Lincoln Stein
1993–2025 年に発表
- 176
- 論文数
- 66,930
- 被引用数
- 108
- h 指数
- 164
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology60.8%
- Medicine17.8%
- Computer Science5.1%
- Agricultural and Biological Sciences5%
- Immunology and Microbiology3%
- Neuroscience1.9%
- その他6.4%
トピック
- Bioinformatics and Genomic Networks6.1%
- Genomics and Phylogenetic Studies4.7%
- Gene expression and cancer classification3%
- Cancer Genomics and Diagnostics2.6%
- Biomedical Text Mining and Ontologies2.1%
- Computational Drug Discovery Methods1.8%
- その他79.7%
共著者
- Peter D’Eustachio28
- Guanming Wu25
- Doreen Ware20
- Henning Hermjakob18
- Lisa Matthews18
- Bijay Jassal16
- Marc Gillespie16
- Robin Haw15
- Bruce May13
- M Orlic-Milacic12
- Joel Weiser11
- Karen Rothfels11
- Pankaj Jaiswal11
- Veronica Shamovsky11
- Antonio Fabregat10
- Ewan Birney10
- Juancarlos Chan10
- Steve Rozen10
- Suzanna Lewis10
- Wen J. Chen10
- David Croft9
- Gary Schindelman9
- Hans-Michael Müller9
- Kimberly Van Auken9
全論文
- The reactome pathway knowledgebase 2022
著者: Marc Gillespie, Bijay Jassal, Ralf Stephan, M Orlic-Milacic, Karen Rothfels, Andrea Senff‐Ribeiro, Johannes Griss, Cristoffer Sevilla, Lisa Matthews, Chuqiao Gong, Chuan Deng, Thawfeek Varusai, Eliot Ragueneau, Yusra Haider, Bruce May, Veronica Shamovsky, Joel Weiser, Timothy Brunson, Nasim Sanati, Liam Beckman, Xiang Shao, Antonio Fabregat, Konstantinos Sidiropoulos, Julieth Murillo, Guilherme Viteri, Justin Cook, Solomon I. Shorser, Gary D. Bader, Emek Demir, Chris Sander, Robin Haw, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2021 被引用: 2,542
- The Reactome Pathway Knowledgebase 2024
著者: M Orlic-Milacic, Deidre Beavers, Patrick Conley, Chuqiao Gong, Marc Gillespie, Johannes Griss, Robin Haw, Bijay Jassal, Lisa Matthews, Bruce May, Robert Petryszak, Eliot Ragueneau, Karen Rothfels, Cristoffer Sevilla, Veronica Shamovsky, Ralf Stephan, Krishna Kumar Tiwari, Thawfeek Varusai, Joel Weiser, A. Jordan Wright, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research 2023 被引用: 1,339
- The Reactome pathway Knowledgebase
著者: Antonio Fabregat, Konstantinos Sidiropoulos, Phani Garapati, Marc Gillespie, Kerstin Hausmann, Robin Haw, Bijay Jassal, S Jupe, Florian Korninger, Sheldon McKay, Lisa Matthews, Bruce May, M Orlic-Milacic, Karen Rothfels, Veronica Shamovsky, Marissa Webber, Joel Weiser, Mark Williams, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2015 被引用: 6,014
- The reactome pathway knowledgebase
著者: Bijay Jassal, Lisa Matthews, Guilherme Viteri, Chuqiao Gong, Pascual Lorente, Antonio Fabregat, Konstantinos Sidiropoulos, Justin Cook, Marc Gillespie, Robin Haw, Fred Loney, Bruce May, M Orlic-Milacic, Karen Rothfels, Cristoffer Sevilla, Veronica Shamovsky, Solomon I. Shorser, Thawfeek Varusai, Joel Weiser, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2019 被引用: 2,363
- The Reactome Pathway Knowledgebase
著者: Antonio Fabregat, Steven Jupe, Lisa Matthews, Konstantinos Sidiropoulos, Marc Gillespie, Phani Garapati, Robin Haw, Bijay Jassal, Florian Korninger, Bruce May, M Orlic-Milacic, Corina Duenas Roca, Karen Rothfels, Cristoffer Sevilla, Veronica Shamovsky, Solomon I. Shorser, Thawfeek Varusai, Guilherme Viteri, Joel Weiser, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2017 被引用: 3,172
