetlana Gribkova, Aziz Fouché, Ulykbek Kairov, Virginie Raynal, Franck Tirode, Thomas G. P. Grünewald, Mylène Bohec, Sylvain Baulande, Isabelle Janoueix‐Lerosey, Jean‐Philippe Vert, Emmanuel Barillot, Olivier Delattre, Andreï Zinovyev - Cell Reports 2020 被引用: 153
- Group Lasso with Overlaps: the Latent Group Lasso approach
著者: Guillaume Obozinski, Laurent Jacob, Jean-Philippe Vert - arXiv (Cornell University), CoRR 2011 被引用: 130
- Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization
著者: Valentina Boeva, Andrei Yu. Zinovyev, Kevin Bleakley, Jean-Philippe Vert, Isabelle Janoueix-Lerosey, Olivier Delattre, Emmanuel Barillot - Bioinformatics, Bioinform. 2010 被引用: 280
- A Kernel for Time Series Based on Global Alignments
著者: Marco Cuturi, Jean-Philippe Vert, Øystein Birkenes, Tomoko Matsui - IEEE International Conference on Acoustics, Speech and Signal Processing - ICASSP '07, ICASSP (2) 2007 被引用: 230
- ProDiGe: PRioritization Of Disease Genes with multitask machine learning from positive and unlabeled examples
著者: Fantine Mordelet, Jean-Philippe Vert - BMC Bioinformatics, BMC Bioinform. 2011 被引用: 182
