Knut Reinert
1996–2026 年に発表
- 141
- 論文数
- 24,768
- 被引用数
- 49
- h 指数
- 87
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology65%
- Medicine8.1%
- Chemistry6.1%
- Computer Science5.7%
- Agricultural and Biological Sciences5.2%
- Immunology and Microbiology2.1%
- その他7.8%
トピック
- Genomics and Phylogenetic Studies10%
- RNA and protein synthesis mechanisms5%
- Chromosomal and Genetic Variations3.8%
- Advanced Proteomics Techniques and Applications2.6%
- Metabolomics and Mass Spectrometry Studies2.4%
- Algorithms and Data Compression2.3%
- その他73.9%
共著者
- Oliver Kohlbacher23
- David Weese18
- Gunnar W. Klau12
- Aaron L. Halpern10
- Christian G. Huber10
- Daniel H. Huson9
- Anne-Katrin Emde8
- Clemens Gröpl8
- Eugene W. Myers8
- Martin Vingron8
- Hans-Peter Lenhof7
- Ole Schulz-Trieglaff7
- Ulf Leser7
- Enrico Seiler6
- Granger G. Sutton6
- Markus Bauer6
- René Rahn6
- Tobias Rausch6
- Andreas Döring5
- Birte Kehr5
- Enrico Siragusa5
- Eva Lange5
- Manuel Holtgrewe5
- Somayeh Mohammadi5
全論文
- The Sequence of the Human Genome
著者: J. Craig Venter, Mark D. Adams, Eugene W. Myers, Peter W. Li, Richard Mural, Granger G. Sutton, Hamilton O. Smith, Mark Yandell, Cheryl Evans, Robert A. Holt, Jeannine D. Gocayne, Peter G. Amanatides, Richard M. Ballew, Daniel H. Huson, Jennifer R. Wortman, Qing Zhang, Chinnappa D. Kodira, Xiangqun Zheng-Bradley, Lin Chen, Marian Skupski, G. Subramanian, Paul D. Thomas, Jinghui Zhang, George L. Gabor Miklos, Catherine R. Nelson, Samuel Broder, Andrew G. Clark, Joe Nadeau, Victor A. McKusick, Norton D. Zinder, Arnold J. Levine, Richard J. Roberts, Mel I. Simon, Carolyn W. Slayman, Michael W. Hunkapiller, Randall Bolanos, Arthur L. Delcher, Ian Dew, Daniel Fasulo, Michael J. Flanigan, Liliana Florea, Aaron L. Halpern, Sridhar Hannenhalli, Saul Kravitz, Samuel Lévy, Clark Mobarry, Knut Reinert, Karin Remington, Jane Abu-Threideh, Ellen M. Beasley, Kendra Biddick, Vivien Bonazzi, Rhonda Brandon, Michele Cargill, Ishwar Chandramouliswaran, Rosane Charlab, Kabir Chaturvedi, Zuoming Deng, Valentina Di Francesco, Patrick Dunn, Karen Eilbeck, Carlos Evangelista, Andrei Gabrielian, Weiniu Gan, Wangmao Ge, Fangcheng Gong, Zhiping Gu, Ping Guan, Thomas J. Heiman, Maureen E. Higgins, Rui‐Ru Ji, Zhaoxi Ke, Karen A. Ketchum, Zhongwu Lai, Yiding Lei, Zhenya Li, Jiayin Li, Yong Liang, Xiaoying Lin, Fu Lu, Gennady V. Merkulov, Natalia V. Milshina, Helen M. Moore, Ashwinikumar K. Naik, Vaibhav A. Narayan, Beena Neelam, Deborah Nusskern, Douglas B. Rusch, Steven L. Salzberg, Wei Shao, Bixiong Chris Shue, Jing‐Tao Sun, Zhen Yuan Wang, Aihui Wang, Xin Wang, Jian Wang, Ming-Hui Wei, Ron Wides, Chunlin Xiao, Chunhua Yan ほか 173 名 - Science 2001 被引用: 13,699
- Critical Assessment of Metagenome Interpretation: the second round of challenges
著者: Fernando Meyer, Adrian Fritz, Zhi-Luo Deng, David Koslicki, Till Robin Lesker, Alexey Gurevich, Gary Robertson, Mohammed Alser, Dmitry Antipov, Francesco Beghini, Denis Bertrand, Jaqueline Brito, C. Titus Brown, Jan P. Buchmann, Aydın Buluç, Bo Chen, Rayan Chikhi, Philip T. L. C. Clausen, Alexandru Cristian, Piotr Wojciech Dąbrowski, Aaron E. Darling, Rob Egan, Eleazar Eskin, Evangelos Georganas, Eugene Goltsman, Melissa A. Gray, Lars Hestbjerg Hansen, Steven Hofmeyr, Pingqin Huang, Luiz Irber, Huijue Jia, Tue Sparholt Jørgensen, Silas Kieser, Terje Klemetsen, Axel Kola, Mikhail