BioTIME: A database of biodiversity time series for the Anthropocene

著者: María Dornelas, Laura H. Antão, Faye Moyes, Amanda E. Bates, Anne E. Magurran, Dušan Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Haley Arnold, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Miguel Barbosa, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti‐Cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Geraldo de Carvalho, Edward Castañeda‐Moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan K. Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, S. Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian Evans, Tung‐Yung Fan, Fabiano Turini Farah, L. Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidélis, Robert N. L. Fitt, Anna Maria Fosaa, Geraldo Antônio Daher Corrêa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone‐Barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutiérrez, Stephen S. Hale, Mark E. Harmon, John Harte, G. L. Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew S. Hoey, Gert Van Hoey, Annika Hofgaard, Kristen T. Holeck, Robert D. Hollister, Richard T. Holmes, Mia O. Hoogenboom, Chih‐hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill F. Johnstone, Julia Jones, Faith A. M. Jones, Jungwon Kang, Tasrif Kartawijaya, Erin Keeley, Douglas Kelt, Rebecca Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra Kortz, Kamil Král, Linda A. Kuhnz, Chao‐Yang Kuo, David J. Kushner, Claire Laguionie‐Marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David C. Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López‐Baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain Matthews, Kent P. McFarland, Brian J. McGill, Diane M. McKnight, William O. McLarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, N. A. Milchakova, Tom Moens, Even Moland, Jon A. Moore, Carolina Mathias Moreira, Jörg Müller, Grace E. P. Murphy, Isla H. Myers‐Smith, Randall W. Myster, А. Д. Наумов, Francis Neat, James A. Nelson, Michael Nelson, Stephen Newton, Natalia Norden, Jeffrey C. Oliver, Esben Moland Olsen, В. Г. Онипченко, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Trilestari Pardede, David M. Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez‐Matus, Oscar Pizarro, Francesco Pomati, Eric Post, H.H.T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B.R. Ramesh, O. Ramos, Andrew Rassweiler, José Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai van Rijn, Ricardo Rocha, Víctor H. Rivera‐Monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise de Cerqueira Rossa‐Feres, Lars G. Rudstam, Henry A. Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy B. Rybicki, Andrew L. Rypel, Sofia Sal, Beatriz Salgado, Flavio Antônio Maës dos Santos, A. P. Savassi-Coutinho, Sara E. Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang‐Tsao Shao, Gaius R. Shaver, Sally A. Sherman, Thomas W. Sherry, Jacek Siciński, Caya Sievers, Ana Carolina da Silva, Fernando Rodrigues da Silva, Fabio L. Silveira, Jasper A. Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel Barros Gonçalves de Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick D. Stuart‐Smith, Yzél Rondon Súarez, Sarah R. Supp, Jorge Yoshio Tamashiro, S.A. Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fábio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš Vrška, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, D. J. Watts, Sara Jane Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin J. Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Kyle Zawada, Michael L. Zettler - Global Ecology and Biogeography 2018 被引用: 450

MOTIVATION: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. MAIN TYPES OF VARIABLES INCLUDED: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. SPATIAL LOCATION AND GRAIN: ). TIME PERIOD AND GRAIN: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. MAJOR TAXA AND LEVEL OF MEASUREMENT: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates. SOFTWARE FORMAT: .csv and .SQL.