Stephen D. Bentley
2000–2025 年に発表
- 別表記
- Stephen D Bentley
- 198
- 論文数
- 42,361
- 被引用数
- 102
- h 指数
- 184
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Medicine41%
- Biochemistry, Genetics and Molecular Biology34.2%
- Agricultural and Biological Sciences10.8%
- Immunology and Microbiology7.7%
- Environmental Science3.8%
- Chemistry0.4%
- その他2.1%
トピック
- Genomics and Phylogenetic Studies6.3%
- Antimicrobial Resistance in Staphylococcus4.9%
- Antibiotic Resistance in Bacteria4.9%
- Pneumonia and Respiratory Infections3.9%
- Bacterial biofilms and quorum sensing3.2%
- Bacteriophages and microbial interactions3.1%
- その他73.7%
共著者
- Julian Parkhill81
- Nicholas J. Croucher46
- Matthew T. G. Holden35
- Rebecca A. Gladstone34
- Simon R. Harris34
- Stephanie W. Lo34
- Jukka Corander31
- Michael A. Quail31
- Lesley McGee26
- John A. Lees21
- Paul Turner21
- William P. Hanage20
- Gerry Tonkin‐Hill19
- Brenda Kwambana-Adams17
- Robert F. Breiman17
- Chrispin Chaguza16
- Paulina A. Hawkins16
- Keith P. Klugman15
- Andries J. van Tonder13
- Bernard Beall13
- Martín Antonio13
- Claire Chewapreecha12
- Nicholas R. Thomson12
- Anne von Gottberg11
全論文
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
著者: Nicholas J. Croucher, Andrew J. Page, Thomas R. Connor, Aidan Delaney, Jacqueline A. Keane, Stephen D. Bentley, Julian Parkhill, Simon R. Harris - Nucleic Acids Research 2014 被引用: 2,884
- Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
著者: Stephen D. Bentley, Keith Chater, Ana Cerdeño-Tárraga, Gregory L. Challis, Nicholas R. Thomson, Keith James, David Harris, Michael A. Quail, Helen M. Kieser, D. Harper, Alex Bateman, Susan J. Brown, Govind Chandra, C. W. Chen, Matthew Collins, Ann Cronin, Audrey Fraser, Arlette Goble, Jorge Hidalgo, T. Hornsby, Sue Howarth, Chen‐Hua Huang, Tobias Kieser, L. Larke, Lee Murphy, Karen Oliver, Shawn T. O’Neil, Ester Rabbinowitsch, M.-A. Rajandream, Kim Rutherford, Simon Rutter, Kathy Seeger, David Saunders, Sarah Sharp, Rob Squares, S. Squares, K. Taylor, Tim Warren, Andreas Wietzorrek, John R. Woodward, B. G. Barrell, Julian Parkhill, David A. Hopwood - Nature 2002 被引用: 3,288
- Fast and flexible bacterial genomic epidemiology with PopPUNK
著者: John A. Lees, Simon R. Harris, Gerry Tonkin‐Hill, Rebecca A. Gladstone, Stephanie W. Lo, Jeffrey N. Weiser, Jukka Corander, Stephen D. Bentley, Nicholas J. Croucher - Genome Research 2019 被引用: 505
- A New Pneumococcal Capsule Type, 10D, is the 100th Serotype and Has a Large cps Fragment from an Oral Streptococcus
著者: Feroze Ganaie, Jamil S. Saad, Lesley McGee, Andries J. van Tonder, Stephen D. Bentley, Stephanie W. Lo, Rebecca A. Gladstone, Paul Turner, Jeremy D. Keenan, Robert F. Breiman, Moon H. Nahm - mBio 2020 被引用: 415
- Fast hierarchical Bayesian analysis of population structure
著者: Gerry Tonkin‐Hill, John A. Lees, Stephen D. Bentley, Simon D. W. Frost, Jukka Corander - Nucleic Acids Research 2019 被引用: 373
- Bayesian inference of ancestral dates on bacterial phylogenetic trees
