Janine Ptak
Active 1997–2026
- 37
- Papers
- 20,592
- Citations
- 30
- h-index
- 35
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology59.7%
- Medicine32.8%
- Neuroscience2.7%
- Immunology and Microbiology1.4%
- Chemistry0.9%
- Computer Science0.9%
- Other1.6%
Topics
- Cancer Genomics and Diagnostics11.2%
- PI3K/AKT/mTOR signaling in cancer4.2%
- Genetic factors in colorectal cancer3.4%
- Pancreatic and Hepatic Oncology Research3%
- Cancer Cells and Metastasis2.6%
- Epigenetics and DNA Methylation2.5%
- Other73.1%
Coauthors
- Natalie Silliman32
- Bert Vogelstein24
- Kenneth W. Kinzler24
- Lisa Dobbyn24
- Yuxuan Wang22
- Joshua D. Cohen19
- Maria Popoli18
- Jeanne Tie16
- Nickolas Papadopoulos16
- Peter Gibbs16
- Christopher Douville14
- Cristian Tomasetti9
- Joy Schaefer9
- Steve Szabo9
- Tian‐Li Wang9
- Victor E. Velculescu9
- Chetan Bettegowda8
- James K. V. Willson8
- Lu Li8
- Rachel Wong8
- Sanford D. Markowitz7
- Austin K. Mattox6
- D. Williams Parsons6
- Matthew Burge6
All papers
- Detection and localization of surgically resectable cancers with a multi-analyte blood test
Authors: Joshua D. Cohen, Lu Li, Yuxuan Wang, Christopher J. Thoburn, Bahman Afsari, Ludmila Danilova, Christopher Douville, Ammar A. Javed, Fay Wong, Austin K. Mattox, Ralph H. Hruban, Christopher L. Wolfgang, Michael Goggins, Marco Dal Molin, Tian‐Li Wang, Richard B.S. Roden, Alison P. Klein, Janine Ptak, Lisa Dobbyn, Joy Schaefer, Natalie Silliman, Maria Popoli, Joshua T Vogelstein, J. Dale Browne, Robert E. Schoen, Randall E. Brand, Jeanne Tie, Peter Gibbs, Hui‐Li Wong, Aaron S. Mansfield, Jin Jen, Samir Hanash, Massimo Falconi, Peter J. Allen, Shibin Zhou, Chetan Bettegowda, Luis A. Díaz, Cristian Tomasetti, Kenneth W. Kinzler, Bert Vogelstein, Anne Marie Lennon, Nickolas Papadopoulos - Science 2018 cited by 2,853
- Circulating Tumor DNA Analysis Guiding Adjuvant Therapy in Stage II Colon Cancer
Authors: Jeanne Tie, Joshua D. Cohen, Kamel Lahouel, Serigne Lo, Yuxuan Wang, Suzanne Kosmider, Rachel Wong, Jeremy Shapiro, Margaret Lee, Sam Harris, Adnan Khattak, Matthew Burge, Marion Harris, James Lynam, Louise Nott, Fiona Day, Theresa Hayes, Sue‐Anne McLachlan, Belinda Lee, Janine Ptak, Natalie Silliman, Lisa Dobbyn, Maria Popoli, Ralph H. Hruban, Anne Marie Lennon, Nicholas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Cristian Tomasetti, Peter Gibbs - New England Journal of Medicine 2022 cited by 976
- Circulating Tumor DNA Analyses as Markers of Recurrence Risk and Benefit of Adjuvant Therapy for Stage III Colon Cancer
Authors: Jeanne Tie, Joshua D. Cohen, Yuxuan Wang, Michael Christie, Koen Simons, Margaret Lee, Rachel Wong, Suzanne Kosmider, Sumitra Ananda, Joseph McKendrick, Belinda Lee, Jin Hee Cho, Ian Faragher, Ian T. Jones, Janine Ptak, Mary J. Schaeffer, Natalie Silliman, Lisa Dobbyn, Li Lü, Cristian Tomasetti, Nicholas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Peter Gibbs - JAMA Oncology 2019 cited by 692
