John R. Spear
2005–2022 年に発表
- 26
- 論文数
- 30,052
- 被引用数
- 26
- h 指数
- 26
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology42%
- Environmental Science18.3%
- Medicine13.5%
- Agricultural and Biological Sciences12.8%
- Immunology and Microbiology4.4%
- Dentistry2.3%
- その他6.7%
トピック
- Gut microbiota and health18.7%
- Microbial Community Ecology and Physiology6%
- Genomics and Phylogenetic Studies3.5%
- Clostridium difficile and Clostridium perfringens research3.1%
- Probiotics and Fermented Foods2.9%
- Diet and metabolism studies2.5%
- その他63.3%
共著者
- Norman R. Pace7
- J. Kirk Harris6
- Alexis S. Templeton4
- Andrés Mauricio Caraballo‐Rodríguez4
- Asker Brejnrod4
- Benjamin J. Callahan4
- C. Titus Brown4
- Christian C. Abnet4
- Christian F. Edwardson4
- Claire Duvallet4
- Colin Brislawn4
- Daniel M. Durall4
- Emily K. Cope4
- Eric J. Alm4
- Eric S. Boyd4
- Evan Bolyen4
- Francesco Asnicar4
- Gabriel A. Al‐Ghalith4
- Gavin M. Douglas4
- Harriet Alexander4
- Jai Ram Rideout4
- Jeffrey J. Walker4
- Jennifer Fouquier4
- John Chase4
全論文
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters ほか 12 名 - Nature Biotechnology 2019 被引用: 24,006
- Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters ほか 12 名 - Nature Biotechnology 2019 被引用: 874
- BugBase predicts organism-level microbiome phenotypes
著者: Tonya Ward, J E Larson, Jeremy Meulemans, Ben Hillmann, Joshua Lynch, Dimitrios N. Sidiropoulos, John R. Spear, Greg Caporaso, Ran Blekhman, Rob Knight, Ryan C. Fink, Dan Knights - 2017 被引用: 492
- QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang ほか 9 名 - 2018 被引用: 883
- QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
著者: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang ほか 10 名 - 2018 被引用: 584
- Ancestral Absence of Electron Transport Chains in Patescibacteria and DPANN
著者: Jacob P. Beam, Eric D. Becraft, Julia M. Brown, Frederik Schulz, Jessica K. Jarett, Oliver Bezuidt, Nicole Poulton, Kayla Clark, Peter F. Dunfield, Nikolai V. Ravin, John R. Spear, Brian P. Hedlund, Konstantinos Ar. Kormas, Stefan M. Sievert, Mostafa S. Elshahed, Hazel A. Barton, Matthew B. Stott, Jonathan A. Eisen, Duane P. Moser, T. C. Onstott, Tanja Woyke, Ramūnas Stepanauskas - Frontiers in Microbiology 2020 被引用: 114
- Deep-branching acetogens in serpentinized subsurface fluids of Oman
著者: Daniel R. Colman, E. Kraus, Patrick H. Thieringer, Kaitlin R. Rempfert, Alexis S. Templeton, John R. Spear, Eric S. Boyd - National Academy of Sciences, Proceedings of the National Academy of Sciences 2022 被引用: 41
- Unexpected Diversity and Complexity of the Guerrero Negro Hypersaline Microbial Mat
著者: Ruth E. Ley, J. Kirk Harris, Joshua Wilcox, John R. Spear, Scott R. Miller, Brad M. Bebout, Julia A. Maresca, Donald A. Bryant, Mitchell L. Sogin, Norman R. Pace - Applied and Environmental Microbiology 2006 被引用: 476
- Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat
著者: J. Kirk Harris, J. Gregory Caporaso, Jeffrey J. Walker, John R. Spear, Nicholas J Gold, Charles E. Robertson, Philip Hugenholtz, Julia K. Goodrich, Daniel McDonald, Dan Knights, Paul Marshall, Henry M. Tufo, Rob Knight, Norman R. Pace - The ISME Journal 2012 被引用: 240
- Insights into the dynamics between viruses and their hosts in a hot spring microbial mat
著者: Jessica Jarett, Mária Džunková, Frederik Schulz, Simon Roux, David Páez-Espino, Emiley A. Eloe‐Fadrosh, Sean P. Jungbluth, Natalia Ivanova, John R. Spear, Stephanie Carr, Christopher B. Trivedi, Frank A. Corsetti, Hope A. Johnson, Eric D. Becraft, Nikos C. Kyrpides, Ramūnas Stepanauskas, Tanja Woyke - The ISME Journal 2020 被引用: 79