著者: Xavier Didelot, Nicholas J. Croucher, Stephen D. Bentley, Simon R. Harris, Daniel J. Wilson - Nucleic Acids Research 2018 被引用: 342
- RhierBAPS: An R implementation of the population clustering algorithm hierBAPS
著者: Gerry Tonkin‐Hill, John A. Lees, Stephen D. Bentley, Simon D. W. Frost, Jukka Corander - Wellcome Open Research 2018 被引用: 332
- Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study
著者: Stephanie W. Lo, Rebecca A. Gladstone, Andries J. van Tonder, John A. Lees, Mignon du Plessis, Rachel Benisty, Noga Givon‐Lavi, Paulina A. Hawkins, Jennifer Cornick, Brenda Kwambana-Adams, Pierra Y. Law, Pak‐Leung Ho, Martín Antonio, Dean Everett, Ron Dagan, Anne von Gottberg, Keith P. Klugman, Lesley McGee, Robert F. Breiman, Stephen D. Bentley, Abdullah Brooks, Alejandra Corso, Alexander Davydov, Alison J. Maguire, Andrew J. Pollard, Anmol Kiran, Anna Skoczyńska, Benild Moiane, Bernard Beall, Betuel Sigaúque, David M. Aanensen, Deborah Lehmann, Diego Faccone, Ebenezer Foster-Nyarko, Ebrima Bojang, Egorova Ea, Е. А. Воропаева, Eric Sampane-Donkor, Ewa Sadowy, Godfrey Bigogo, Hélio Mucavele, Houria Belabbès, Idrissa Diawara, Jennifer C. Moïsi, Jennifer R. Verani, Jeremy D. Keenan, Jyothish Bhai, Kedibone Ndlangisa, Khalid Zerouali, K L Ravikumar, Leonid Titov, Linda de Gouveia, Maaike Alaerts, Margaret Ip, Maria Cristina de Cunto Brandileone, Md Hasanuzzaman, Metka Paragi, Michele Nurse-Lucas, Mushal Ali, Naima Elmdaghri, Nicholas J. Croucher, Nicole Wolter, Nurit Porat, Özgen Köseoğlu Eser, Patrick Eberechi Akpaka, Paul Turner, Paula Gagetti, Peggy-Estelle Tientcheu, Philip E. Carter, Rafal Mostowy, Rama Kandasamy, Rebecca Ford, Rebecca Henderson, Roly Malaker, Sadia Shakoor, Samanta Cristine Grassi Almeida, Samir K. Saha, Sanjay Doiphode, Shabir A. Madhi, Shamala Devi Sekaran, Somporn Srifuengfung, Stephen Obaro, Stuart C. Clarke, Susan Nzenze, Tamara Kastrin, Theresa J. Ochoa, Balaji Veeraraghavan, Waleria Hryniewicz, Yulia Urban - The Lancet Infectious Diseases 2019 被引用: 288
- Meticillin-resistant Staphylococcus aureus with a novel mecA homologue in human and bovine populations in the UK and Denmark: a descriptive study
著者: Laura García-Álvarez, Matthew T. G. Holden, Heather Lindsay, Cerian Ruth Webb, Derek F. J. Brown, Martin D. Curran, Enid Walpole, Karen Brooks, Derek Pickard, Christopher Teale, Julian Parkhill, Stephen D. Bentley, Giles Edwards, E. K. Girvan, Angela Kearns, Bruno Pichon, Robert L. Hill, Anders Rhod Larsen, Robert Skov, Sharon J. Peacock, Duncan J. Maskell, Mark A. Holmes - The Lancet Infectious Diseases 2011 被引用: 924
- International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact
著者: Rebecca A. Gladstone, Stephanie W. Lo, John A. Lees, Nicholas J. Croucher, Andries J. van Tonder, Jukka Corander, Andrew J. Page, Pekka Marttinen, Leon J. Bentley, Theresa J. Ochoa, Pak‐Leung Ho, Mignon du Plessis, Jennifer Cornick, Brenda Kwambana-Adams, Rachel Benisty, Susan Nzenze, Shabir A. Madhi, Paulina A. Hawkins, Dean Everett, Martín Antonio, Ron Dagan, Keith P. Klugman, Anne von Gottberg, Lesley McGee, Robert F. Breiman, Stephen D. Bentley - EBioMedicine 2019 被引用: 274