- High Frequency of Mutations of the PIK3CA Gene in Human Cancers
Authors: Yardena Samuels, Zhenghe Wang, Alberto Bardelli, Natalie Silliman, Janine Ptak, Steve Szabo, Hai Yan, Adi F. Gazdar, Steven M. Powell, Gregory J. Riggins, James K. V. Willson, Sanford D. Markowitz, Kenneth W. Kinzler, Bert Vogelstein, Victor E. Velculescu - Science 2004 cited by 3,452
- The Origin of Highly Elevated Cell-Free DNA in Healthy Individuals and Patients with Pancreatic, Colorectal, Lung, or Ovarian Cancer
Authors: Austin K. Mattox, Christopher Douville, Yuxuan Wang, Maria Popoli, Janine Ptak, Natalie Silliman, Lisa Dobbyn, Joy Schaefer, Steve Lu, Alexander H. Pearlman, Joshua D. Cohen, Jeanne Tie, Peter Gibbs, Kamel Lahouel, Chetan Bettegowda, Ralph H. Hruban, Cristian Tomasetti, Peiyong Jiang, K.C. Allen Chan, Yuk Ming Dennis Lo, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein - Cancer Discovery 2023 cited by 178
- Combined circulating tumor DNA and protein biomarker-based liquid biopsy for the earlier detection of pancreatic cancers
Authors: Joshua D. Cohen, Ammar A. Javed, Christopher J. Thoburn, Fay Wong, Jeanne Tie, Peter Gibbs, C. Max Schmidt, Michele Yip-Schneider, Peter J. Allen, Mark Schattner, Randall E. Brand, Aatur D. Singhi, Gloria M. Petersen, Seung‐Mo Hong, Song Cheol Kim, Massimo Falconi, Claudio Doglioni, Matthew J. Weiss, Nita Ahuja, Jin He, Martin A. Makary, Anirban Maitra, Samir Hanash, Marco Dal Molin, Yuxuan Wang, Lu Li, Janine Ptak, Lisa Dobbyn, Joy Schaefer, Natalie Silliman, Maria Popoli, Michael Goggins, Ralph H. Hruban, Christopher L. Wolfgang, Alison P. Klein, Cristian Tomasetti, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Anne Marie Lennon - National Academy of Sciences, Proceedings of the National Academy of Sciences 2017 cited by 572
- The Consensus Coding Sequences of Human Breast and Colorectal Cancers
Authors: Tobias Sjöblom, Siân Jones, Laura D. Wood, D. Williams Parsons, Jimmy Lin, Thomas D. Barber, Diana Mandelker, Rebecca Leary, Janine Ptak, Natalie Silliman, Steve Szabo, Phillip Buckhaults, Christopher Farrell, Paul F. Meeh, Sanford D. Markowitz, Joseph Willis, Dawn Dawson, James K. V. Willson, Adi F. Gazdar, James Hartigan, Leo Wu, Changsheng Liu, Giovanni Parmigiani, Ben Ho Park, Kurtis E. Bachman, Nickolas Papadopoulos, Bert Vogelstein, Kenneth W. Kinzler, Victor E. Velculescu - Science 2006 cited by 3,183
- Detection of tumor-derived DNA in cerebrospinal fluid of patients with primary tumors of the brain and spinal cord