Kolmogorov, Anton Korobeynikov, Jason C. Kwan, Nathan LaPierre, Claire Lemaitre, Chenhao Li, Antoine Limasset, Fábio Malcher Miranda, Serghei Mangul, Vanessa R. Marcelino, Camille Marchet, Pierre Marijon, Dmitry Meleshko, Daniel R. Mende, Alessio Milanese, Niranjan Nagarajan, Jakob Nybo Nissen, Sergey Nurk, Leonid Oliker, Lucas Paoli, Pierre Peterlongo, Vitor C. Piro, Jacob S. Porter, Simon Rasmussen, Evan Rees, Knut Reinert, Bernhard Y. Renard, Espen Mikal Robertsen, Gail Rosen, Hans‐Joachim Ruscheweyh, Varuni Sarwal, Nicola Segata, Enrico Seiler, Lizhen Shi, Fengzhu Sun, Shinichi Sunagawa, Søren J. Sørensen, Ashleigh Thomas, Chengxuan Tong, Mirko Trajkovski, Julien Tremblay, Gherman Uritskiy, Riccardo Vicedomini, Zhengyang Wang, Ziye Wang, Zhong Wang, Andrew Warren, Nils Peder Willassen, Katherine Yelick, Ronghui You, Georg Zeller, Zhengqiao Zhao, Shanfeng Zhu, Jie Zhu, Rubén Garrido‐Oter, Petra Gastmeier, Stéphane Hacquard, Susanne Häußler, Ariane Khaledi, Friederike Maechler, Fantin Mesny, Simona Radutoiu, Paul Schulze‐Lefert, Nathiana Smit, Till Strowig ほか 3 名 - Nature Methods 2022 被引用: 396
- OpenMS: a flexible open-source software platform for mass spectrometry data analysis
著者: Hannes Röst, Timo Sachsenberg, Stephan Aiche, Chris Bielow, Hendrik Weisser, Fabian Aicheler, Sandro Andreotti, Hans‐Christian Ehrlich, Petra Gutenbrunner, Erhan Kenar, Xiao Liang, Sven Nahnsen, Lars Nilse, Julianus Pfeuffer, George Rosenberger, Marc Rurik, Uwe Schmitt, J. Veit, Mathias Walzer, David Wojnar, Witold Wolski, Oliver Schilling, Jyoti S. Choudhary, Lars Malmström, Ruedi Aebersold, Knut Reinert, Oliver Kohlbacher - Nature Methods 2016 被引用: 751
- GenMap: ultra-fast computation of genome mappability
著者: Christopher Pockrandt, Mai Alzamel, Costas S. Iliopoulos, Knut Reinert - Bioinformatics, Bioinform. 2020 被引用: 255
- Recent Segmental Duplications in the Human Genome
著者: Jeffrey A. Bailey, Zhiping Gu, Royden A. Clark, Knut Reinert, Rhea U. Vallente, Stuart Schwartz, Mark D. Adams, Eugene W. Myers, Peter W. Li, Evan E. Eichler - Science 2002 被引用: 1,411
- Flexbar 3.0 - SIMD and multicore parallelization
著者: Johannes T. Roehr, Christoph Dieterich, Knut Reinert - Bioinformatics, Bioinform. 2017 被引用: 216
- OpenMS - An open-source software framework for mass spectrometry
著者: Marc Sturm, Andreas Bertsch, Clemens Gröpl, Andreas Hildebrandt, Rene Hussong, Eva Lange, Nico Pfeifer, Ole Schulz-Trieglaff, Alexandra Zerck, Knut Reinert, Oliver Kohlbacher - BMC Bioinformatics, BMC Bioinform. 2008 被引用: 661
- Computational Pan-Genomics: Status, Promises and Challenges
著者: Tobias Marschall, Manja Marz, Thomas Abeel, Louis Dijkstra, Bas E. Dutilh, Ali Ghaffaari, Paul Kersey, Wigard P. Kloosterman, Veli Mäkinen, Adam M. Novak, Benedict Paten, David Porubskỳ, Éric Rivals, Can Alkan, Jasmijn A. Baaijens, Paul I. W. de Bakker, Valentina Boeva, Raoul J.P. Bonnal, Francesca Chiaromonte, Rayan Chikhi, Francesca D. Ciccarelli, Robin Cijvat, Erwin Datema, Cornelia M. van Duijn, Evan E. Eichler, Corinna Ernst, Eleazar Eskin, Erik Garrison, Mohammed El-Kebir, Gunnar W. Klau, Jan O. Korbel, Eric-Wubbo Lameijer, Ben Langmead, Marcel Martin, Paul Medvedev, John C. Mu, Pieter B. Neerincx, Klaasjan G. Ouwens, Pierre Peterlongo, Nadia Pisanti, Sven Rahmann, Benjamin J. Raphael, Knut Reinert, Dick de Ridder, Jeroen de Ridder, Matthias Schlesner, Ole Schulz-Trieglaff, Ashley D. Sanders, Siavash Sheikhizadeh, Carl Shneider, Sandra Smit, Daniel Valenzuela, Jiayin Wang, Lodewyk F.A. Wessels, Ying Zhang, Victor Guryev, Fabio Vandin, Kai Ye, Alexander Schönhuth - 2016 被引用: 151