- Sulfate reducing bacteria in microbial mats: Changing paradigms, new discoveries
著者: Laura K. Baumgartner, R. Pamela Reid, Christophe Dupraz, Alan W. Decho, Daniel H. Buckley, John R. Spear, Kristen M. Przekop, Pieter T. Visscher - Sedimentary Geology 2006 被引用: 410
- Hydrogen and bioenergetics in the Yellowstone geothermal ecosystem
著者: John R. Spear, Jeffrey J. Walker, T. M. McCollom, Norman R. Pace - National Academy of Sciences, Proceedings of the National Academy of Sciences 2005 被引用: 363
- Microbial Metabolic Redundancy Is a Key Mechanism in a Sulfur-Rich Glacial Ecosystem
著者: Christopher B. Trivedi, Blake W. Stamps, Graham Lau, Stephen E. Grasby, Alexis S. Templeton, John R. Spear - mSystems 2020 被引用: 39
- Influence of sulfate reducing bacterial biofilm on corrosion behavior of low-alloy, high-strength steel (API-5L X80)
著者: Faisal M. Alabbas, Charles H. D. Williamson, Shaily M. Bhola, John R. Spear, David L. Olson, Brajendra Mishra, Anthony E. Kakpovbia - International Biodeterioration & Biodegradation 2013 被引用: 229
- Millimeter‐scale genetic gradients and community‐level molecular convergence in a hypersaline microbial mat
著者: Victor Kunin, Jeroen Raes, J. Kirk Harris, John R. Spear, Jeffrey J. Walker, Natalia Ivanova, Christian von Mering, Brad M. Bebout, Norman R. Pace, Peer Bork, Philip Hugenholtz - Molecular Systems Biology 2008 被引用: 150
- Subsurface Microbial Diversity in Deep-Granitic-Fracture Water in Colorado
著者: Jason W. Sahl, Raleigh Schmidt, Elizabeth D. Swanner, Kevin W. Mandernack, Alexis S. Templeton, Thomas L. Kieft, Richard L. Smith, W. E. Sanford, Robert L. Callaghan, Jeffry B. Mitton, John R. Spear - Applied and Environmental Microbiology 2007 被引用: 132
- Geobiology of a microbial endolithic community in the Yellowstone geothermal environment
著者: Jeffrey J. Walker, John R. Spear, Norman R. Pace - Nature 2005 被引用: 225
- Phylogenetic diversity and ecology of environmental Archaea
著者: Charles E. Robertson, J. Kirk Harris, John R. Spear, Norman R. Pace - Current Opinion in Microbiology 2005 被引用: 150
- Diversity and Stratification of Archaea in a Hypersaline Microbial Mat
著者: Charles E. Robertson, John R. Spear, J. Kirk Harris, Norman R. Pace - Applied and Environmental Microbiology 2008 被引用: 105
- Physiological adaptations to serpentinization in the Samail Ophiolite, Oman
著者: Elizabeth M. Fones, Daniel R. Colman, E. Kraus, Daniel B. Nothaft, Saroj Poudel, Kaitlin R. Rempfert, John R. Spear, Alexis S. Templeton, Eric S. Boyd - The ISME Journal 2019 被引用: 80
- Contrasting Patterns of Community Assembly in the Stratified Water Column of Great Salt Lake, Utah
著者: Jonathan E. Meuser, Bonnie K. Baxter, John R. Spear, John W. Peters, Matthew C. Posewitz, Eric S. Boyd - Microbial Ecology 2013 被引用: 78
- Genomic Analysis of the Yet-Uncultured Binatota Reveals Broad Methylotrophic, Alkane-Degradation, and Pigment Production Capacities
著者: Chelsea L. Murphy, Andriy Sheremet, Peter F. Dunfield, John R. Spear, Ramūnas Stepanauskas, Tanja Woyke, Mostafa S. Elshahed, Noha H. Youssef - mBio 2021 被引用: 33
- Comparison of Normalization Methods for Construction of Large, Multiplex Amplicon Pools for Next-Generation Sequencing
著者: J. Kirk Harris, Jason W. Sahl, Todd A. Castoe, Brandie D. Wagner, David D. Pollock, John R. Spear - Applied and Environmental Microbiology 2010 被引用: 90
- Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
著者: William P. Inskeep, Zackary J. Jay, Markus J. Herrgård, Mark A. Kozubal, Douglas B. Rusch, Susannah G. Tringe, Richard E. Macur, Ryan deM. Jennings, Eric S. Boyd, John R. Spear, Francisco F. Roberto - Frontiers in Microbiology 2013 被引用: 78