- Transcription phenotypes of pancreatic cancer are driven by genomic events during tumor evolution
著者: Michelle Chan‐Seng‐Yue, Jaeseung Kim, Gavin W. Wilson, Karen Ng, Eugenia Flores‐Figueroa, Grainne M. O’Kane, Ashton A. Connor, Robert E. Denroche, Robert C. Grant, Jessica McLeod, Julie M. Wilson, Gun Ho Jang, Amy Zhang, Anna Dodd, Sheng‐Ben Liang, Ayelet Borgida, Dianne Chadwick, Sangeetha Kalimuthu, Ilinca M. Lungu, John M.S. Bartlett, Paul M. Krzyzanowski, Vandana Sandhu, Hervé Tiriac, Fieke E. M. Froeling, Joanna M. Karasinska, James T. Topham, Daniel J. Renouf, David F. Schaeffer, Steven J.M. Jones, Marco A. Marra, Janessa Laskin, Runjan Chetty, Lincoln Stein, George Zogopoulos, Benjamin Haibe‐Kains, Peter J. Campbell, David A. Tuveson, Jennifer J. Knox, Sandra E. Fischer, Steven Gallinger, Faiyaz Notta - Nature Genetics 2020 被引用: 689
- The International Cancer Genome Consortium Data Portal
著者: Junjun Zhang, Rosita Bajari, Dusan Andric, Francois Gerthoffert, Alexandru Lepsa, Hardeep K. Nahal-Bose, Lincoln Stein, Vincent Ferretti - Nature Biotechnology 2019 被引用: 674
- Reactome pathway analysis: a high-performance in-memory approach
著者: Antonio Fabregat, Konstantinos Sidiropoulos, Guilherme Viteri, Oscar Forner, Pablo Marín-García, Vicente Arnau, Peter D’Eustachio, Lincoln Stein, Henning Hermjakob - BMC Bioinformatics, BMC Bioinform. 2017 被引用: 927
- Reactome: a database of reactions, pathways and biological processes
著者: David Croft, Gavin O'Kelly, Guanming Wu, Robin Haw, Marc Gillespie, Lisa Matthews, Michael Caudy, Phani V. Garapati, Gopal Gopinath, Bijay Jassal, Steven Jupe, Irina Kalatskaya, Shahana Mahajan, Bruce May, Nelson Ndegwa, Esther Schmidt, Veronica Shamovsky, Christina K. Yung, Ewan Birney, Henning Hermjakob, Peter D'Eustachio, Lincoln Stein - Nucleic Acids Research, Nucleic Acids Res. 2010 被引用: 1,799
- WormBase in 2022—data, processes, and tools for analyzing Caenorhabditis elegans
著者: Paul A. Davis, Magdalena Zarowiecki, Valerio Arnaboldi, Andrés Becerra, Scott Cain, Juancarlos Chan, Wen J. Chen, Jaehyoung Cho, Eduardo da Veiga Beltrame, Stavros Diamantakis, Sibyl Gao, Dionysios Grigoriadis, Christian A Grove, Todd Harris, Ranjana Kishore, Tuan Anh Le, Raymond Lee, Manuel Luypaert, Hans‐Michael Müller, Cecilia Nakamura, Paulo Nuin, Michael Paulini, Mark Quinton-Tulloch, Daniela Raciti, Faye H. Rodgers, Matthew Russell, Gary Schindelman, Archana Singh, Tim Stickland, Kimberly Van Auken, Qinghua Wang, Gary W. Williams, A. Jordan Wright, Karen Yook, Matthew Berriman, Kevin Howe, Tim Schedl, Lincoln Stein, Paul W. Sternberg - Genetics 2022 被引用: 311
- The Reactome pathway knowledgebase
著者: David Croft, Antonio Fabregat Mundo, Robin Haw, M Orlic-Milacic, Joel Weiser, Guanming Wu, Michael Caudy, Phani Garapati, Marc Gillespie, Maulik R. Kamdar, Bijay Jassal, Steven Jupe, Lisa Matthews, Bruce May, Stanislav Palatnik, Karen Rothfels, Veronica Shamovsky, Heeyeon Song, Mark Williams, Ewan Birney, Henning Hermjakob, Lincoln Stein, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2013 被引用: 1,957
- JBrowse: a dynamic web platform for genome visualization and analysis
著者: Robert Buels, Eric Yao, Colin Diesh, Richard D. Hayes, Mónica Muñoz-Torres, Gregg Helt, David Goodstein, Christine G. Elsik, Suzanna Lewis, Lincoln Stein, Ian Holmes - Genome biology 2016 被引用: 842
