Kyle R. Covington
Active 2010–2024
- 41
- Papers
- 18,588
- Citations
- 32
- h-index
- 40
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Medicine53.7%
- Biochemistry, Genetics and Molecular Biology40.8%
- Immunology and Microbiology2.3%
- Computer Science1%
- Neuroscience0.4%
- Agricultural and Biological Sciences0.3%
- Other1.5%
Topics
- Cancer Genomics and Diagnostics8%
- Thyroid Cancer Diagnosis and Treatment3.9%
- Cancer Immunotherapy and Biomarkers2.9%
- Ferroptosis and cancer prognosis2.7%
- Genetic factors in colorectal cancer2.4%
- Epigenetics and DNA Methylation2.2%
- Other77.9%
Coauthors
- Robert W. Cook12
- David A. Wheeler10
- Donna M. Muzny8
- Eve Shinbrot8
- Richard A. Gibbs7
- HarshaVardhan Doddapaneni6
- Sarah J. Kurley6
- Brian Gastman5
- Eddy C. Hsueh5
- Gad Getz5
- Jennifer Drummond5
- Matthew S. Goldberg5
- Ann P. Quick4
- John T. Vetto4
- Marie‐Claude Gingras4
- Reanne Bowlby4
- Xi Liu4
- Aaron S. Farberg3
- Adrian Ally3
- Brian J. Martin3
- Brooke Middlebrook3
- Chad J. Creighton3
- Denise Brooks3
- Jaegil Kim3
All papers
- The repertoire of mutational signatures in human cancer
Authors: Ludmil B. Alexandrov, Jaegil Kim, Nicholas J. Haradhvala, Mi Ni Huang, Alvin Wei Tian Ng, Yang Wu, Arnoud Boot, Kyle R. Covington, Dmitry A. Gordenin, Erik N. Bergstrom, S. M. Ashiqul Islam, Núria López-Bigas, Leszek J. Klimczak, John R. McPherson, Sandro Morganella, Radhakrishnan Sabarinathan, David A. Wheeler, Ville Mustonen, PCAWG Mutational Signatures Working Group, Ludmil B. Alexandrov, Erik N. Bergstrom, Arnoud Boot, Paul C. Boutros, Kin Chan, Kyle R. Covington, Akihiro Fujimoto, Gad Getz, Dmitry A. Gordenin, Nicholas J. Haradhvala, Mi Ni Huang, S. M. Ashiqul Islam, Marat D. Kazanov, Jaegil Kim, Leszek J. Klimczak, Núria López-Bigas, Michael S. Lawrence, Iñigo Martincorena, John R. McPherson, Sandro Morganella, Ville Mustonen, Hidewaki Nakagawa, Alvin Wei Tian Ng, Paz Polak, Stephenie D. Prokopec, Steven A. Roberts, Steve Rozen, Radhakrishnan Sabarinathan, Natalie Saini, Tatsuhiro Shibata, Yuichi Shiraishi, Michael R. Stratton, Bin Tean Teh, Ignacio Vázquez-Garćıa, David A. Wheeler, Yang Wu, Fouad Yousif, Willie Yu, Gad Getz, Steven G. Rozen, Michael R. Stratton, Lauri A. Aaltonen, Federico Abascal, Adam Abeshouse, Hiroyuki Aburatani, David J. Adams, Nishant Agrawal, Keun Soo Ahn, Sung‐Min Ahn, Hiroshi Aikata, Rehan Akbani, Kadir C. Akdemir, Hikmat Al‐Ahmadie, Sultan T. Al‐Sedairy, Fátima Al‐Shahrour, Malik Alawi, Monique Albert, Kenneth Aldape, Ludmil B. Alexandrov, Adrian Ally, Kathryn Alsop, Eva G. Álvarez, Fernanda Amary, Samirkumar B. Amin, Brice Aminou, Ole Ammerpohl, Matthew J. Anderson, Yeng Ang, Davide Antonello, Pavana Anur, Samuel Aparício, Elizabeth L. Appelbaum, Yasuhito Arai, Axel Aretz, Koji Arihiro, Shun‐ichi Ariizumi, Joshua Armenia, Laurent Arnould, L. Sylvia, Yassen Assenov, Gurnit Atwal and 1,284 more - Nature 2020 cited by 3,816
- Comprehensive and Integrative Genomic Characterization of Hepatocellular Carcinoma