Authors: Yuxuan Wang, Simeon Springer, Ming Zhang, K. Wyatt McMahon, Isaac Kinde, Lisa Dobbyn, Janine Ptak, Henry Brem, Kaisorn L. Chaichana, Gary L. Gallia, Ziya L. Gokaslan, Mari L. Groves, George I. Jallo, Michael Lim, Alessandro Olivi, Alfredo Quiñones‐Hinojosa, Daniele Rigamonti, Greg Riggins, Daniel M. Sciubba, Jon Weingart, Jean‐Paul Wolinsky, Xiaobu Ye, Sueli Mieko Oba‐Shinjo, Suely Kazue Nagahashi Marie, Matthias Holdhoff, Nishant Agrawal, Luis A. Díaz, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Chetan Bettegowda - National Academy of Sciences, Proceedings of the National Academy of Sciences 2015 cited by 474
- Circulating tumor DNA dynamics and recurrence risk in patients undergoing curative intent resection of colorectal cancer liver metastases: A prospective cohort study
Authors: Jeanne Tie, Yuxuan Wang, Joshua D. Cohen, Lu Li, Wei Hong, Michael Christie, Hui‐Li Wong, Suzanne Kosmider, Rachel Wong, Benjamin Thomson, Julian Choi, Adrian Fox, Kathryn Field, Matthew Burge, Jenny Shannon, Dusan Kotasek, Niall C. Tebbutt, Christos S. Karapetis, Craig Underhill, Andrew Haydon, Joy Schaeffer, Janine Ptak, Cristian Tomasetti, Nicholas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Peter Gibbs - PLoS Medicine 2021 cited by 177
- The Genomic Landscapes of Human Breast and Colorectal Cancers
Authors: Laura D. Wood, D. Williams Parsons, Siân Jones, Jimmy Lin, Tobias Sjöblom, Rebecca Leary, Dong Shen, Simina M. Boca, Thomas D. Barber, Janine Ptak, Natalie Silliman, Steve Szabo, Zoltán Dezső, Vadim Ustyanksky, Tatiana Nikolskaya, Yuri Nikolsky, Rachel Karchin, Paul A. Wilson, Joshua S. Kaminker, Zemin Zhang, Randal Croshaw, Joseph Willis, Dawn Dawson, Michail Shipitsin, James K. V. Willson, Saraswati Sukumar, Kornélia Polyák, Ben Ho Park, Charit L. Pethiyagoda, P.V. Krishna Pant, Dennis G. Ballinger, Andrew B. Sparks, James Hartigan, Douglas R. Smith, Erick Suh, Nickolas Papadopoulos, Phillip Buckhaults, Sanford D. Markowitz, Giovanni Parmigiani, Kenneth W. Kinzler, Victor E. Velculescu, Bert Vogelstein - Science 2007 cited by 2,855
- A multimodality test to guide the management of patients with a pancreatic cyst
Authors: Simeon Springer, David L. Masica, Marco Dal Molin, Christopher Douville, Christopher J. Thoburn, Bahman Afsari, Lu Li, Joshua D. Cohen, Elizabeth D. Thompson, Peter J. Allen, David S. Klimstra, Mark Schattner, C. Max Schmidt, Michele Yip-Schneider, Rachel E. Simpson, Carlos Fernández-del Castillo, Mari Mino–Kenudson, William R. Brugge, Randall E. Brand, Aatur D. Singhi, Aldo Scarpa, Rita T. Lawlor, Roberto Salvia, Giuseppe Zamboni, Seung‐Mo Hong, Dae Wook Hwang, Jin‐Young Jang, Wooil Kwon, Niall Swan, Justin Geoghegan, Massimo Falconi, Stefano Crippa, Claudio Doglioni, Jorge Paulino, Richard D. Schulick, Barish H. Edil, Walter G. Park, Shinichi Yachida, Susumu Hijioka, Jeanin E. van Hooft, Jin He, Matthew J. Weiss, Richard A. Burkhart, Martin A. Makary, Marcia Irene Canto, Michael Goggins, Janine Ptak, Lisa Dobbyn, Joy Schaefer, Natalie Sillman, Maria Popoli, Alison P. Klein, Cristian Tomasetti, Rachel Karchin, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Christopher L. Wolfgang, Ralph H. Hruban, Anne Marie Lennon - Science Translational Medicine 2019 cited by 207
