Tommi Vatanen
2010–2025 年に発表
- 64
- 論文数
- 18,100
- 被引用数
- 40
- h 指数
- 57
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology61.5%
- Medicine19.3%
- Nursing4.1%
- Environmental Science3.4%
- Agricultural and Biological Sciences2.7%
- Immunology and Microbiology2.4%
- その他6.6%
トピック
- Gut microbiota and health23.4%
- Clostridium difficile and Clostridium perfringens research6.5%
- Diet and metabolism studies4.5%
- Probiotics and Fermented Foods3.5%
- Gastrointestinal motility and disorders2.7%
- Inflammatory Bowel Disease2.5%
- その他56.9%
共著者
- Ramnik J. Xavier25
- Justin M. O’Sullivan15
- Hera Vlamakis13
- Curtis Huttenhower12
- Mikael Knip12
- Wayne S. Cutfield11
- Brooke C. Wilson10
- Dirk Gevers8
- Eric A. Franzosa8
- José G. B. Derraik8
- Valentina Chiavaroli7
- Benjamin B. Albert6
- Harri Lähdesmäki6
- Heli Siljander6
- Karen S. W. Leong6
- Kathryn L. Beck6
- Tapani Raiko6
- Thilini N. Jayasinghe6
- William Schierding6
- A. Brantley Hall5
- Alexandra Zhernakova5
- Cathryn A. Conlon5
- Clary B. Clish5
- Damian R. Plichta5
全論文
- Gut microbiome structure and metabolic activity in inflammatory bowel disease
著者: Eric A. Franzosa, Alexandra Sirota‐Madi, Julián Ávila-Pacheco, Nadine Fornelos, Henry J. Haiser, Stefan Reinker, Tommi Vatanen, A. Brantley Hall, Himel Mallick, Lauren J. McIver, Jenny Sauk, Robin Wilson, Betsy W. Stevens, Justin Scott, Kerry A. Pierce, Amy Deik, Kevin Bullock, Floris Imhann, Jeffrey A. Porter, Alexandra Zhernakova, Jingyuan Fu, Rinse K. Weersma, Cisca Wijmenga, Clary B. Clish, Hera Vlamakis, Curtis Huttenhower, Ramnik J. Xavier - Nature Microbiology 2018 被引用: 2,011
- Temporal development of the gut microbiome in early childhood from the TEDDY study
著者: Christopher J. Stewart, Nadim J. Ajami, Jacqueline O’Brien, Diane S. Hutchinson, Daniel P. Smith, Matthew C. Wong, Matthew C. Ross, Richard E. Lloyd, HarshaVardhan Doddapaneni, Ginger Metcalf, Donna M. Muzny, Richard A. Gibbs, Tommi Vatanen, Curtis Huttenhower, Ramnik J. Xavier, Marian Rewers, William Hagopian, Jorma Toppari, Anette‐G. Ziegler, Jin‐Xiong She, Beena Akolkar, Åke Lernmark, Heikki Hyöty, Kendra Vehik, Jeffrey P. Krischer, Joseph F. Petrosino - Nature 2018 被引用: 2,116
- Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity
著者: Alexandra Zhernakova, Alexander Kurilshikov, Marc Jan Bonder, Ettje F. Tigchelaar, Melanie Schirmer, Tommi Vatanen, Zlatan Mujagic, Arnau Vich Vila, Gwen Falony, Sara Vieira‐Silva, Jun Wang, Floris Imhann, Eelke Brandsma, Soesma A. Jankipersadsing, Marie Joossens, María Carmen Cénit, Patrick Deelen, Morris A. Swertz, LifeLines cohort study, Rinse K. Weersma, Edith J. M. Feskens, Mihai G. Netea, Dirk Gevers, Daisy Jonkers, Lude Franke, Yurii S. Aulchenko, Curtis Huttenhower, Jeroen Raes, Marten H. Hofker, Ramnik J. Xavier, Cisca Wijmenga, Jingyuan Fu - Science 2016 被引用: 1,996
- A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients
