Paul Igor Costea

• Shinichi Sunagawa13
• Peer Bork12
• Georg Zeller10
• Luís Pedro Coelho8
• Falk Hildebrand5
• Jens Roat Kultima5
• Anita Y. Voigt4
• Jaime Huerta‐Cepas4
• Rajna Hercog4
• Daniel R. Mende3
• Matthew R. Hayward3
• Renato Alves3
• Simone S. Li3
• Thomas Schmidt3
• Vladimı́r Beneš3
• Willem M. de Vos3
• Adriana Alberti2
• Ana Zhu2
• Guillem Salazar2
• Iradj Sobhani2
• Kristoffer Forslund2
• Lucas Paoli2
• Masahira Hattori2
• Robin Munch2

1. Visualization and analysis of gene expression in tissue sections by spatial transcriptomics

   著者: Patrik L. Ståhl, Fredrik Salmén, Sanja Vicković, Anna Lundmark, José Fernández Navarro, Jens P. Magnusson, Stefania Giacomello, Michaela Asp, Jakub Orzechowski Westholm, Mikael Huss, Annelie Mollbrink, Sten Linnarsson, Simone Codeluppi, Åke Borg, Fredrik Pontén, Paul Igor Costea, Pelin Sahlén, Jan Mulder, Olaf Bergmann, Joakim Lundeberg, Jonas Frisén - Science 2016 被引用: 4,033

2. Environment dominates over host genetics in shaping human gut microbiota

   著者: Daphna Rothschild, Omer Weissbrod, Elad Barkan, Alexander Kurilshikov, Tal Korem, David Zeevi, Paul Igor Costea, Anastasia Godneva, Iris Kalka, Noam Bar, Smadar Shilo, Dar Lador, Arnau Vich Vila, Niv Zmora, Meirav Pevsner‐Fischer, David Israeli, Noa Kosower, Gal Malka, Bat Chen Wolf, Tali Avnit-Sagi, Maya Lotan‐Pompan, Adina Weinberger, Zamir Halpern, Shai Carmi, Jingyuan Fu, Cisca Wijmenga, Alexandra Zhernakova, Eran Elinav, Eran Segal - Nature 2018 被引用: 3,020

3. Salt-responsive gut commensal modulates TH17 axis and disease

   著者: Nicola Wilck, Mariana Matus, Sean M. Kearney, Scott W. Olesen, Kristoffer Forslund, Hendrik Bartolomaeus, Stefanie Haase, Anja Mähler, András Balogh, Lajos Markó, Olga Vvedenskaya, Friedrich H. Kleiner, D Tsvetkov, Lars Klug, Paul Igor Costea, Shinichi Sunagawa, Lisa Maier, Natalia Rakova, Valentin Schatz, Patrick Neubert, Christian Frätzer, Alexander Krannich, Maik Gollasch, Diana A. Grohme, Beatriz F. Côrte‐Real, Roman G. Gerlach, Marijana Basic, Athanasios Typas, Chuan Wu, Jens Titze, Jonathan Jantsch, Michael Boschmann, Ralf Dechend, Markus Kleinewietfeld, Stefan Kempa, Peer Bork, Ralf A. Linker, Eric J. Alm, Dominik N. Müller - Nature 2017 被引用: 1,316

4. Structure and function of the global ocean microbiome

   著者: Shinichi Sunagawa, Luís Pedro Coelho, Samuel Chaffron, Jens Roat Kultima, Karine Labadie, Guillem Salazar, Bardya Djahanschiri, Georg Zeller, Daniel R. Mende, Adriana Alberti, Francisco M. Cornejo‐Castillo, Paul Igor Costea, Corinne Cruaud, Francesco d’Ovidio, Stéfan Engelen, Isabel Ferrera, Josep M. Gasol, Lionel Guidi, Falk Hildebrand, Florian Kokoszka, Cyrille Lepoivre, Gipsi Lima‐Mendez, Julie Poulain, Bonnie T. Poulos, Marta Royo‐Llonch, Hugo Sarmento, Sara Vieira‐Silva, Céline Dimier, Marc Picheral, Sarah Searson, Stefanie Kandels‐Lewis, Tara Oceans coordinators, Chris Bowler, Colomban de Vargas, Gabriel Gorsky, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Jean Weissenbach, Patrick Wincker, Eric Karsenti, Jeroen Raes, Silvia G. Acinas, Peer Bork, Emmanuel Boss, Chris Bowler, Michael Follows, Lee Karp‐Boss, Uroš Kržič, Emmanuel G. Reynaud, Christian Sardet, Mike Sieracki, Didier Velayoudon - Science 2015 被引用: 3,178