- Detection of low-frequency DNA variants by targeted sequencing of the Watson and Crick strands
Authors: Joshua D. Cohen, Christopher Douville, Jonathan C. Dudley, Brian J. Mog, Maria Popoli, Janine Ptak, Lisa Dobbyn, Natalie Silliman, Joy Schaefer, Jeanne Tie, Peter Gibbs, Cristian Tomasetti, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein - Nature Biotechnology 2021 cited by 91
- Evaluation of liquid from the Papanicolaou test and other liquid biopsies for the detection of endometrial and ovarian cancers
Authors: Yuxuan Wang, Lu Li, Christopher Douville, Joshua D. Cohen, Ting‐Tai Yen, Isaac Kinde, Karin Sundfelt, Susanne K. Kjær, Ralph H. Hruban, Ie‐Ming Shih, Tian‐Li Wang, Robert J. Kurman, Simeon Springer, Janine Ptak, Maria Popoli, Joy Schaefer, Natalie Silliman, Lisa Dobbyn, Edward J. Tanner, Ana M. Angarita, Maria Lycke, Kirsten Jochumsen, Bahman Afsari, Ludmila Danilova, Douglas A. Levine, К. Jardon, Xing Zeng, Jocelyne Arseneau, Lili Fu, Luis A. Díaz, Rachel Karchin, Cristian Tomasetti, Kenneth W. Kinzler, Bert Vogelstein, Amanda N. Fader, Lucy Gilbert, Nickolas Papadopoulos - Science Translational Medicine 2018 cited by 243
- Prognostic Potential of Circulating Tumor DNA Measurement in Postoperative Surveillance of Nonmetastatic Colorectal Cancer
Authors: Yuxuan Wang, Lu Li, Joshua D. Cohen, Isaac Kinde, Janine Ptak, Maria Popoli, Joy Schaefer, Natalie Silliman, Lisa Dobbyn, Jeanne Tie, Peter Gibbs, Cristian Tomasetti, Kenneth W. Kinzler, Nickolas Papadopoulos, Bert Vogelstein, Louise Olsson - JAMA Oncology 2019 cited by 240
- A Combination of Molecular Markers and Clinical Features Improve the Classification of Pancreatic Cysts
Authors: Simeon Springer, Yuxuan Wang, Marco Dal Molin, David L. Masica, Yuchen Jiao, Isaac Kinde, Amanda L. Blackford, Siva P. Raman, Christopher L. Wolfgang, Tyler M. Tomita, Noushin Niknafs, Christopher Douville, Janine Ptak, Lisa Dobbyn, Peter J. Allen, David S. Klimstra, Mark Schattner, C. Max Schmidt, Michele Yip-Schneider, Oscar W. Cummings, Randall E. Brand, Herbert J. Zeh, Aatur D. Singhi, Aldo Scarpa, Roberto Salvia, Giuseppe Malleo, Giuseppe Zamboni, Massimo Falconi, Jin‐Young Jang, Sun‐Whe Kim, Wooil Kwon, Seung‐Mo Hong, Ki Byung Song, Song Cheol Kim, Niall Swan, Jean Murphy, Justin Geoghegan, William R. Brugge, Carlos Fernández‐del Castillo, Mari Mino–Kenudson, Richard D. Schulick, Barish H. Edil, Volkan Adsay, Jorge Paulino, Jeanin E. van Hooft, Shinichi Yachida, Satoshi Nara, Nobuyoshi Hiraoka, Kenji Yamao, Susuma Hijioka, Van der Merwe, Michael Goggins, Marcia Irene Canto, Nita Ahuja, Kenzo Hirose, Martin A. Makary, Matthew J. Weiss, John L. Cameron, Meredith E. Pittman, James R. Eshleman, Luis A. Díaz, Nickolas Papadopoulos, Kenneth W. Kinzler, Rachel Karchin, Ralph H. Hruban, Bert Vogelstein, Anne Marie Lennon - Gastroenterology 2015 cited by 458