Authors: Adrian Ally, Miruna Balasundaram, Rebecca Carlsen, Eric Chuah, Amanda Clarke, Noreen Dhalla, Robert A. Holt, Steven J.M. Jones, Darlene Lee, Yussanne Ma, Marco A. Marra, Michael Mayo, Richard A. Moore, Andrew J. Mungall, Jacqueline E. Schein, Payal Sipahimalani, Angela Tam, Nina Thiessen, Dorothy Cheung, Tina Wong, Denise Brooks, A. Gordon Robertson, Reanne Bowlby, Karen Mungall, Sara Sadeghi, Xi Liu, Kyle R. Covington, Eve Shinbrot, David A. Wheeler, Richard A. Gibbs, Lawrence A. Donehower, Linghua Wang, Jay Bowen, Julie M. Gastier‐Foster, Mark Gerken, Carmen Helsel, Kristen Leraas, Tara M. Lichtenberg, Nilsa C. Ramirez, Lisa Wise, Erik Zmuda, Stacey Gabriel, Matthew Meyerson, Carrie Cibulskis, Bradley A. Murray, Juliann Shih, Rameen Beroukhim, Andrew D. Cherniack, Steven E. Schumacher, Gordon Saksena, Chandra Sekhar Pedamallu, Lynda Chin, Gad Getz, Michael S. Noble, Hailei Zhang, David I. Heiman, Juok Cho, Nils Gehlenborg, Gordon Saksena, Douglas Voet, Pei Lin, Scott Frazer, Timothy Defreitas, Sam Meier, Michael S. Lawrence, Jaegil Kim, Chad J. Creighton, Donna M. Muzny, HarshaVardhan Doddapaneni, Hai Hu, Min Wang, Donna Morton, Viktoriya Korchina, Yi Han, Huyen Dinh, Lora Lewis, Michelle Bellair, Xiuping Liu, Jireh Santibanez, Robert Glenn, Sandra Lee, Walker Hale, Joel S. Parker, Matthew D. Wilkerson, D. Neil Hayes, Sheila M. Reynolds, Ilya Shmulevich, Wei Zhang, Yuexin Liu, Lisa Iype, Hala R. Makhlouf, Michael Torbenson, Sanjay Kakar, Matthew M. Yeh, Dhanpat Jain, David E. Kleiner, Dhanpat Jain, Renumathy Dhanasekaran, Hashem B. El‐Serag, Sun Young Yim and 138 more - Cell 2017 cited by 2,591
- Integrated Genomic Characterization of Papillary Thyroid Carcinoma
Authors: Nishant Agrawal, Rehan Akbani, Bülent Arman Aksoy, Adrian Ally, Harindra Arachchi, L. Sylvia, J. Todd Auman, Miruna Balasundaram, Saianand Balu, Stephen B. Baylin, Madhusmita Behera, Brady Bernard, Rameen Beroukhim, Justin A. Bishop, Aaron D. Black, Tom Bodenheimer, Lori Boice, Moiz S. Bootwalla, Jay Bowen, Reanne Bowlby, Christopher A. Bristow, Robin Brookens, Denise Brooks, Robert Bryant, Elizabeth Buda, Yaron S.N. Butterfield, Tobias Carling, Rebecca Carlsen, Scott L. Carter, Sally E. Carty, Timothy A. Chan, Amy Y. Chen, Andrew D. Cherniack, Dorothy Cheung, Lynda Chin, Juok Cho, Andy Chu, Eric Chuah, Kristian Cibulskis, Giovanni Ciriello, Amanda Clarke, Gary L. Clayman, Leslie Cope, John A. Copland, Kyle R. Covington, Ludmila Danilova, Tanja M. Davidsen, John A. Demchok, Daniel DiCara, Noreen Dhalla, Rajiv Dhir, Sheliann S. Dookran, Gideon Dresdner, Jonathan Eldridge, Greg Eley, Adel K. El‐Naggar, Stephanie Eng, James A. Fagin, Timothy R. Fennell, Robert L. Ferris, Sheila Fisher, Scott Frazer, Jessica Frick, Stacey Gabriel, Ian Ganly, Jianjiong Gao, Levi A. Garraway, Julie M. Gastier-Foster, Gad Getz, Nils Gehlenborg, Ronald Ghossein, Richard A. Gibbs, Thomas J. Giordano, Karen Gomez-Hernandez, Jonna Grimsby, Benjamin Groß, Ranabir Guin, Angela Hadjipanayis, Hollie A. Harper, D. Neil Hayes, David I. Heiman, James G. Herman, Katherine A. Hoadley, Matan Hofree, Robert A. Holt, Alan P. Hoyle, Franklin W. Huang, Mei Huang, Carolyn M. Hutter, Trey Ideker, Lisa Iype, Anders Jacobsen, Stuart R. Jefferys, Corbin D. Jones, Steven J.M. Jones, Katayoon Kasaian, Electron Kebebew, Fadlo R. Khuri, Jaegil Kim, Roger Kramer and 143 more - Cell 2014 cited by 3,126