5. Potential of fecal microbiota for early‐stage detection of colorectal cancer

   著者: Georg Zeller, Julien Tap, Anita Y. Voigt, Shinichi Sunagawa, Jens Roat Kultima, Paul Igor Costea, Aurélien Amiot, Jürgen Böhm, Francesco Brunetti, Nina Habermann, Rajna Hercog, Moritz Koch, Alain Luciani, Daniel R. Mende, Martin Schneider, Petra Schrotz‐King, Christophe Tournigand, Jeanne Tran Van Nhieu, Takuji Yamada, Jürgen Zimmermann, Vladimı́r Beneš, Matthias Kloor, Cornelia M. Ulrich, Magnus von Knebel Doeberitz, Iradj Sobhani, Peer Bork - Molecular Systems Biology 2014 被引用: 1,450

6. Enterotypes in the landscape of gut microbial community composition

   著者: Paul Igor Costea, Falk Hildebrand, Manimozhiyan Arumugam, Fredrik Bäckhed, Martin J. Blaser, Frederic D. Bushman, Willem M. de Vos, S. Dusko Ehrlich, Claire M. Fraser, Masahira Hattori, Curtis Huttenhower, Ian B. Jeffery, Dan Knights, James D. Lewis, Ruth E. Ley, Howard Ochman, Paul W. O’Toole, Christopher Quince, David A. Relman, Fergus Shanahan, Shinichi Sunagawa, Jun Wang, George M. Weinstock, Gary D. Wu, Georg Zeller, Liping Zhao, Jeroen Raes, Rob Knight, Peer Bork - Nature Microbiology 2017 被引用: 1,228

7. Extensive transmission of microbes along the gastrointestinal tract

   著者: Thomas Schmidt, Matthew R. Hayward, Luís Pedro Coelho, Simone S. Li, Paul Igor Costea, Anita Y. Voigt, Jakob Wirbel, Oleksandr M. Maistrenko, Renato Alves, Emma Bergsten, Carine de Beaufort, Iradj Sobhani, Anna Heintz‐Buschart, Shinichi Sunagawa, Georg Zeller, Paul Wilmes, Peer Bork - eLife 2019 被引用: 568

8. Towards standards for human fecal sample processing in metagenomic studies

   著者: Paul Igor Costea, Georg Zeller, Shinichi Sunagawa, Éric Pelletier, Adriana Alberti, Florence Levenez, Melanie Tramontano, Marja Driessen, Rajna Hercog, Ferris Jung, Jens Roat Kultima, Matthew R. Hayward, Luís Pedro Coelho, Emma Allen‐Vercoe, Laurie Bertrand, Michaël Blaut, Jillian R. Brown, Thomas Carton, Stéphanie Cools-Portier, Michelle C. Daigneault, Muriel Derrien, Anne Druesne, Willem M. de Vos, B. Brett Finlay, Harry J. Flint, Francisco Guarner, Masahira Hattori, Hans G. H. J. Heilig, Ruth Ann Luna, Johan van Hylckama Vlieg, Jana Junick, Ingeborg Klymiuk, Philippe Langella, Emmanuelle Le Chatelier, Volker Mai, Chaysavanh Manichanh, Jennifer C. Martin, Clémentine Mery, Hidetoshi Morita, Paul W. O’Toole, Céline Orvain, Kiran Raosaheb Patil, John Penders, Søren Persson, Nicolas Pons, Milena Popova, Anne Salonen, Delphine Saulnier, Karen P. Scott, Bhagirath Singh, Kathleen Slezak, Patrick Veiga, James Versalovic, Liping Zhao, Erwin G. Zoetendal, S. Dusko Ehrlich, Joël Doré, Peer Bork - Nature Biotechnology 2017 被引用: 904