- Non-invasive detection of urothelial cancer through the analysis of driver gene mutations and aneuploidy
Authors: Simeon Springer, Chung‐Hsin Chen, Maria Del Carmen Rodriguez Peña, Lu Li, Christopher Douville, Yuxuan Wang, Joshua D. Cohen, Diana Taheri, Natalie Silliman, Joy Schaefer, Janine Ptak, Lisa Dobbyn, Maria Papoli, Isaac Kinde, Bahman Afsari, Aline C. Tregnago, Stephania Martins Bezerra, Christopher J. VandenBussche, Kazutoshi Fujita, Dilek Ertoy, Isabela W. Cunha, Lijia Yu, Trinity J. Bivalacqua, Arthur P. Grollman, Luis A. Díaz, Rachel Karchin, Ludmila Danilova, Chao‐Yuan Huang, Chia‐Tung Shun, Robert J. Turesky, Byeong Hwa Yun, Thomas A. Rosenquist, Yeong‐Shiau Pu, Ralph H. Hruban, Cristian Tomasetti, Nickolas Papadopoulos, Ken W Kinzler, Bert Vogelstein, Kathleen G. Dickman, George J. Netto - eLife 2018 cited by 187
- Circulating tumor DNA analysis informing adjuvant chemotherapy in locally advanced rectal cancer: The randomized AGITG DYNAMIC-Rectal study.
Authors: Jeanne Tie, Joshua D. Cohen, Yuxuan Wang, Pablo Gonzalez Ginestet, Rachel Wong, Jeremy Shapiro, Rob Campbell, Fiona Day, Theresa Hayes, Morteza Aghmesheh, Christos S. Karapetis, Maria Popoli, Lisa Dobbyn, Janine Ptak, Natalie Silliman, Christopher Douville, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Peter Gibbs - Journal of Clinical Oncology 2024 cited by 38
- Prognostic significance of postsurgery circulating tumor DNA in nonmetastatic colorectal cancer: Individual patient pooled analysis of three cohort studies
Authors: Jeanne Tie, Joshua D. Cohen, Serigne Lo, Yuxuan Wang, Lu Li, Michael Christie, Margaret Lee, Rachel Wong, Suzanne Kosmider, Iain Skinner, Hui‐Li Wong, Belinda Lee, Matthew Burge, Desmond Yip, Christos S. Karapetis, Timothy Price, Niall C. Tebbutt, Andrew Haydon, Janine Ptak, Mary J. Schaeffer, Natalie Silliman, Lisa Dobbyn, Maria Popoli, Cristian Tomasetti, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Peter Gibbs - International Journal of Cancer 2020 cited by 110
- Assessing aneuploidy with repetitive element sequencing
Authors: Christopher Douville, Joshua D. Cohen, Janine Ptak, Maria Popoli, Joy Schaefer, Natalie Silliman, Lisa Dobbyn, Robert E. Schoen, Jeanne Tie, Peter Gibbs, Michael Goggins, Christopher L. Wolfgang, Tian‐Li Wang, Ie‐Ming Shih, Rachel Karchin, Anne Marie Lennon, Ralph H. Hruban, Cristian Tomasetti, Chetan Bettegowda, Kenneth W. Kinzler, Nickolas Papadopoulos, Bert Vogelstein - National Academy of Sciences, Proceedings of the National Academy of Sciences 2020 cited by 80
- Machine learning to detect the SINEs of cancer