- Atlas of group A streptococcal vaccine candidates compiled using large-scale comparative genomics
著者: Mark R. Davies, Liam McIntyre, Ankur Mutreja, Jake A. Lacey, John A. Lees, Rebecca J. Towers, Sebastián Duchêne, Pierre R. Smeesters, Hannah R. Frost, David J. Price, Matthew T. G. Holden, Sophia David, Philip M. Giffard, Kate A. Worthing, Anna C. Seale, James A. Berkley, Simon R. Harris, Tania Rivera-Hernández, Olga Berking, Amanda J. Cork, Rosângela S. L. A. Torres, Trevor Lithgow, Richard A. Strugnell, René Bergmann, Patric Nitsche-Schmitz, G. S. Chhatwal, Stephen D. Bentley, John D. Fraser, Nicole J. Moreland, Jonathan R. Carapetis, Andrew C. Steer, Julian Parkhill, Allan Saul, Deborah A. Williamson, Bart J. Currie, Steven Y. C. Tong, Gordon Dougan, Mark J. Walker - Nature Genetics 2019 被引用: 211
- Methicillin-resistant Staphylococcus aureus emerged long before the introduction of methicillin into clinical practice
著者: Catriona P. Harkins, Bruno Pichon, Michel Doumith, Julian Parkhill, Henrik Westh, Alexander Tomasz, Hermı́nia de Lencastre, Stephen D. Bentley, Angela Kearns, Matthew T. G. Holden - Genome biology 2017 被引用: 324
- Genetic Analysis of the Capsular Biosynthetic Locus from All 90 Pneumococcal Serotypes
著者: Stephen D. Bentley, David M. Aanensen, Angeliki Mavroidi, David Saunders, Ester Rabbinowitsch, Matthew Collins, Kathy Donohoe, D. James Harris, Lee Murphy, Michael A. Quail, Gabby Samuel, Ian C. Skovsted, Margit S. Kaltoft, Bart Barrell, Peter R. Reeves, Julian Parkhill, Brian G. Spratt - PLoS Genetics 2006 被引用: 772
- Evolution of MRSA During Hospital Transmission and Intercontinental Spread
著者: Simon R. Harris, Edward J. Feil, Matthew T. G. Holden, Michael A. Quail, Emma K. Nickerson, Narisara Chantratita, Susana Gardete, Ana Tavares, Nick Day, Jodi A. Lindsay, Jonathan D. Edgeworth, Hermı́nia de Lencastre, Julian Parkhill, Sharon J. Peacock, Stephen D. Bentley - Science 2010 被引用: 1,123
- Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18
著者: Julian Parkhill, Gordon Dougan, Keith James, Nicholas R. Thomson, Derek Pickard, John Wain, Carol Churcher, Karen Mungall, Stephen D. Bentley, Matthew T. G. Holden, Mohammed Sebaihia, Stephen Baker, D. Basham, Karen Brooks, Tracey Chillingworth, Phillippa L. Connerton, Ann Cronin, Paul A. Davis, Robert M. Davies, Linda Dowd, Nicholas J. White, Jeremy Farrar, Theresa Feltwell, N. Hamlin, Ashraful Haque, Tran Tinh Hien, S. Holroyd, Kay Jagels, Anders Krogh, T. S. Larsen, S. Leather, Sharon Moule, Peadar Ó Gaora, Chris M. Parry, Michael A. Quail, Kim Rutherford, Mark Simmonds, Jason Skelton, Kim Stevens, Sally Whitehead, B. G. Barrell - Nature 2001 被引用: 1,298
- Rapid Pneumococcal Evolution in Response to Clinical Interventions
著者: Nicholas J. Croucher, Simon R. Harris, Christophe Fraser, Michael A. Quail, John H. Burton, Mark van der Linden, Lesley McGee, Anne von Gottberg, Jae Hoon Song, Kwan Soo Ko, Bruno Pichon, Stephen Baker, Christopher M. Parry, Lotte Lambertsen, Dea Shahinas, Dylan R. Pillai, Timothy J. Mitchell, Gordon Dougan, Alexander Tomasz, Keith P. Klugman, Julian Parkhill, William P. Hanage, Stephen D. Bentley - Science 2011 被引用: 921