9. Microbial abundance, activity and population genomic profiling with mOTUs2

   著者: Alessio Milanese, Daniel R. Mende, Lucas Paoli, Guillem Salazar, Hans‐Joachim Ruscheweyh, Miguelangel Cuenca, Pascal Hingamp, Renato Alves, Paul Igor Costea, Luís Pedro Coelho, Thomas Schmidt, Alexandre Almeida, Alex Mitchell, ROBERT FINN, Jaime Huerta‐Cepas, Peer Bork, Georg Zeller, Shinichi Sunagawa - Nature Communications 2019 被引用: 495

10. Selective maternal seeding and environment shape the human gut microbiome

    著者: Katri Korpela, Paul Igor Costea, Luís Pedro Coelho, Stefanie Kandels‐Lewis, Gonneke Willemsen, Dorret I. Boomsma, Nicola Segata, Peer Bork - Genome Research 2018 被引用: 368

11. Similarity of the dog and human gut microbiomes in gene content and response to diet

    著者: Luís Pedro Coelho, Jens Roat Kultima, Paul Igor Costea, Coralie Fournier, Yuanlong Pan, Gail L. Czarnecki-Maulden, Matthew R. Hayward, Sofia K. Forslund, Thomas Schmidt, Patrick Descombes, Janet R Jackson, Qinghong Li, Peer Bork - Microbiome 2018 被引用: 383

12. Durable coexistence of donor and recipient strains after fecal microbiota transplantation

    著者: Simone S. Li, Ana Zhu, Vladimı́r Beneš, Paul Igor Costea, Rajna Hercog, Falk Hildebrand, Jaime Huerta‐Cepas, Max Nieuwdorp, Jarkko Salojärvi, Anita Y. Voigt, Georg Zeller, Shinichi Sunagawa, Willem M. de Vos, Peer Bork - Science 2016 被引用: 578

13. Subspecies in the global human gut microbiome

    著者: Paul Igor Costea, Luís Pedro Coelho, Shinichi Sunagawa, Robin Munch, Jaime Huerta‐Cepas, Kristoffer Forslund, Falk Hildebrand, Аlmagul Kushugulova, Georg Zeller, Peer Bork - Molecular Systems Biology 2017 被引用: 169

14. Temporal and technical variability of human gut metagenomes

    著者: Anita Y. Voigt, Paul Igor Costea, Jens Roat Kultima, Simone S. Li, Georg Zeller, Shinichi Sunagawa, Peer Bork - Genome Biology 2015 被引用: 205

15. Antibiotics-induced monodominance of a novel gut bacterial order

    著者: Falk Hildebrand, Lucas Moitinho‐Silva, Sonja Blasche, Martin T. Jahn, Toni I. Gossmann, Jaime Huerta‐Cepas, Rajna Hercog, Mechthild Lϋetge, Mohammad Bahram, Anna Pryszlak, Renato Alves, Sebastian M. Waszak, Ana Zhu, Lumeng Ye, Paul Igor Costea, Steven Aalvink, Clara Belzer, Sofia K. Forslund, Shinichi Sunagawa, Ute Hentschel, Christoph A. Merten, Kiran Raosaheb Patil, Vladimı́r Beneš, Peer Bork - Gut 2019 被引用: 86

16. A fair comparison

    著者: Paul Igor Costea, Georg Zeller, Shinichi Sunagawa, Peer Bork - Nature Methods 2014 被引用: 114

17. metaSNV: A tool for metagenomic strain level analysis

    著者: Paul Igor Costea, Robin Munch, Luís Pedro Coelho, Lucas Paoli, Shinichi Sunagawa, Peer Bork - PLoS ONE 2017 被引用: 119

18. TRPV channel nanchung and TRPA channel water witch form insecticide-activated complexes

    著者: Ramani A. Kandasamy, Paul Igor Costea, Lynn Stam, Alexandre Nesterov - Insect Biochemistry and Molecular Biology 2022 被引用: 25

19. Automation-aided construction and characterization of Bacillus subtilis PrsA strains for the secretion of amylases

    著者: Felix Hamburger, Niels Schlichting, Michael Eichenlaub, Paul Igor Costea, Christopher Sauer, Stefan Jenewein, Johannes Kabisch - Frontiers in Bioengineering and Biotechnology 2025 被引用: 5

全 19 件を表示しました。