著者: A. Brantley Hall, Moran Yassour, Jenny Sauk, Ashley Garner, Xiaofang Jiang, Timothy D. Arthur, Georgia Lagoudas, Tommi Vatanen, Nadine Fornelos, Robin Wilson, Madeline Bertha, Melissa Cohen, John J. Garber, Hamed Khalili, Dirk Gevers, Ashwin N. Ananthakrishnan, Subra Kugathasan, Eric S. Lander, Paul C. Blainey, Hera Vlamakis, Ramnik J. Xavier, Curtis Huttenhower - Genome Medicine 2017 被引用: 783
- Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans
著者: Tommi Vatanen, Aleksandar D. Kostic, Eva d’Hennezel, Heli Siljander, Eric A. Franzosa, Moran Yassour, Raivo Kolde, Hera Vlamakis, Timothy D. Arthur, Anu-Maaria Hämäläinen, Aleksandr Peet, Vallo Tillmann, Raivo Uibo, Sergei Mokurov, Н В Доршакова, Jorma Ilonen, Suvi Μ. Virtanen, Susanne J. Szabo, Jeffrey A. Porter, Harri Lähdesmäki, Curtis Huttenhower, Dirk Gevers, Thomas W. Cullen, Mikael Knip, Ramnik J. Xavier - Cell 2016 被引用: 1,326
- Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability
著者: Moran Yassour, Tommi Vatanen, Heli Siljander, Anu‐Maaria Hämäläinen, Taina Härkönen, Samppa Ryhänen, Eric A. Franzosa, Hera Vlamakis, Curtis Huttenhower, Dirk Gevers, Eric S. Lander, Mikael Knip, on behalf of the DIABIMMUNE Study Group, Ramnik J. Xavier - Science Translational Medicine 2016 被引用: 1,068
- The human gut microbiome in early-onset type 1 diabetes from the TEDDY study
著者: Tommi Vatanen, Eric A. Franzosa, Randall Schwager, Surya Tripathi, Timothy D. Arthur, Kendra Vehik, Åke Lernmark, William Hagopian, Marian Rewers, Jin‐Xiong She, Jorma Toppari, Anette‐G. Ziegler, Beena Akolkar, Jeffrey P. Krischer, Christopher J. Stewart, Nadim J. Ajami, Joseph F. Petrosino, Dirk Gevers, Harri Lähdesmäki, Hera Vlamakis, Curtis Huttenhower, Ramnik J. Xavier - Nature 2018 被引用: 919
- The Dynamics of the Human Infant Gut Microbiome in Development and in Progression toward Type 1 Diabetes
著者: Aleksandar D. Kostic, Dirk Gevers, Heli Siljander, Tommi Vatanen, Tuulia Hyötyläinen, Anu‐Maaria Hämäläinen, Aleksandr Peet, Vallo Tillmann, Päivi Pöhö, Ismo Mattila, Harri Lähdesmäki, Eric A. Franzosa, Outi Vaarala, Marcus C. de Goffau, Hermie J. M. Harmsen, Jorma Ilonen, Suvi Μ. Virtanen, Clary B. Clish, Matej Orešič, Curtis Huttenhower, Mikael Knip, Ramnik J. Xavier - Cell Host & Microbe 2015 被引用: 1,207
- Elevated rates of horizontal gene transfer in the industrialized human microbiome
著者: Mathieu Groussin, Mathilde Poyet, Ainara Sistiaga, Sean M. Kearney, Katya Moniz, Mary Noel, Jeff Hooker, Sean M. Gibbons, Laure Ségurel, Alain Froment, Rihlat Saïd-Mohamed, Alain Fezeu, Vanessa A. Juimo, Sophie Lafosse, Francis Ekwin Tabe, Catherine Girard, Deborah Iqaluk, Le Thanh Tu Nguyen, B. Jesse Shapiro, Jenni Lehtimäki, Lasse Ruokolainen, Pinja Kettunen, Tommi Vatanen, Shani Sigwazi, Audax Mabulla, Manuel Domínguez‐Rodrigo, Yvonne Ayerki Nartey, Adwoa Agyei‐Nkansah, Amoako Duah, Yaw Asante Awuku, Kenneth Valles, Shadrack Osei Asibey, Mary Afihene, Lewis R. Roberts, Amelie Plymoth, Charles Onyekwere, Roger E. Summons, Ramnik J. Xavier, Eric J. Alm - Cell 2021 被引用: 369
