David S. Roos
Active 1979–2024
- 130
- Papers
- 34,709
- Citations
- 99
- h-index
- 126
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology34.8%
- Immunology and Microbiology23.8%
- Medicine22.7%
- Agricultural and Biological Sciences9.5%
- Environmental Science2.6%
- Computer Science2.3%
- Other4.3%
Topics
- Genomics and Phylogenetic Studies6.6%
- Toxoplasma gondii Research Studies5.3%
- Malaria Research and Control4.4%
- Parasitic Infections and Diagnostics3.4%
- Trypanosoma species research and implications2.3%
- Mosquito-borne diseases and control2.2%
- Other75.8%
Coauthors
- Jessica C. Kissinger29
- Omar S. Harb26
- Brian P. Brunk24
- Bindu Gajria14
- Robert G. K. Donald14
- Christian J. Stoeckert13
- Cristina Aurrecoechea13
- John Brestelli12
- Deborah F. Pinney11
- John Iodice11
- Steve Fischer11
- Boris Striepen10
- Christian J. Stoeckert Jr.10
- Gregory R. Grant10
- Mark Heiges9
- Matthew Berriman9
- Daniel P. Beiting8
- Dhanasekaran Shanmugam8
- Xin Gao8
- Aaron J. Mackey7
- Buddy Ullman7
- Christiane Hertz-Fowler7
- Kathryn Crouch7
- Ke Hu7
All papers
- OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes
Authors: Li Li, Christian J. Stoeckert, David S. Roos - Genome Research 2003 cited by 6,149
- VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center
Authors: B Kirtley Amos, Cristina Aurrecoechea, Matthieu Barba, Ana Barreto, Evelina Y. Basenko, Wojciech Bażant, Robert Belnap, Ann S. Blevins, Ulrike Böhme, John Brestelli, Brian P. Brunk, Mark X. Caddick, Danielle Callan, Lahcen Campbell, Mikkel Christensen, George K. Christophides, Kathryn Crouch, Kristina A. Davis, Jeremy D. DeBarry, Ryan Doherty, Yikun Duan, Michael E. Dunn, Dave Falke, Steve Fisher, Paul Flicek, Brett Fox, Bindu Gajria, Gloria I. Giraldo-Calderón, Omar S. Harb, Elizabeth I. Harper, Christiane Hertz‐Fowler, Mark J. Hickman, Connor Howington, Sufen Hu, Jay C. Humphrey, John Iodice, Andrew R. Jones, J. Judkins, Sarah Kelly, Jessica C. Kissinger, Dae Kun Kwon, Kristopher Lamoureux, Daniel J. Lawson, Wei Li, Kallie Lies, Disha Lodha, Jamie Long, Robert M. MacCallum, G. Maslen, Mary Ann McDowell, Jarosław Nabrzyski, David S. Roos, Samuel S. C. Rund, Stephanie Schulman, Achchuthan Shanmugasundram, Vasily Sitnik, Drew Spruill, David Starns, Christian J. Stoeckert, Sheena Shah Tomko, Haiming Wang, Susanne Warrenfeltz, Robert Wieck, Paul A. Wilkinson, Lin Xu, Jie Zheng - Nucleic Acids Research, Nucleic Acids Res. 2021 cited by 527
- A review of the global burden, novel diagnostics, therapeutics, and vaccine targets for cryptosporidium
Authors: William Checkley, A. Clinton White, Devan Jaganath, Michael J. Arrowood, Rachel M. Chalmers, Xian‐Ming Chen, Ronald Fayer, Jeffrey K. Griffiths, Richard L. Guerrant, Lizbeth Hedstrom, Christopher D. Huston, Karen L. Kotloff, Gagandeep Kang, Jan R. Mead, Mark A. Miller, William A. Petri, Jeffrey W. Priest, David S. Roos, Boris Striepen, R.C.A. Thompson, Honorine Ward, Wesley A Van Voorhis, Lihua Xiao, Guan Zhu, Eric R. Houpt - The Lancet Infectious Diseases 2014 cited by 1,010
- VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023