- A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns
著者: Faiyaz Notta, Michelle Chan‐Seng‐Yue, Mathieu Lemire, Yilong Li, Gavin W. Wilson, Ashton A. Connor, Robert E. Denroche, Sheng-Ben Liang, Andrew Brown, Jaeseung Kim, Tao Wang, Jared T. Simpson, Timothy Beck, Ayelet Borgida, Nicholas Buchner, Dianne Chadwick, Sara Hafezi‐Bakhtiari, John E. Dick, Lawrence E. Heisler, Michael A. Hollingsworth, Emin Ibrahimov, Gun Ho Jang, Jeremy Johns, Lars Jorgensen, Calvin Law, Olga Ludkovski, Ilinca M. Lungu, Karen Ng, Danielle Pasternack, Gloria M. Petersen, Liran I. Shlush, Lee E. Timms, Ming‐Sound Tsao, Julie M. Wilson, Christina K. Yung, George Zogopoulos, John M.S. Bartlett, Ludmil B. Alexandrov, Francisco X. Real, Sean P. Cleary, Michael H. A. Roehrl, John D. McPherson, Lincoln Stein, Thomas J. Hudson, Peter J. Campbell, Steven Gallinger - Nature 2016 被引用: 547
- Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE
著者: Sushmita Roy, Jason Ernst, Peter V. Kharchenko, Pouya Kheradpour, Nicolas Nègre, Matthew L. Eaton, Jane M. Landolin, Christopher A. Bristow, Lijia Ma, Michael F. Lin, Stefan Washietl, Bradley I. Arshinoff, Ferhat Ay, Patrick Meyer, Nicolas Robine, Nicole Washington, Luisa Di Stefano, Eugène Berezikov, Christopher D. Brown, Rogerio Candeias, Joseph W. Carlson, Adrian R. Carr, Irwin Jungreis, Daniel Marbach, Rachel Sealfon, Michael Tolstorukov, Sebastian Will, Artyom A. Alekseyenko, Carlo G. Artieri, Benjamin W. Booth, Angela N. Brooks, Qi Dai, Carrie Davis, Michael O. Duff, Xin Feng, Andrey A. Gorchakov, Tingting Gu, Jorja G. Henikoff, Philipp Kapranov, Renhua Li, Heather K. MacAlpine, John H. Malone, Aki Minoda, Jared T. Nordman, Katsutomo Okamura, Marc D. Perry, Sara Powell, Nicole C. Riddle, A. Sakai, Anastasia Samsonova, Jeremy E. Sandler, Yuri B. Schwartz, Noa Sher, Rebecca Spokony, David Sturgill, Marijke van Baren, Kenneth H. Wan, Li Yang, Charles Yu, Elise A. Feingold, Peter J. Good, Mark S. Guyer, Rebecca F. Lowdon, Kami Ahmad, Justen Andrews, Bonnie Berger, Steven E. Brenner, Michael R. Brent, Lucy Cherbas, Sarah C. R. Elgin, T Gingeras, Robert L. Grossman, Roger A. Hoskins, Thomas C. Kaufman, W. James Kent, Mitzi I. Kuroda, Terry L. Orr‐Weaver, Norbert Perrimon, Vincenzo Pirrotta, James W. Posakony, Bing Ren, Steven Russell, Peter Cherbas, Brenton R. Graveley, Suzanna Lewis, Gos Micklem, Brian Oliver, Peter J. Park, S Celniker, Steven Henikoff, Gary H. Karpen, Eric C. Lai, David M. MacAlpine, Lincoln Stein, Kevin P. White, Manolis Kellis, Daniel Estrada Acevedo, Richard P. Auburn, Galt P Barber, Hugo J. Bellen ほか 72 名 - Science 2010 被引用: 1,310
- WormBase 2024: status and transitioning to Alliance infrastructure
著者: Paul W. Sternberg, Kimberly Van Auken, Qinghua Wang, Adam Wright, Karen Yook, Magdalena Zarowiecki, Valerio Arnaboldi, Andrés Becerra, Stephanie Brown, Scott Cain, Juancarlos Chan, Wen J. Chen, Jaehyoung Cho, Paul A. Davis, Stavros Diamantakis, Sarah Dyer, Dionysios Grigoriadis, Christian A Grove, Todd Harris, Kevin Howe, Ranjana Kishore, Raymond Lee, Ian Longden, Manuel Luypaert, Hans‐Michael Müller, Paulo Nuin, Mark Quinton-Tulloch, Daniela Raciti, Tim Schedl, Gary Schindelman, Lincoln Stein - Genetics 2024 被引用: 275