- The effect of host genetics on the gut microbiome
著者: Marc Jan Bonder, Alexander Kurilshikov, Ettje F. Tigchelaar, Zlatan Mujagic, Floris Imhann, Arnau Vich Vila, Patrick Deelen, Tommi Vatanen, Melanie Schirmer, Sanne P. Smeekens, Daria V. Zhernakova, Soesma A. Jankipersadsing, Martin Jaeger, Marije Oosting, María Carmen Cénit, Ad Masclee, Morris A. Swertz, Yang Li, Vinod Kumar, Leo A. B. Joosten, Hermie J. M. Harmsen, Rinse K. Weersma, Lude Franke, Marten H. Hofker, Ramnik J. Xavier, Daisy Jonkers, Mihai G. Netea, Cisca Wijmenga, Jingyuan Fu, Alexandra Zhernakova - Nature Genetics 2016 被引用: 868
- Mobile genetic elements from the maternal microbiome shape infant gut microbial assembly and metabolism
著者: Tommi Vatanen, Karolina S. Jabbar, Terhi Ruohtula, Jarno Honkanen, Julián Ávila-Pacheco, Heli Siljander, Martin Stražar, Sami Oikarinen, Heikki Hyöty, Jorma Ilonen, Caroline M. Mitchell, Moran Yassour, Suvi Μ. Virtanen, Clary B. Clish, Damian R. Plichta, Hera Vlamakis, Mikael Knip, Ramnik J. Xavier - Cell 2022 被引用: 180
- The Super-Donor Phenomenon in Fecal Microbiota Transplantation
著者: Brooke C. Wilson, Tommi Vatanen, Wayne S. Cutfield, Justin M. O’Sullivan - Frontiers in Cellular and Infection Microbiology 2019 被引用: 414
- Strain-specific impacts of probiotics are a significant driver of gut microbiome development in very preterm infants
著者: Lauren C. Beck, A Masi, Gregory R. Young, Tommi Vatanen, Christopher A Lamb, Rachel Smith, Jonathan Coxhead, Alana Butler, Benjamin J. Marsland, Nicholas D. Embleton, Janet Berrington, Christopher J. Stewart - Nature Microbiology 2022 被引用: 165
- Effects of Fecal Microbiome Transfer in Adolescents With Obesity
著者: Karen S. W. Leong, Thilini N. Jayasinghe, Brooke C. Wilson, José G. B. Derraik, Benjamin B. Albert, Valentina Chiavaroli, Darren Svirskis, Kathryn L. Beck, Cathryn A. Conlon, Yannan Jiang, William Schierding, Tommi Vatanen, David J. Holland, Justin M. O’Sullivan, Wayne S. Cutfield - JAMA Network Open 2020 被引用: 171
- Centenarians have a diverse gut virome with the potential to modulate metabolism and promote healthy lifespan
著者: Joachim Johansen, Koji Atarashi, Yasumichi Arai, Nobuyoshi Hirose, Søren J. Sørensen, Tommi Vatanen, Mikael Knip, Kenya Honda, Ramnik J. Xavier, Simon Rasmussen, Damian R. Plichta - Nature Microbiology 2023 被引用: 104
- Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life
著者: Tommi Vatanen, Damian R. Plichta, Juhi Somani, Philipp C. Münch, Timothy D. Arthur, A. Brantley Hall, Sabine Rudolf, Edward J. Oakeley, Xiaobo Ke, Rachel Young, Henry J. Haiser, Raivo Kolde, Moran Yassour, Kristiina Luopajärvi, Heli Siljander, Suvi Μ. Virtanen, Jorma Ilonen, Raivo Uibo, Vallo Tillmann, Sergei Mokurov, Н В Доршакова, Jeffrey A. Porter, Alice C. McHardy, Harri Lähdesmäki, Hera Vlamakis, Curtis Huttenhower, Mikael Knip, Ramnik J. Xavier - Nature Microbiology 2018 被引用: 246