- Emergence of a multidrug-resistant and virulent Streptococcus pneumoniae lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study
著者: Stephanie W. Lo, Kate C. Mellor, Robert Cohen, Alba Redin Alonso, Sophie Belman, Narender Kumar, Paulina A. Hawkins, Rebecca A. Gladstone, Anne von Gottberg, Balaji Veeraraghavan, K L Ravikumar, Rama Kandasamy, Sir Andrew J Pollard, Samir K. Saha, Godfrey Bigogo, Martín Antonio, Brenda Kwambana-Adams, Shaper Mirza, Sadia Shakoor, Muhammad Imran Nisar, Jennifer Cornick, Deborah Lehmann, Rebecca Ford, Betuel Sigaúque, Paul Turner, Jennifer C. Moïsi, Stephen Obaro, Ron Dagan, Idrissa Diawara, Anna Skoczyńska, Hui Wang, Philip E. Carter, Keith P. Klugman, Gail L. Rodgers, Robert F. Breiman, Lesley McGee, Stephen D. Bentley, Carmen Muñoz‐Almagro, Emmanuelle Varon, Abdullah Brooks, Alejandra Corso, Alexander Davydov, Alison Maguire, Anmol Kiran, Benild Moiane, Bernard Beall, Chunjiang Zhao, David Aanensen, Dean Everett, Diego Faccone, Ebenezer Foster-Nyarko, Ebrima Bojang, Ekaterina Egorova, Elena Voropaeva, Eric Sampane-Donkor, Ewa Sadowy, Geetha Nagaraj, Helio Mucavele, Houria Belabbès, Naima Elmdaghri, Jennifer Verani, Jeremy Keenan, John Lees, Jyothish N Nair Thulasee Bhai, Kedibone Ndlangisa, Khalid Zerouali, Leon Bentley, Leonid Titov, Linda De Gouveia, Maaike Alaerts, Margaret Ip, Maria Cristina de Cunto Brandileone, Md Hasanuzzaman, Metka Paragi, Michele Nurse-Lucas, Mignon du Plessis, Mushal Ali, Nicholas Croucher, Nicole Wolter, Noga Givon-Lavi, Nurit Porat, Özgen Köseoglu Eser, Pak-Leung Ho, Patrick Eberechi Akpaka, Paula Gagetti, Peggy-Estelle Tientcheu, Pierra Law, Rachel Benisty, Rafal Mostowy, Roly Malaker, Samanta Cristine Grassi Almeida, Sanjay Doiphode, Shabir Madhi, Shamala Devi Sekaran, Stuart Clarke, Somporn Srifuengfung, Susan Nzenze, Tamara Kastrin, Theresa Ochoa, Waleria Hryniewicz ほか 1 名 - The Lancet Microbe 2022 被引用: 102
- Emergence and dissemination of antimicrobial resistance in Escherichia coli causing bloodstream infections in Norway in 2002–17: a nationwide, longitudinal, microbial population genomic study
著者: Rebecca A. Gladstone, Alan McNally, Anna K. Pöntinen, Gerry Tonkin‐Hill, John A. Lees, Kusti Skytén, François Cléon, Martín Christensen, Bjørg Haldorsen, Kristina K. Bye, Karianne Wiger Gammelsrud, Reidar Hjetland, Angela Kümmel, Hege E. Larsen, Paul Christoffer Lindemann, Iren H. Löhr, Åshild Marvik, Einar Nilsen, Marie T. Noer, Gunnar Skov Simonsen, Martin Steinbakk, Ståle Tofteland, Marit Vattøy, Stephen D. Bentley, Nicholas J. Croucher, Julian Parkhill, Pål J. Johnsen, Ørjan Samuelsen, Jukka Corander - The Lancet Microbe 2021 被引用: 99
- Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