- Childhood cerebellar tumours mirror conserved fetal transcriptional programs
著者: Maria Vladoiu, Ibrahim El-Hamamy, Laura Donovan, Hamza Farooq, Borja Holgado, Yogi Sundaravadanam, Vijay Ramaswamy, Liam D. Hendrikse, Sachin Kumar, Stephen C. Mack, John J. Y. Lee, Vernon Fong, Kyle Juraschka, David Przelicki, Antony Michealraj, Patryk Skowron, Betty Luu, Hiromichi Suzuki, A. Sorana Morrissy, Florence M.G. Cavalli, Livia Garzia, Craig Daniels, Xiaochong Wu, Maleeha Qazi, Sheila K. Singh, Jennifer A. Chan, Marco A. Marra, David Malkin, Peter B. Dirks, Lawrence E. Heisler, Trevor J. Pugh, Karen Ng, Faiyaz Notta, Eric M. Thompson, Claudia L. Kleinman, Alexandra L. Joyner, Nada Jabado, Lincoln Stein, Michael D. Taylor - Nature 2019 被引用: 448
- A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
著者: Wei Jiao, Gurnit Atwal, Paz Polak, Rosa Karlić, Edwin Cuppen, Fátima Al‐Shahrour, Gurnit Atwal, Peter J. Bailey, Andrew V. Biankin, Paul C. Boutros, Peter J. Campbell, David K. Chang, Susanna L. Cooke, Vikram Deshpande, Bishoy M. Faltas, William C. Faquin, Levi A. Garraway, Gad Getz, Sean M. Grimmond, Syed Haider, Katherine A. Hoadley, Wei Jiao, Vera B. Kaiser, Rosa Karlić, Mamoru Kato, Kirsten Kübler, Alexander J. Lazar, Constance H. Li, David N. Louis, Adam Margolin, Sancha Martin, Hardeep K. Nahal-Bose, G. Petur Nielsen, Serena Nik‐Zainal, Larsson Omberg, Christine P’ng, Marc D. Perry, Paz Polak, Esther Rheinbay, Mark A. Rubin, Colin A. Semple, Dennis C. Sgroi, Tatsuhiro Shibata, Reiner Siebert, John A. Smith, Lincoln Stein, Miranda D. Stobbe, Ren Sun, Kevin Thai, Derek Wright, Chin‐Lee Wu, Ke Yuan, Junjun Zhang, Alexandra Danyi, Jeroen de Ridder, Carla van Herpen, Martijn P. Lolkema, Neeltje Steeghs, Gad Getz, Quaid Morris, Lincoln Stein, Lauri A. Aaltonen, Federico Abascal, Adam Abeshouse, Hiroyuki Aburatani, David J. Adams, Nishant Agrawal, Keun Soo Ahn, Sung-Min Ahn, Hiroshi Aikata, Rehan Akbani, Kadir C. Akdemir, Hikmat Al‐Ahmadie, Sultan T. Al‐Sedairy, Fátima Al‐Shahrour, Malik Alawi, Monique Albert, Kenneth Aldape, Ludmil B. Alexandrov, Adrian Ally, Kathryn Alsop, Eva G. Álvarez, Fernanda Amary, Samirkumar B. Amin, Brice Aminou, Ole Ammerpohl, Matthew J. Anderson, Yeng Ang, Davide Antonello, Pavana Anur, Samuel Aparício, Elizabeth L. Appelbaum, Yasuhito Arai, Axel Aretz, Koji Arihiro, Shun‐ichi Ariizumi, Joshua Armenia, Laurent Arnould, L. Sylvia, Yassen Assenov ほか 1,285 名 - Nature Communications 2020 被引用: 238
- Distinct routes of lineage development reshape the human blood hierarchy across ontogeny
著者: Faiyaz Notta, Sasan Zandi, Naoya Takayama, Stephanie M. Dobson, Olga I. Gan, Gavin W. Wilson, Kerstin B. Kaufmann, Jessica McLeod, Elisa Laurenti, Cyrille F. Dunant, John D. McPherson, Lincoln Stein, Yigal Dror, John E. Dick - Science 2015 被引用: 762
- The NCI Genomic Data Commons