Authors: Jorge Álvarez-Jarreta, B Kirtley Amos, Cristina Aurrecoechea, Saikou Y. Bah, Matthieu Barba, Ana Barreto, Evelina Y. Basenko, Robert Belnap, Ann S. Blevins, Ulrike Böhme, John Brestelli, Stuart M. Brown, Danielle Callan, Lahcen Campbell, George K. Christophides, Kathryn Crouch, Helen Davison, Jeremy D. DeBarry, Richard Demko, Ryan Doherty, Yikun Duan, Walter Dundore, Sarah Dyer, Dave Falke, Steve Fischer, Bindu Gajria, Daniel Galdi, Gloria I. Giraldo-Calderón, Omar S. Harb, Elizabeth I. Harper, Danica Helb, Connor Howington, Sufen Hu, Jay C. Humphrey, John Iodice, Andrew R. Jones, J. Judkins, Sarah Kelly, Jessica C. Kissinger, Nupur Kittur, Dae Kun Kwon, Kristopher Lamoureux, Wei Li, Disha Lodha, Robert M. MacCallum, G. Maslen, Mary Ann McDowell, Jeremy S. Myers, Mustafa V. Nural, David S. Roos, Samuel S. C. Rund, Achchuthan Shanmugasundram, Vasily Sitnik, Drew Spruill, David Starns, Sheena Shah Tomko, Haiming Wang, Susanne Warrenfeltz, Robert Wieck, Paul A. Wilkinson, Jie Zheng - Nucleic Acids Research 2023 cited by 248
- FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes
Authors: Evelina Y. Basenko, Jane A. Pulman, Achchuthan Shanmugasundram, Omar S. Harb, Kathryn Crouch, David Starns, Susanne Warrenfeltz, Cristina Aurrecoechea, Christian J. Stoeckert, Jessica C. Kissinger, David S. Roos, Christiane Hertz‐Fowler - Journal of Fungi 2018 cited by 412
- PlasmoDB: a functional genomic database for malaria parasites
Authors: Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Jennifer Dommer, S. Fischer, Bindu Gajria, Xiaorong Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, F. Innamorato, John Iodice, Jessica C. Kissinger, E. Kraemer, Weizhong Li, John A. Miller, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, C. A. Ross, Christian J. Stoeckert, Charles Treatman, Hong Wang - Nucleic Acids Research, Nucleic Acids Res. 2008 cited by 1,295
- TriTrypDB: a functional genomic resource for the Trypanosomatidae
Authors: Martin Aslett, Cristina Aurrecoechea, Matthew Berriman, John Brestelli, Brian P. Brunk, Mark Carrington, Daniel P. Depledge, Steve Fischer, Bindu Gajria, Xin Gao, Malcolm J. Gardner, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Christiane Hertz-Fowler, Robin Houston, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, Flora J. Logan, John A. Miller, Siddhartha Mitra, Peter J. Myler, Vishal Nayak, Cary Pennington, Isabelle Phan, Deborah F. Pinney, Gowthaman Ramasamy, Matthew B. Rogers, David S. Roos, Chris Ross, Dhileep Sivam, Deborah F. Smith, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Sandhya Subramanian, Ryan Thibodeau, Adrian Tivey, Charles Treatman, Giles Velarde, Haiming Wang - Nucleic Acids Research, Nucleic Acids Res. 2009 cited by 1,050
- The Quest for Orthologs orthology benchmark service in 2022
Authors: Yannis Nevers, Tamsin E. M. Jones, Dushyanth Jyothi, Bethan Yates, Meritxell Ferret, Laura Portell-Silva, Laia Codó, Salvatore Cosentino, Marina Marcet‐Houben, Anna Vlasova, Laetitia Poidevin, Arnaud Kress, Mark Hickman, Emma Persson, Ivana Piližota, Cristina Guijarro-Clarke, Adrian Altenhoff, Elspeth A Bruford, Salvatore Cosentino, Christophe Dessimoz, Ingo Ebersberger, David Emms, Toni Gabaldón, Natasha Glover, Cristina Guijarro-Clarke, Mark Hickman, Yanhui Hu, Wataru Iwasaki, Tamsin E M Jones, Dushyanth Jyothi, Arnaud Kress, Odile Lecompte, Benjamin Linard, Marina Marcet‐Houben, María Martin, Yannis Nevers, Emma Persson, Ivana Piližota, Laetitia Poidevin, David S. Roos, Erik Sonhammer, Paul