Authors: Christopher Douville, Kamel Lahouel, Albert Kuo, Haley Grant, Bracha Erlanger Avigdor, Samuel D. Curtis, Mahmoud Summers, Joshua D. Cohen, Yuxuan Wang, Austin K. Mattox, Jonathan C. Dudley, Lisa Dobbyn, Maria Popoli, Janine Ptak, Nadine T. Nehme, Natalie Silliman, Cheríe Blair, Katharine Romans, Christopher J. Thoburn, Jennifer Gizzi, Robert E. Schoen, Jeanne Tie, Peter Gibbs, Lan T. Ho‐Pham, Bich Tran, Thach Tran, Tuan V. Nguyen, Michael Goggins, Christopher L. Wolfgang, Tian‐Li Wang, Ie‐Ming Shih, Anne Marie Lennon, Ralph H. Hruban, Chetan Bettegowda, Kenneth W. Kinzler, Nickolas Papadopoulos, Bert Vogelstein, Cristian Tomasetti - Science Translational Medicine 2024 cited by 21
- Circulating tumor DNA analysis guiding adjuvant therapy in stage II colon cancer: 5-year outcomes of the randomized DYNAMIC trial
Authors: Jeanne Tie, Yuxuan Wang, Serigne Lo, Kamel Lahouel, Joshua D. Cohen, Rachel Wong, Jeremy Shapiro, S.J. Harris, Adnan Khattak, Matthew Burge, Margaret Lee, Marion Harris, Sue‐Anne McLachlan, Lisa G. Horvath, Christos S. Karapetis, Jenny Shannon, Madhu Singh, Desmond Yip, Sumitra Ananda, Craig Underhill, Janine Ptak, Natalie Silliman, Lisa Dobbyn, Maria Popoli, Nickolas Papadopoulos, Cristian Tomasetti, Kenneth W. Kinzler, Bert Vogelstein, Peter Gibbs - Nature Medicine 2025 cited by 90
- Detection of rare mutations, copy number alterations, and methylation in the same template DNA molecules
Authors: Yuxuan Wang, Christopher Douville, Joshua D. Cohen, Austin K. Mattox, Sam Curtis, Natalie Silliman, Maria Popoli, Janine Ptak, Lisa Dobbyn, Nadine Nehme, Jonathan C. Dudley, Mahmoud Summers, Ming Zhang, Lan T. Ho‐Pham, Ngoc Bich Tran, Thach Tran, Tuan V. Nguyen, Chetan Bettegowda, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein - National Academy of Sciences, Proceedings of the National Academy of Sciences 2023 cited by 41
- Detection of malignant peripheral nerve sheath tumors in patients with neurofibromatosis using aneuploidy and mutation identification in plasma
Authors: Austin K Mattox, Christopher Douville, Natalie Silliman, Janine Ptak, Lisa Dobbyn, Joy Schaefer, Maria Popoli, Cherie Blair, Kathy Judge, Kai Pollard, Christine Pratilas, Jaishri Blakeley, Fausto Rodriguez, Nickolas Papadopoulos, Allan Belzberg, Chetan Bettegowda - eLife 2022 cited by 22
- Seq-ing the SINEs of central nervous system tumors in cerebrospinal fluid
Authors: Christopher Douville, Samuel M. Curtis, Mahmoud Summers, Tej D. Azad, Jordina Rincón-Torroella, Yuxuan Wang, Austin K. Mattox, Bracha Erlanger Avigdor, Jonathan A. Dudley, Joshua Materi, Divyaansh Raj, Sumil K. Nair, Debarati Bhanja, Kyle Tuohy, Lisa Dobbyn, Maria Popoli, Janine Ptak, Nadine T. Nehme, Natalie Silliman, Cheríe Blair, Kathy Judge, Gary L. Gallia, Mari L. Groves, Christopher M. Jackson, Eric M. Jackson, John Laterra, Michael Lim, Debraj Mukherjee, Jon Weingart, Jarushka Naidoo, Carl Koschmann, Natalya Smith, Karisa C. Schreck, Carlos A. Pardo, Michael Glantz, Matthias Holdhoff, Kenneth W. Kinzler, Nickolas Papadopoulos, Bert Vogelstein, Chetan Bettegowda - Cell Reports Medicine 2023 cited by 18