著者: Allison P. Heath, Vincent Ferretti, Stuti Agrawal, Maksim An, James C. Angelakos, Renuka Arya, Rosita Bajari, Bilal Baqar, Justin H. B. Barnowski, Jeffrey Burt, Ann Catton, Brandon F. Chan, Fay Chu, Kim Cullion, Tanja M. Davidsen, Phuong-My Do, Christian Dompierre, Martin L. Ferguson, Michael Fitzsimons, Michael E. Ford, Miyuki Fukuma, Sharon Gaheen, Gajanan Ganji, Tzintzuni I. Garcia, Sameera S. George, Daniela S. Gerhard, Francois Gerthoffert, Fauzi Gomez, Kang Han, Kyle M. Hernandez, Biju Issac, Richard F. W. Jackson, Mark A. Jensen, Sid Joshi, Ajinkya Kadam, Aishmit Khurana, Kyle M. J. Kim, Victoria E. Kraft, Shenglai Li, Tara M. Lichtenberg, Janice Lodato, Laxmi Lolla, Plamen Martinov, Jeffrey A. Mazzone, Daniel P. Miller, Ian Miller, Joshua S. Miller, Koji Miyauchi, Mark W. Murphy, Thomas Nullet, Rowland O. Ogwara, Francisco Ortuño, Jesús Pedrosa, Phuong Lan Pham, Maxim Y. Popov, James J. Porter, Ray Powell, Karl Rademacher, Colin P. Reid, Samantha Rich, Bessie Rogel, Himanso Sahni, Jeremiah Savage, Kyle A. Schmitt, Trevar Simmons, Joseph Sislow, Jonathan Spring, Lincoln Stein, S. Mažeika P. Sullivan, Yajing Tang, Mathangi Thiagarajan, Heather D. Troyer, Chang Wang, Zhining Wang, Bedford L. West, Alex Wilmer, Shane Wilson, Kaman Wu, William P. Wysocki, Linda Xiang, Joseph T. Yamada, Liming Yang, Christine Yu, Christina K. Yung, Jean C. Zenklusen, Junjun Zhang, Zhenyu Zhang, Yuanheng Zhao, Ariz Zubair, Louis M. Staudt, Robert L. Grossman - Nature Genetics 2021 被引用: 211
- The Sequence Ontology: a tool for the unification of genome annotations
著者: Karen Eilbeck, Suzanna Lewis, Chris Mungall, Mark Yandell, Lincoln Stein, Richard Durbin, Michael Ashburner - Genome biology 2005 被引用: 840
- PhyloWGS: Reconstructing subclonal composition and evolution from whole-genome sequencing of tumors
著者: Amit G. Deshwar, Shankar Vembu, Christina K. Yung, Gun Ho Jang, Lincoln Stein, Quaid Morris - Genome Biology 2015 被引用: 491
- Reactome: a knowledgebase of biological pathways
著者: G. Joshi-Tope, Marc Gillespie, Imre Vastrik, Peter D'Eustachio, Esther Schmidt, Bernard de Bono, Bijay Jassal, Gopal R. Gopinath, G. R. Wu, Lisa Matthews, Suzanna Lewis, Ewan Birney, Lincoln Stein - Nucleic Acids Research, Nucleic Acids Res. 2004 被引用: 1,316
- Spatial genomic heterogeneity within localized, multifocal prostate cancer
著者: Paul C. Boutros, Michael Fraser, Nicholas J. Harding, Richard de Borja, Dominique Trudel, Emilie Lalonde, Alice Meng, Pablo H. Hennings-Yeomans, Andrew McPherson, Veronica Y. Sabelnykova, Amin Zia, Natalie S. Fox, Julie Livingstone, Yu-Jia Shiah, Jianxin Wang, Timothy A. Beck, Cherry Have, Taryne Chong, Michelle Sam, Jeremy Johns, Lee E. Timms, Nicholas Buchner, Ada Wong, John D. Watson, Trent T Simmons, Christine P’ng, Gaetano Zafarana, Francis Nguyen, Xuemei Luo, Kenneth C. Chu, Stephenie D. Prokopec, Jenna Sykes, Alan Dal Pra, Alejandro Berlín, Andrew Brown, Michelle Chan‐Seng‐Yue, Fouad Yousif, Robert E. Denroche, Lauren C. Chong, Gregory M. Chen, Esther Jung, Clement Fung, Maud H. W. Starmans, Hanbo Chen, Shaylan K. Govind, James R. Hawley, Alister D’Costa, Melania Pintilie, Daryl Waggott, Faraz Hach, Philippe Lambin, Lakshmi Muthuswamy, Colin Cooper, Rosalind A. Eeles, David E. Neal, Bernard Têtu, Cenk Sahinalp, Lincoln Stein, Neil Fleshner, Sohrab P. Shah, Colin C. Collins, Thomas J. Hudson, John D. McPherson, Theodorus van der Kwast, Robert G. Bristow - Nature Genetics 2015 被引用: 489
- Reactome graph database: Efficient access to complex pathway data
著者: Antonio Fabregat, Florian Korninger, Guilherme Viteri, Konstantinos Sidiropoulos, Pablo Marín-García, Peipei Ping, Guanming Wu, Lincoln Stein, Peter D'Eustachio, Henning Hermjakob - PLoS Computational Biology, PLoS Comput. Biol. 2018 被引用: 289