D. Thomas, David Thybert, Klaas Vandepoele, Anna Vlasova, Bethan Yates, Salvador Capella-Gutiérrez, Laia Codó, Meritxell Ferret, Asier Gonzalez‐Uriarte, Javier Garrayo-Ventas, Laura Portell-Silva, Dmitry Repchevsky, Vicky Sundesha, Wataru Iwasaki, Odile Lecompte, Erik L. L. Sonnhammer, David S. Roos, Toni Gabaldón, David Thybert, Paul D. Thomas, Yanhui Hu, David Emms, Elspeth A. Bruford, Salvador Capella-Gutiérrez, María Martin, Christophe Dessimoz, Adrian Altenhoff - Nucleic Acids Research, Nucleic Acids Res. 2022 cited by 98
- TriTrypDB: An integrated functional genomics resource for kinetoplastida
Authors: Achchuthan Shanmugasundram, David Starns, Ulrike Böhme, B Kirtley Amos, Paul A. Wilkinson, Omar S. Harb, Susanne Warrenfeltz, Jessica C. Kissinger, Mary Ann McDowell, David S. Roos, Kathryn Crouch, Andrew R. Jones - PLoS neglected tropical diseases 2023 cited by 115
- FungiDB: an integrated functional genomics database for fungi
Authors: Jason E. Stajich, Todd W. Harris, Brian P. Brunk, John Brestelli, Steve Fischer, Omar S. Harb, Jessica C. Kissinger, Wei Li, Vishal Nayak, Deborah F. Pinney, Christian J. Stoeckert Jr., David S. Roos - Nucleic Acids Research, Nucleic Acids Res. 2011 cited by 365
- ToxoDB: an integrated Toxoplasma gondii database resource
Authors: Bindu Gajria, Amit Bahl, John Brestelli, Jennifer Dommer, Stefanie Fischer, Xin Gao, Mark Heiges, John Iodice, Jessica C. Kissinger, Aaron J. Mackey, Deborah F. Pinney, David S. Roos, Christian J. Stoeckert, Hui Wang, Brian P. Brunk - Nucleic Acids Research, Nucleic Acids Res. 2007 cited by 544
- The Cytokines Interleukin 27 and Interferon-γ Promote Distinct Treg Cell Populations Required to Limit Infection-Induced Pathology
Authors: Aisling O’Hara Hall, Daniel P. Beiting, Cristina M. Tato, Beena John, Guillaume Oldenhove, Cláudia Lombana, Gretchen Harms Pritchard, Jonathan S. Silver, Nicolas Bouladoux, Jason S. Stumhofer, Tajie H. Harris, John R. Grainger, Elia D. Tait Wojno, Sagie Wagage, David S. Roos, Philip Scott, Laurence A. Turka, Sara Cherry, Steven L. Reiner, Daniel Cua, Yasmine Belkaid, M. Merle Elloso, Christopher A. Hunter - Immunity 2012 cited by 346
- Organellar dynamics during the cell cycle of Toxoplasma gondii
Authors: Manami Nishi, Ke Hu, John M. Murray, David S. Roos - Journal of Cell Science 2008 cited by 286
- A novel polymer of tubulin forms the conoid of Toxoplasma gondii
Authors: Ke Hu, David S. Roos, John M. Murray - The Journal of Cell Biology 2002 cited by 209
- Chapter 3: Molecular Tools for Genetic Dissection of the Protozoan Parasite Toxoplasma gondii
Authors: David S. Roos, Robert G. K. Donald, Naomi S. Morrissette, A. Lindsay C. Moulton - Methods in cell biology 1995 cited by 670
- Chemical genetics of Plasmodium falciparum
Authors: W. Armand Guiguemde, Anang A. Shelat, David C. Bouck, Sandra Duffy, Gregory J. Crowther, Paul H. Davis, David C. Smithson, Michele Connelly, Julie Clark, Fangyi Zhu, Marı́a Belén Jiménez-Dı́az, Maria Santos Martínez, Emily B. Wilson, Abhai K. Tripathi, Jiří Gut, Elizabeth R. Sharlow, Ian Bathurst, Farah El Mazouni, Joseph Fowble, Isaac Forquer, Paula L. McGinley, Steve Castro, Íñigo Angulo‐Barturen, Santiago Ferrer, Philip J. Rosenthal, Joseph L. DeRisi, David Sullivan, John S. Lazo, David S. Roos, Michael K. Riscoe, Margaret A. Phillips, Pradipsinh K. Rathod, Wesley C. Van Voorhis, Vicky M. Avery, R. Kiplin Guy - Nature 2010 cited by 568