著者: Julian Parkhill, Mohammed Sebaihia, Andrew Preston, Lee Murphy, Nicholas R. Thomson, David Harris, Matthew T. G. Holden, Carol Churcher, Stephen D. Bentley, Karen Mungall, Ana Cerdeño-Tárraga, Louise Temple, Keith James, Barbara Harris, Michael A. Quail, Mark Achtman, Rebecca Atkin, Stephen Baker, D. Basham, Nathalie Bason, Inna Cherevach, Tracey Chillingworth, Matthew Collins, Anne Cronin, Paul A. Davis, J. Doggett, Theresa Feltwell, Arlette Goble, N. Hamlin, Heidi Hauser, S. Holroyd, Kay Jagels, S. Leather, Sharon Moule, Halina Norberczak, Susan O’Neil, Doug Ormond, Claire Price, Ester Rabbinowitsch, Simon Rutter, Mandy Sanders, David Saunders, Katherine Seeger, Sarah Sharp, Mark Simmonds, Jason Skelton, Robert Squares, Steven Squares, Kim Stevens, Louise Unwin, Sally Whitehead, Bart Barrell, Duncan J. Maskell - Nature Genetics 2003 被引用: 1,043
- Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study
著者: Simon R. Harris, Edward J. P. Cartwright, M. Estée Török, Matthew T. G. Holden, Nicholas M Brown, Amanda Ogilvy‐Stuart, Matthew J. Ellington, Michael A. Quail, Stephen D. Bentley, Julian Parkhill, Sharon J. Peacock - The Lancet Infectious Diseases 2012 被引用: 591
- Dense genomic sampling identifies highways of pneumococcal recombination
著者: Claire Chewapreecha, Simon R. Harris, Nicholas J. Croucher, Claudia Turner, Pekka Marttinen, Lu Cheng, Alberto Pessia, David M. Aanensen, Alison E. Mather, Andrew J. Page, Susannah J. Salter, David Harris, François Nosten, David Goldblatt, Jukka Corander, Julian Parkhill, Paul Turner, Stephen D. Bentley - Nature Genetics 2014 被引用: 410
- Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak
著者: Claudio U. Köser, Matthew T. G. Holden, Matthew J. Ellington, Edward J. P. Cartwright, Nicholas M. Brown, Amanda Ogilvy‐Stuart, Li Yang Hsu, Claire Chewapreecha, Nicholas J. Croucher, Simon R. Harris, Mandy Sanders, Mark C. Enright, Gordon Dougan, Stephen D. Bentley, Julian Parkhill, Louise Fraser, Jason Betley, Ole Schulz-Trieglaff, Geoff Smith, Sharon J. Peacock - New England Journal of Medicine 2012 被引用: 667
- The complete genome, comparative and functional analysis of Stenotrophomonas maltophiliareveals an organism heavily shielded by drug resistance determinants
著者: Lisa Crossman, Virginia C. Gould, J. Maxwell Dow, Georgios S Vernikos, Aki Okazaki, Mohammed Sebaihia, David Saunders, C. Arrowsmith, Tim Carver, Nicholas Peters, Ellen Adlem, Arnaud Kerhornou, Angela Lord, Lee Murphy, Katharine Seeger, Robert Squares, Simon Rutter, Michael A. Quail, Mari-Adele Rajandream, David J. Harris, Carol Churcher, Stephen D. Bentley, Julian Parkhill, Nicholas R. Thomson, Matthew B. Avison - Genome biology 2008 被引用: 560
- Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci
著者: Taj Azarian, Patrick K. Mitchell, Maria Georgieva, Claudette M. Thompson, Amel Ghouila, Andrew J. Pollard, Anne von Gottberg, Mignon du Plessis, Martín Antonio, Brenda Kwambana-Adams, Stuart C. Clarke, Dean Everett, Jennifer Cornick, Ewa Sadowy, Waleria Hryniewicz, Anna Skoczyńska, Jennifer C. Moïsi, Lesley McGee, Bernard Beall, Benjamin J. Metcalf, Robert F. Breiman, Pak‐Leung Ho, Raymond Reid, Katherine L. O’Brien, Rebecca A. Gladstone, Stephen D. Bentley, William P. Hanage - PLoS Pathogens 2018 被引用: 109