- Comprehensive Genomic Analysis Identifies Novel Subtypes and Targets of Triple-Negative Breast Cancer
Authors: Matthew D. Burstein, Anna Tsimelzon, Graham M. Poage, Kyle R. Covington, Alejandro Contreras, Suzanne A.W. Fuqua, Michelle I. Savage, C. Kent Osborne, Susan G. Hilsenbeck, Jenny C. Chang, Gordon B. Mills, Ching C. Lau, Powel H. Brown - Clinical Cancer Research 2014 cited by 1,385
- Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines
Authors: Kyle Ellrott, Matthew H. Bailey, Gordon Saksena, Kyle R. Covington, Cyriac Kandoth, Chip Stewart, Julian M. Hess, Singer Ma, Kami Chiotti, Michael D. McLellan, Heidi J. Sofia, Carolyn Hutter, Gad Getz, David A. Wheeler, Li Ding, Rory Johnson, John A. Demchok, Ina Felau, Melpomeni Kasapi, Martin L. Ferguson, Carolyn M. Hutter, Heidi J. Sofia, Roy Tarnuzzer, Zhining Wang, Liming Yang, Jean C. Zenklusen, Jiashan Zhang, Sudha Chudamani, Jia Liu, Laxmi Lolla, Rashi Naresh, Todd Pihl, Qiang Sun, Yunhu Wan, Ye Wu, Juok Cho, Timothy Defreitas, Scott Frazer, Nils Gehlenborg, Gad Getz, David I. Heiman, Jaegil Kim, Michael S. Lawrence, Pei Lin, Sam Meier, Michael S. Noble, Gordon Saksena, Doug Voet, Hailei Zhang, Brady Bernard, Nyasha Chambwe, Varsha Dhankani, Theo Knijnenburg, Roger Kramer, Kalle Leinonen, Yuexin Liu, Michael I. Miller, Sheila M. Reynolds, Ilya Shmulevich, Vésteinn Thórsson, Wei Zhang, Rehan Akbani, Bradley M. Broom, Apurva M. Hegde, Zhenlin Ju, Rupa S. Kanchi, Anil Korkut, Jun Li, Han Liang, Shiyun Ling, Wenbin Liu, Yiling Lu, Gordon B. Mills, Kwok-Shing Ng, Arvind Rao, Michaël Ryan, Jing Wang, John N. Weinstein, Jiexin Zhang, Adam Abeshouse, Joshua Armenia, Debyani Chakravarty, Walid K. Chatila, Ino de Bruijn, Galen F. Gao, Benjamin E. Gross, Zachary Heins, Ritika Kundra, Konnor La, Marc Ladanyi, Augustin Luna, Moriah G. Nissan, Angelica Ochoa, Sarah Phillips, Ed Reznik, Francisco Sánchez-Vega, Chris Sander, Nikolaus Schultz, Robert P. Sheridan, S. Onur Sumer and 640 more - Cell Systems 2018 cited by 942
- The Repertoire of Mutational Signatures in Human Cancer
Authors: Ludmil B. Alexandrov, Jaegil Kim, Nicholas J. Haradhvala, Mi Ni Huang, Alvin Wei Tian Ng, Yang Wu, Arnoud Boot, Kyle R. Covington, Dmitry A. Gordenin, Erik N. Bergstrom, S. M. Ashiqul Islam, Núria López-Bigas, Leszek J. Klimczak, John R. McPherson, Sandro Morganella, Radhakrishnan Sabarinathan, David A. Wheeler, Ville Mustonen, the PCAWG Mutational Signatures Working Group, Gad Getz, Steve Rozen, Michael R. Stratton - 2018 cited by 549
- Integrative Genomic Analysis of Cholangiocarcinoma Identifies Distinct IDH-Mutant Molecular Profiles
