James R. Stone
Active 1962–2025
- 129
- Papers
- 28,464
- Citations
- 80
- h-index
- 123
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Medicine60.7%
- Biochemistry, Genetics and Molecular Biology23.2%
- Immunology and Microbiology4.6%
- Neuroscience3.6%
- Computer Science2.1%
- Physics and Astronomy1.2%
- Other4.6%
Topics
- Cancer Immunotherapy and Biomarkers2.5%
- Lung Cancer Treatments and Mutations2.5%
- MicroRNA in disease regulation2.4%
- IgG4-Related and Inflammatory Diseases2.2%
- COVID-19 Clinical Research Studies2%
- Traumatic Brain Injury and Neurovascular Disturbances1.3%
- Other87.1%
Coauthors
- Stephen T. Ahlers13
- Dejan Juric12
- Nicholas J. Tustison12
- John H. Stone10
- Brian Avants8
- Cristina Basso8
- Jessica Gill7
- Mari Mino–Kenudson7
- Vikram Deshpande7
- Allard C. van der Wal6
- Arezou Khosroshahi6
- Carmela D. Tan6
- Christopher J. Pinto6
- John P. Veinot6
- John T. Povlishock6
- Joseph J. Maleszewski6
- Mary N. Sheppard6
- Michael A. Marletta6
- Brian B. Avants5
- Charlotte S. Walmsley5
- Gaetano Thiene5
- Giulia d’Amati5
- Jagdish Butany5
- Mark E. Lindsay5
All papers
- COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets
Authors: Toni Delorey, Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe, Domenic Abbondanza, Stephen J. Fleming, Ayshwarya Subramanian, Daniel T. Montoro, Karthik A. Jagadeesh, Kushal K. Dey, Pritha Sen, Michal Slyper, Yered Pita-Juárez, Devan Phillips, Jana Biermann, Zohar Bloom‐Ackermann, Nikolaos Barkas, Andrea Ganna, James Gomez, Johannes C. Melms, Igor Katsyv, Erica Normandin, Pourya Naderi Yeganeh, Yury Popov, Siddharth S. Raju, Sebastian Niezen, Linus Tsai, Katherine J. Siddle, Malika Sud, Victoria M. Tran, Shamsudheen Karuthedath Vellarikkal, Yiping Wang, Liat Amir-Zilberstein, Deepak Atri, Joseph Beechem, Olga R. Brook, Jonathan Chen, Prajan Divakar, Phylicia Dorceus, J Engreitz, Adam L. Essene, Donna M. Fitzgerald, Robin Fropf, Steven Gazal, Joshua Gould, John Grzyb, Tyler Harvey, Jonathan L. Hecht, Tyler Hether, Judit Jané‐Valbuena, Michael Leney-Greene, Hui Ma, Cristin McCabe, Daniel E. McLoughlin, Eric Miller, Christoph Muus, Mari Niemi, Robert F. Padera, Liuliu Pan, Deepti Pant, Carmel Pe’er, Jenna Pfiffner-Borges, Christopher J. Pinto, Jacob Plaisted, Jason Reeves, Marty Ross, Melissa A. Rudy, Erroll H. Rueckert, Michelle Siciliano, Alexander Sturm, Ellen Todres, Avinash Waghray, Sarah Warren, Shuting Zhang, Daniel R. Zollinger, Lisa A. Cosimi, Rajat M. Gupta, Nir Hacohen, Hanina Hibshoosh, Winston Hide, Alkes L. Price, Jayaraj Rajagopal, Purushothama Rao Tata, Stefan Riedel, Gyöngyi Szabó, Timothy L. Tickle, Patrick T. Ellinor, Deborah T. Hung, Pardis C. Sabeti, Richard Novák, Robert Rogers, Donald E. Ingber, Z. Gordon Jiang, Dejan Juric, Mehrtash Babadi, Samouil L. Farhi, Benjamin Izar, James R. Stone and 9 more - Nature 2021 cited by 883
- The ANTsX ecosystem for quantitative biological and medical imaging