- A Whole-Genome Assembly of Drosophila
著者: Eugene W. Myers, Granger G. Sutton, Art L. Delcher, Ian Dew, Dan P. Fasulo, Michael J. Flanigan, Saul Kravitz, Clark Mobarry, Knut Reinert, Karin Remington, Eric L. Anson, Randall Bolanos, Hui-Hsien Chou, Catherine Jordan, Aaron L. Halpern, Stefano Lonardi, Ellen M. Beasley, Rhonda Brandon, Lin Chen, Patrick Dunn, Zhongwu Lai, Yong Liang, Deborah Nusskern, Ming Zhan, Qing Zhang, Xiangqun Zheng-Bradley, Gerald M. Rubin, Mark D. Adams, J. Craig Venter - Science 2000 被引用: 1,588
- SeqAn An efficient, generic C++ library for sequence analysis
著者: Andreas Döring, David Weese, Tobias Rausch, Knut Reinert - BMC Bioinformatics, BMC Bioinform. 2008 被引用: 353
- The SeqAn C++ template library for efficient sequence analysis: A resource for programmers
著者: Knut Reinert, Temesgen Hailemariam Dadi, Marcel Ehrhardt, Hannes Hauswedell, Svenja Mehringer, René Rahn, Jongkyu Kim, Christopher Pockrandt, Jörg Winkler, Enrico Siragusa, Gianvito Urgese, David Weese - Journal of Biotechnology 2017 被引用: 122
- Generic accelerated sequence alignment in SeqAn using vectorization and multi-threading
著者: René Rahn, Stefan Budach, Pascal Costanza, Marcel Ehrhardt, Jonny Hancox, Knut Reinert - Bioinformatics, Bioinform. 2018 被引用: 49
- Critical Assessment of Metagenome Interpretation - the second round of challenges
著者: Fernando Meyer, Adrian Fritz, Zhi-Luo Deng, David Koslicki, Alexey Gurevich, Gary Robertson, Mohammed Alser, Dmitry Antipov, Francesco Beghini, Denis Bertrand, Jaqueline Brito, Christopher T. Brown, Jan P. Buchmann, Aydın Buluç, B. Chen, Rayan Chikhi, Philip T. L. C. Clausen, A. Cristian, Piotr Wojciech Dąbrowski, Aaron E. Darling, Rob Egan, Eleazar Eskin, Evangelos Georganas, Eugene Goltsman, Melissa A. Gray, Lars Hestbjerg Hansen, Steven Hofmeyr, Pei‐Qiang Huang, Luiz Irber, Huijue Jia, Tue Sparholt Jørgensen, Silas Kieser, Terje Klemetsen, Axel Kola, Mikhail Kolmogorov, Anton Korobeynikov, Jason C. Kwan, Nathan LaPierre, Claire Lemaitre, Changan Li, Antoine Limasset, Fábio Malcher Miranda, Serghei Mangul, Vanessa R. Marcelino, Camille Marchet, Pierre Marijon, Dmitry Meleshko, Daniel R. Mende, Alessio Milanese, Niranjan Nagarajan, Jakob Nybo Nissen, Sergey Nurk, Leonid Oliker, Lucas Paoli, Pierre Peterlongo, Vitor C. Piro, Jacob Porter, Simon Rasmussen, Evan Rees, Knut Reinert, Bernhard Y. Renard, Espen Mikal Robertsen, Gail Rosen, Hans‐Joachim Ruscheweyh, Varuni Sarwal, Nicola Segata, Enrico Seiler, Lizhen Shi, Fengzhu Sun, Shinichi Sunagawa, Søren J. Sørensen, Ashleigh Thomas, Catherine Tong, Mirko Trajkovski, Julien Tremblay, Gherman Uritskiy, Riccardo Vicedomini, Zi. Wang, Zhe Wang, Zho. Wang, Andrew Warren, Nils Peder Willassen, Katherine Yelick, Ronghui You, Georg Zeller, Zhengyi Zhao, Shanfeng Zhu, Jie Zhu, Rubén Garrido‐Oter, Petra Gastmeier, Stéphane Hacquard, Susanne Häußler, Ariane Khaledi, Friederike Maechler, Fantin Mesny, Simona Radutoiu, Paul Schulze‐Lefert, Nathiana Smit, Till Strowig, Andreas Bremges ほか 2 名 - 2021 被引用: 45
- Reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data using Decoil