- A distinct clade of Bifidobacterium longum in the gut of Bangladeshi children thrives during weaning
著者: Tommi Vatanen, Qi Yan Ang, Léa Siegwald, Shafiqul Alam Sarker, Caroline I. Le Roy, Stéphane Duboux, Omar Delannoy-Bruno, Catherine Ngom‐Bru, Claire L. Boulangé, Martin Stražar, Julián Ávila-Pacheco, Amy Deik, Kerry A. Pierce, Kevin Bullock, Courtney Dennis, Shamima Sultana, Sharika Sayed, Mahbubar Rahman, Tahmeed Ahmed, Monica Modesto, Paola Mattarelli, Clary B. Clish, Hera Vlamakis, Damian R. Plichta, Olga Sakwińska, Ramnik J. Xavier - Cell 2022 被引用: 99
- Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease
著者: Kelly Shaw, Madeline Bertha, Tatyana Hofmekler, Pankaj Chopra, Tommi Vatanen, Abhiram Srivatsa, Jarod Prince, Archana Kumar, Cary G. Sauer, Michael E. Zwick, Glen A. Satten, Aleksandar D. Kostic, Jennifer G. Mullé, Ramnik J. Xavier, Subra Kugathasan - Genome Medicine 2016 被引用: 284
- Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children
著者: Guoyan Zhao, Tommi Vatanen, Lindsay Droit, Arnold Park, Aleksandar D. Kostic, Tiffany Poon, Hera Vlamakis, Heli Siljander, Taina Härkönen, Anu-Maaria Hämäläinen, Aleksandr Peet, Vallo Tillmann, Jorma Ilonen, David Wang, Mikael Knip, Ramnik J. Xavier, Herbert W. Virgin - National Academy of Sciences, Proceedings of the National Academy of Sciences 2017 被引用: 300
- Sequence-structure-function relationships in the microbial protein universe
著者: Julia Koehler Leman, Paweł Szczerbiak, P. Douglas Renfrew, Vladimir Gligorijević, Daniel Berenberg, Tommi Vatanen, Bryn C. Taylor, Chris Chandler, Stefan Janssen, Andras Pataki, Nick Carriero, I. Fisk, Ramnik J. Xavier, Rob Knight, Richard Bonneau, Tomasz Kościółek - Nature Communications 2023 被引用: 102
- The influence of a short-term gluten-free diet on the human gut microbiome
著者: Marc Jan Bonder, Ettje F. Tigchelaar, Xianghang Cai, Gosia Trynka, María Carmen Cénit, Barbara Hrdličková, Huanzi Zhong, Tommi Vatanen, Dirk Gevers, Cisca Wijmenga, Yang Wang, Alexandra Zhernakova - Genome Medicine 2016 被引用: 286
- A gut microbial peptide and molecular mimicry in the pathogenesis of type 1 diabetes
著者: Khyati Girdhar, Qian Huang, I‐Ting Chow, Tommi Vatanen, Claudia Brady, Amol Raisingani, Patrick Autissier, Mark A. Atkinson, William W. Kwok, C. Ronald Kahn, Emrah Altındiş - National Academy of Sciences, Proceedings of the National Academy of Sciences 2022 被引用: 89
- Strain engraftment competition and functional augmentation in a multi-donor fecal microbiota transplantation trial for obesity
著者: Brooke C. Wilson, Tommi Vatanen, Thilini N. Jayasinghe, Karen S. W. Leong, José G. B. Derraik, Benjamin B. Albert, Valentina Chiavaroli, Darren Svirskis, Kathryn L. Beck, Cathryn A. Conlon, Yannan Jiang, William Schierding, David J. Holland, Wayne S. Cutfield, Justin M. O’Sullivan - Microbiome 2021 被引用: 106
- Phages in the Gut Ecosystem
著者: Michele Zuppi, Heather Hendrickson, Justin M. O’Sullivan, Tommi Vatanen - Frontiers in Cellular and Infection Microbiology 2022 被引用: 100