Authors: Nicholas J. Tustison, Philip A. Cook, Andrew J. Holbrook, Hans J. Johnson, John Muschelli, Gabriel A. Devenyi, Jeffrey Duda, Sandhitsu R. Das, Nicholas Cullen, Daniel L. Gillen, Michael A. Yassa, James R. Stone, James C. Gee, Brian Avants - Scientific Reports 2021 cited by 403
- EGFR Mutations and ALK Rearrangements Are Associated with Low Response Rates to PD-1 Pathway Blockade in Non–Small Cell Lung Cancer: A Retrospective Analysis
Authors: Justin F. Gainor, Alice T. Shaw, Lecia V. Sequist, Xiujun Fu, Christopher G. Azzoli, Zofia Piotrowska, Tiffany G. Huynh, Ling Zhao, Linnea Fulton, Katherine R. Schultz, Emily Howe, Anna F. Farago, Ryan J. Sullivan, James R. Stone, Subba R. Digumarthy, Teresa Morán, Aaron N. Hata, Yukako Yagi, Beow Y. Yeap, Jeffrey A. Engelman, Mari Mino–Kenudson - Clinical Cancer Research 2016 cited by 1,241
- Parallel Genomic Alterations of Antigen and Payload Targets Mediate Polyclonal Acquired Clinical Resistance to Sacituzumab Govitecan in Triple-Negative Breast Cancer
Authors: James T. Coates, Sheng Sun, Ignaty Leshchiner, Nayana Thimmiah, Elizabeth E. Martin, Daniel E. McLoughlin, Brian P. Danysh, Kara Slowik, Raquel A. Jacobs, Kahn Rhrissorrakrai, Filippo Utro, Chaya Levovitz, Elyssa N. Denault, Charlotte S. Walmsley, Avinash Kambadakone, James R. Stone, Steven J. Isakoff, Laxmi Parida, Dejan Juric, Gad Getz, Aditya Bardia, Leif W. Ellisen - Cancer Discovery 2021 cited by 223
- Polyclonal Secondary FGFR2 Mutations Drive Acquired Resistance to FGFR Inhibition in Patients with FGFR2 Fusion–Positive Cholangiocarcinoma
Authors: Lipika Goyal, Supriya K. Saha, Leah Y. Liu, Giulia Siravegna, Ignaty Leshchiner, Leanne G. Ahronian, Jochen K. Lennerz, Phuong Vu, Vikram Deshpande, Avinash Kambadakone, Benedetta Mussolin, Stephanie Reyes, Laura E. Henderson, Jiaoyuan Elisabeth Sun, Emily E. Van Seventer, Joseph M. Gurski, Sabrina Baltschukat, Barbara Schacher-Engstler, Louise Barys, Christelle Stamm, Pascal Furet, David P. Ryan, James R. Stone, A. John Iafrate, Gad Getz, Diana Graus Porta, Ralph Tiedt, Alberto Bardelli, Dejan Juric, Ryan B. Corcoran, Nabeel Bardeesy, Andrew X. Zhu - Cancer Discovery 2016 cited by 545
- Myocardial infarction accelerates atherosclerosis
Authors: Partha Dutta, Gabriel Courties, Ying Wei, Florian Leuschner, Rostic Gorbatov, Clinton S. Robbins, Yoshiko Iwamoto, Brian Thompson, Alicia L. Carlson, Timo Heidt, Maulik D. Majmudar, Felix Lasitschka, Martin Etzrodt, Peter Waterman, Michael T. Waring, Adam Chicoine, Anja M. van der Laan, Hans W.M. Niessen, Jan J. Piek, Barry B. Rubin, Jagdish Butany, James R. Stone, Hugo A. Katus, Sabina A. Murphy, David A. Morrow, Marc S. Sabatine, Claudio Vinegoni, Michael A. Moskowitz, Mikäel J. Pittet, Peter Libby, Charles P. Lin, Filip K. Świrski, Ralph Weissleder, Matthias Nahrendorf - Nature 2012 cited by 1,090
- Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements
Authors: Nicholas J. Tustison, Philip A. Cook, Arno Klein, Gang Song, Sandhitsu R. Das, Jeffrey T. Duda, Benjamin M. Kandel, Niels van Strien, James R. Stone, James C. Gee, Brian B. Avants - NeuroImage 2014 cited by 744
- Human and mouse trigeminal ganglia cell atlas implicates multiple cell types in migraine
Authors: Lite Yang, Mengyi Xu, Shamsuddin A. Bhuiyan, Jia Li, Jun Zhao, Randall J. Cohrs, Justin T. Susterich, Sylvia Signorelli, Ursula Green, James R. Stone, Dan Levy, Jochen K. Lennerz, William Renthal - Neuron 2022 cited by 194
- Cardiovascular magnetic resonance in immune checkpoint inhibitor-associated myocarditis
Authors: Lili Zhang, Magid Awadalla, Syed Mahmood, Anju Nohria, Malek Hassan, Franck Thuny, Daniel A. Zlotoff, Sean Murphy, James R. Stone, Doll Lauren Alexandra Golden, Raza M. Alvi, Adam Rokicki, Maeve Jones‐O’Connor, Justine V. Cohen, Lucie Heinzerling, Connor P. Mulligan, Merna Armanious, Ana Barac, Brian J. Forrestal, Ryan J. Sullivan, Raymond Y. Kwong, Eric H. Yang, Rongras Damrongwatanasuk, Carol L. Chen, Dipti Gupta, Michael Constantin Kirchberger, Javid J. Moslehi, Otávio R. Coelho‐Filho, Sarju Ganatra, Muhammad A. Rizvi, Gagan Sahni, Carlo G. Tocchetti, Valentina Mercurio, Michael Mahmoudi, Donald P. Lawrence, Kerry L. Reynolds, Jonathan W. Weinsaft, A. John Baksi, Stéphane Éderhy, John D. Groarke, Alexander R. Lyon, Michael G. Fradley, Paaladinesh Thavendiranathan, Tomas G. Neilan - European Heart Journal 2020 cited by 343
- PTEN Loss Mediates Clinical Cross-Resistance to CDK4/6 and PI3Kα Inhibitors in Breast Cancer
Authors: Carlotta Costa, Ye Wang, Amy Ly, Yasuyuki Hosono, Ellen Murchie, Charlotte S. Walmsley, Tiffany G. Huynh, Christopher Healy, Rachel Peterson, Shogo Yanase, Charles T. Jakubik, Laura E. Henderson, Leah J. Damon, Daria Timonina, Ioannis Sanidas, Christopher J. Pinto, Mari Mino–Kenudson, James R. Stone, Nicholas J. Dyson, Leif W. Ellisen, Aditya Bardia, Hiromichi Ebi, Cyril H. Benes, Jeffrey A. Engelman, Dejan Juric - Cancer Discovery 2019 cited by 269
- Consensus statement on the pathology of IgG4-related disease
Authors: Vikram Deshpande, Yoh Zen, John K. C. Chan, Eunhee E Yi, Yasuharu Sato, Tadashi Yoshino, Günter Klöppel, J.G. Heathcote, Arezou Khosroshahi, Judith A. Ferry, Rob C. Aalberse, Donald B. Bloch, William R. Brugge, Adrian C Bateman, Mollie N. Carruthers, Suresh T. Chari, Wah Cheuk, Lynn D. Cornell, Carlos Fernández‐del Castillo, David G. Forcione, Daniel L. Hamilos, Terumi Kamisawa, Satomi Kasashima, Shigeyuki Kawa, Mitsuhiro Kawano, Gregory Y. Lauwers, Yasufumi Masaki, Yasuni Nakanuma, Kenji Notohara, Kazuichi Okazaki, Ji Kon Ryu, Takako Saeki, Dushyant V. Sahani, Thomas C. Smyrk, James R. Stone, Masayuki Takahira, George Webster, Motohisa Yamamoto, Giuseppe Zamboni, Hisanori Umehara, John H. Stone - Modern Pathology 2012 cited by 2,577