- Cytoskeletal Components of an Invasion Machine—The Apical Complex of Toxoplasma gondii
Authors: Ke Hu, Jeff Johnson, Laurence Florens, Martin Fraunholz, Sapna Suravajjala, Camille DiLullo, John R. Yates, David S. Roos, John M. Murray - PLoS Pathogens 2006 cited by 326
- VectorBase.org updates: bioinformatic resources for invertebrate vectors of human pathogens and related organisms
Authors: Gloria I. Giraldo-Calderón, Omar S. Harb, Sarah Kelly, Samuel S. C. Rund, David S. Roos, Mary Ann McDowell - Current Opinion in Insect Science 2021 cited by 119
- Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites
Authors: Yong Woo, Hifzur Rahman Ansari, Thomas D. Otto, Christen M. Klinger, Martin Kolísko, Jan Michálek, Alka Saxena, Dhanasekaran Shanmugam, Annageldi Tayyrov, Alaguraj Veluchamy, Shahjahan Ali, Axel Bernal, Javier del Campo, Jaromír Cihlář, Pavel Flegontov, Sebastian G. Gornik, Eva Hajdušková, Aleš Horák, Jan Janouškovec, Nicholas J Katris, Fred D. Mast, Diego Miranda‐Saavedra, Tobias Mourier, Raeece Naeem, Mridul Nair, Aswini K. Panigrahi, Neil D. Rawlings, Eriko Padron-Regalado, Abhinay Ramaprasad, Nadira Samad, Aleš Tomčala, Jonathan Wilkes, Daniel E. Neafsey, Christian Doerig, Chris Bowler, Patrick J. Keeling, David S. Roos, Joel B. Dacks, Thomas J. Templeton, Ross F. Waller, Julius Lukeš, Miroslav Obornı́k, Arnab Pain - eLife 2015 cited by 328
- Local admixture of amplified and diversified secreted pathogenesis determinants shapes mosaic Toxoplasma gondii genomes
Authors: Hernán Lorenzi, Asis Khan, Michael S. Behnke, Sivaranjani Namasivayam, Lakshmipuram S. Swapna, Michalis Hadjithomas, Svetlana Karamycheva, Deborah F. Pinney, Brian P. Brunk, James W. Ajioka, Daniel Ajzenberg, John C. Boothroyd, Jon P. Boyle, Marie‐Laure Dardé, Maria Alejandra Diaz‐Miranda, J. P. Dubey, Heather Fritz, Solange María Gennari, Brian D. Gregory, Kami Kim, Jeroen P. J. Saeij, Chunlei Su, Michael W. White, Xing‐Quan Zhu, Daniel K. Howe, Benjamin M. Rosenthal, Michael E. Grigg, John Parkinson, Liang Liu, Jessica C. Kissinger, David S. Roos, L. David Sibley - Nature Communications 2016 cited by 275
- OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
Authors: Feng Chen, Aaron J. Mackey, Christian J. Stoeckert Jr., David S. Roos - Nucleic Acids Research, Nucleic Acids Res. 2005 cited by 923
- A Plastid of Probable Green Algal Origin in Apicomplexan Parasites
Authors: Sabine Köhler, Charles F. Delwiche, Paul W. Denny, Lewis G. Tilney, Paul Webster, Robert Wilson, Jeffrey D. Palmer, David S. Roos - Science 1997 cited by 764
- Stable molecular transformation of Toxoplasma gondii: a selectable dihydrofolate reductase-thymidylate synthase marker based on drug-resistance mutations in malaria.
Authors: Robert G. K. Donald, David S. Roos - National Academy of Sciences, Proceedings of the National Academy of Sciences 1993 cited by 361
- What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species
Authors: Evelina Y. Basenko, Achchuthan Shanmugasundram, Ulrike Böhme, David Starns, Paul A. Wilkinson, Helen Davison, Kathryn Crouch, G. Maslen, Omar S. Harb, B Kirtley Amos, Mary Ann McDowell, Jessica C. Kissinger, David S. Roos, Andrew R. Jones - Genetics 2024 cited by 49