著者: Mădălina Giurgiu, Nadine Wittstruck, Elias Rodríguez-Fos, Rocío Chamorro González, Lotte Brückner, Annabell Szymansky, Konstantin Helmsauer, Anne Hartebrodt, Philipp Euskirchen, Richard P. Koche, Kerstin Haase, Knut Reinert, Anton G. Henssen - Genome Research 2024 被引用: 22
- A multi-view latent variable model reveals cellular heterogeneity in complex tissues for paired multimodal single-cell data
著者: Yuwei Wang, Bin Lian, Haohui Zhang, Yuanke Zhong, Jie He, Fashuai Wu, Knut Reinert, Xuequn Shang, Hui Yang, Jialu Hu - Bioinformatics, Bioinform. 2023 被引用: 22
- Integration Preferences of Wildtype AAV-2 for Consensus Rep-Binding Sites at Numerous Loci in the Human Genome
著者: Daniela Hüser, Andreas Gogol‐Döring, Timo Lutter, Stefan Weger, Kerstin Winter, Eva-Maria Hammer, Toni Cathomen, Knut Reinert, Regine Heilbronn - PLoS Pathogens 2010 被引用: 90
- Tools for Label-free Peptide Quantification
著者: Sven Nahnsen, Chris Bielow, Knut Reinert, Oliver Kohlbacher - Molecular & Cellular Proteomics 2012 被引用: 226
- Alignment of Next-Generation Sequencing Reads
著者: Knut Reinert, Ben Langmead, David Weese, Dirk J. Evers - Annual Review of Genomics and Human Genetics 2015 被引用: 125
- OpenMS – A platform for reproducible analysis of mass spectrometry data
著者: Julianus Pfeuffer, Timo Sachsenberg, Oliver Alka, Mathias Walzer, Alexander Fillbrunn, Lars Nilse, Oliver Schilling, Knut Reinert, Oliver Kohlbacher - Journal of Biotechnology 2017 被引用: 118
- Concentration and chemical form of dietary zinc shape the porcine colon microbiome, its functional capacity and antibiotic resistance gene repertoire
著者: Robert Pieper, Temesgen Hailemariam Dadi, Laura Pieper, Wilfried Vahjen, André Franke, Knut Reinert, Jürgen Zentek - The ISME Journal 2020 被引用: 65
- Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research
著者: Franziska Hufsky, Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman, Jan Baumbach, Niko Beerenwinkel, Christian Brandt, Marco Cacciabue, Sara Chuguransky, Oliver Drechsel, Robert D. Finn, Adrian Fritz, Stephan Fuchs, Georges Hattab, Anne-Christin Hauschild, Dominik Heider, Marie Hoffmann, Martin Hölzer, Stefan Hoops, Lars Kaderali, Ioanna Kalvari, Max von Kleist, Renó Kmiecinski, Denise Kühnert, Gorka Lasso, Pieter Libin, Markus List, Hannah F. Löchel, Maria Jesus Martin, Roman Martin, Julian O. Matschinske, Alice C. McHardy, Pedro Mendes, Jaina Mistry, Vincent Navratil, Eric P. Nawrocki, Áine Niamh O'toole, Nancy Ontiveros-Palacios, Anton I. Petrov, Guillermo Rangel-Pineros, Nicole Redaschi, Susanne Reimering, Knut Reinert, Alejandro Reyes, Lorna J. Richardson, David L. Robertson, Sepideh Sadegh, Joshua B. Singer, Kristof Theys, Chris Upton, Marius Welzel, Lowri Williams, Manja Marz - Briefings in Bioinformatics, Briefings Bioinform. 2020 被引用: 149
- Lambda: the local aligner for massive biological data
著者: Hannes Hauswedell, Jochen Singer, Knut Reinert - Bioinformatics, Bioinform. 2014 被引用: 85
- Hierarchical Interleaved Bloom Filter: enabling ultrafast, approximate sequence queries
著者: Svenja Mehringer, Enrico Seiler, Felix Droop, Mitra Darvish, René Rahn, Martin Vingron, Knut Reinert - Genome biology 2023 被引用: 15
- A mathematical programming approach for resource allocation of data analysis workflows on heterogeneous clusters
著者: Somayeh Mohammadi, Latif Pourkarimi, Felix Droop, Ninon De Mecquenem, Ulf Leser, Knut Reinert - The Journal of Supercomputing, J. Supercomput. 2023 被引用: 7