- The 2019 American College of Rheumatology/European League Against Rheumatism Classification Criteria for IgG4‐Related Disease
Authors: Zachary S. Wallace, Ray Naden, Suresh T. Chari, Hyon K. Choi, Emanuel Della‐Torre, Jean‐Francois Dicaire, Phil A. Hart, Dai Inoue, Mitsuhiro Kawano, Arezou Khosroshahi, Kensuke Kubota, Marco Lanzillotta, Kazuichi Okazaki, Cory A. Perugino, Amita Sharma, Takako Saeki, Hiroshi Sekiguchi, N. Schleinitz, James R. Stone, Naoki Takahashi, Hisanori Umehara, George Webster, Yoh Zen, John H. Stone - Arthritis & Rheumatology 2019 cited by 658
- Deep learning enables genetic analysis of the human thoracic aorta
Authors: James P. Pirruccello, Mark Chaffin, Elizabeth L. Chou, Stephen J. Fleming, Honghuang Lin, Mahan Nekoui, Shaan Khurshid, Sam Friedman, Alexander G. Bick, Alessandro Arduini, Lu‐Chen Weng, Seung Hoan Choi, Amer-Denis Akkad, Puneet Batra, Nathan R. Tucker, Amelia Weber Hall, Carolina Roselli, Emelia J. Benjamin, Shamsudheen Karuthedath Vellarikkal, Rajat M. Gupta, Christian M. Stegmann, Dejan Juric, James R. Stone, Ramachandran S. Vasan, Jennifer E. Ho, Udo Hoffmann, Steven A. Lubitz, Anthony Philippakis, Mark E. Lindsay, Patrick T. Ellinor - Nature Genetics 2021 cited by 207
- Clonal expansion of CD4+ cytotoxic T lymphocytes in patients with IgG4-related disease
Authors: Hamid Mattoo, Vinay S. Mahajan, Takashi Maehara, Vikram Deshpande, Emanuel Della‐Torre, Zachary S. Wallace, Maria Kulikova, Jefte M. Drijvers, Joe Daccache, Mollie N. Carruthers, Flavia V. Castelino, James R. Stone, John H. Stone, Shiv Pillai, John H. Stone, Shiv Pillai - Journal of Allergy and Clinical Immunology 2016 cited by 416
- Targeted Deletion Reveals Essential and Overlapping Functions of the miR-17∼92 Family of miRNA Clusters
Authors: Andrea Ventura, Amanda Young, Monte M. Winslow, Laura Lintault, Alex Meissner, Stefan J. Erkeland, Jamie J. Newman, Roderick T. Bronson, Denise Crowley, James R. Stone, Rudolf Jaenisch, Phillip A. Sharp, Tyler Jacks - Cell 2008 cited by 1,607
- The infarcted myocardium solicits GM-CSF for the detrimental oversupply of inflammatory leukocytes
Authors: Atsushi Anzai, Jennifer L. Choi, Shun He, Ashley M. Fenn, Manfred Nairz, Sara Rattik, Cameron S. McAlpine, John E. Mindur, Christopher T. Chan, Yoshiko Iwamoto, Benoit Tricot, Gregory R. Wojtkiewicz, Ralph Weissleder, Peter Libby, Matthias Nahrendorf, James R. Stone, Burkhard Becher, Filip K. Świrski - The Journal of Experimental Medicine 2017 cited by 210
- Duration of SARS-CoV-2 mRNA vaccine persistence and factors associated with cardiac involvement in recently vaccinated patients
Authors: Aram J. Krauson, Faye Victoria C. Casimero, Zakir Siddiquee, James R. Stone - npj Vaccines 2023 cited by 74
- Pathological features of COVID-19-associated myocardial injury: a multicentre cardiovascular pathology study
Authors: Cristina Basso, Ornella Leone, Stefania Rizzo, Monica De Gaspari, Allard C. van der Wal, Marie-Christine Aubry, Melanie C. Bois, Peter T. Lin, Joseph J. Maleszewski, James R. Stone - European Heart Journal 2020 cited by 476
- EGFR Inhibition Potentiates FGFR Inhibitor Therapy and Overcomes Resistance in FGFR2 Fusion–Positive Cholangiocarcinoma
Authors: Qibiao Wu, Yuanli Zhen, Lei Shi, Phuong Vu, Patricia Greninger, Ramzi Adil, Joshua Merritt, Regina Egan, Meng-Ju Wu, Xunqin Yin, Cristina R. Ferrone, Vikram Deshpande, Islam Baiev, Christopher J. Pinto, Daniel E. McLoughlin, Charlotte S. Walmsley, James R. Stone, John D. Gordan, Andrew X. Zhu, Dejan Juric, Lipika Goyal, Cyril H. Benes, Nabeel Bardeesy - Cancer Discovery 2022 cited by 97
- Hydrogen Peroxide: A Signaling Messenger
Authors: James R. Stone, Suping Yang - Antioxidants and Redox Signaling 2006 cited by 1,159
- 2011 Consensus statement on endomyocardial biopsy from the Association for European Cardiovascular Pathology and the Society for Cardiovascular Pathology
Authors: Ornella Leone, John P. Veinot, Annalisa Angelini, Ulrik Baandrup, Cristina Basso, Gerald J. Berry, Patrick Bruneval, Margaret Burke, Jagdish Butany, Fiorella Calabrese, Giulia d’Amati, William D. Edwards, John T. Fallon, Michael C. Fishbein, Patrick J. Gallagher, Marc K. Halushka, Bruce M. McManus, Angela Pucci, E. René Rodríguez, Jeffrey E. Saffitz, Mary N. Sheppard, Charles Steenbergen, James R. Stone, Carmela D. Tan, Gaetano Thiene, Allard C. van der Wal, Gayle L. Winters - Cardiovascular Pathology 2011 cited by 528
- A Framework to Advance Biomarker Development in the Diagnosis, Outcome Prediction, and Treatment of Traumatic Brain Injury
Authors: Elisabeth A. Wilde, Ina-Beate Wanner, Kimbra Kenney, Jessica Gill, James R. Stone, Seth G. Disner, Caroline Schnakers, Retsina Meyer, Eric M. Prager, Magali Haas, Andreas Jeromin - Journal of Neurotrauma 2022 cited by 75
- Acquired Resistance to Crizotinib from a Mutation in CD74–ROS1
Authors: Mark M. Awad, Ryohei Katayama, Michele McTigue, Wei Liu, Ya-Li Deng, Alexei Brooun, Luc Friboulet, Donghui Huang, Matthew D. Falk, Sergei Timofeevski, Keith D. Wilner, Elizabeth L. Lockerman, Tahsin Khan, Sidra Mahmood, Justin F. Gainor, Subba R. Digumarthy, James R. Stone, Mari Mino–Kenudson, James G. Christensen, A. John Iafrate, Jeffrey A. Engelman, Alice T. Shaw - New England Journal of Medicine 2013 cited by 413
- Cell-free DNA captures tumor heterogeneity and driver alterations in rapid autopsies with pre-treated metastatic cancer
Authors: Bernard Pereira, Christopher T. Chen, Lipika Goyal, Charlotte S. Walmsley, Christopher J. Pinto, Islam Baiev, Read Allen, Laura E. Henderson, Supriya K. Saha, Stephanie Reyes, Martin S. Taylor, Donna M. Fitzgerald, M. Broudo, Avinash Sahu, Xīn Gào, Wendy Winckler, A. Rose Brannon, Jeffrey A. Engelman, Rebecca Leary, James R. Stone, Catarina D. Campbell, Dejan Juric - Nature Communications 2021 cited by 73