Authors: Farshad Farshidfar, Siyuan Zheng, Marie‐Claude Gingras, Yulia Newton, Juliann Shih, A. Gordon Robertson, Toshinori Hinoue, Katherine A. Hoadley, Ewan A. Gibb, Jason Roszik, Kyle R. Covington, Chia-Chin Wu, Eve Shinbrot, Nicolas Stransky, Apurva M. Hegde, Ju Dong Yang, Ed Reznik, Sara Sadeghi, Chandra Sekhar Pedamallu, Akinyemi I. Ojesina, Julian M. Hess, J. Todd Auman, Suhn K. Rhie, Reanne Bowlby, Mitesh J. Borad, Rehan Akbani, Loretta K. Allotey, Adrian Ally, Domenico Alvaro, Jesper B. Andersen, Elizabeth L. Appelbaum, Arshi Arora, J. Todd Auman, Miruna Balasundaram, Saianand Balu, Nabeel Bardeesy, Oliver F. Bathe, Stephen B. Baylin, Rameen Beroukhim, Mario Berríos, Tom Bodenheimer, Lori Boice, Moiz S. Bootwalla, Mitesh J. Borad, Jay Bowen, Reanne Bowlby, Maria Consiglia Bragazzi, Denise Brooks, Vincenzo Cardinale, Rebecca Carlsen, Guido Carpino, André Lopes Carvalho, Roongruedee Chaiteerakij, Vishal C. Chandan, Andrew D. Cherniack, Lynda Chin, Juok Cho, Gina Choe, Eric Chuah, Sudha Chudamani, Carrie Cibulskis, Matthew G. Cordes, Kyle R. Covington, Daniel Crain, Erin Curley, Agostino Maria De Rose, Timothy Defreitas, John A. Demchok, Vikram Deshpande, Noreen Dhalla, Li Ding, Kimberley Evason, Farshad Farshidfar, Ina Felau, Martin L. Ferguson, Wai Chin Foo, Antonio Franchitto, Scott Frazer, Catrina C. Fronick, Lucinda A. Fulton, Robert S. Fulton, Stacey Gabriel, Johanna Gardner, Julie M. Gastier‐Foster, Eugenio Gaudio, Nils Gehlenborg, Giannicola Genovese, Mark Gerken, Gad Getz, Nasra H. Giama, Richard A. Gibbs, Marie-Claude Gingras, Felice Giuliante, Gian Luca Grazi, D. Neil Hayes, Apurva M. Hegde, David I. Heiman, Julian M. Hess, Toshinori Hinoue, Katherine A. Hoadley and 136 more - Cell Reports 2017 cited by 612
- Mutational Strand Asymmetries in Cancer Genomes Reveal Mechanisms of DNA Damage and Repair
Authors: Nicholas J. Haradhvala, Paz Polak, Petar Stojanov, Kyle R. Covington, Eve Shinbrot, Julian M. Hess, Esther Rheinbay, Jaegil Kim, Yosef E. Maruvka, Lior Z. Braunstein, Atanas Kamburov, Philip C. Hanawalt, David A. Wheeler, Amnon Koren, Michael S. Lawrence, Gad Getz - Cell 2016 cited by 452
- Trans-ancestry mutational landscape of hepatocellular carcinoma genomes
Authors: Yasushi Totoki, Kenji Tatsuno, Kyle R. Covington, Hiroki Ueda, Chad J. Creighton, Mamoru Kato, Shingo Tsuji, Lawrence A. Donehower, Betty L. Slagle, Hiromi Nakamura, Shogo Yamamoto, Eve Shinbrot, Natsuko Hama, Megan Lehmkuhl, Fumie Hosoda, Yasuhito Arai, Kim Walker, Mahmoud Dahdouli, Kengo Gotoh, Genta Nagae, Marie‐Claude Gingras, Donna M. Muzny, Hidenori Ojima, Kazuaki Shimada, Yutaka Midorikawa, John A. Goss, Ronald T. Cotton, Akimasa Hayashi, Junji Shibahara, Shumpei Ishikawa, Jacfranz J. Guiteau, Mariko Tanaka, Tomoko Urushidate, Shoko Ohashi, Naoko Okada, HarshaVardhan Doddapaneni, Min Wang, Yiming Zhu, Huyen Dinh, Takuji Okusaka, Norihiro Kokudo, Tomoo Kosuge, Tadatoshi Takayama, Masashi Fukayama, Richard A. Gibbs, David A. Wheeler, Hiroyuki Aburatani, Tatsuhiro Shibata - Nature Genetics 2014 cited by 779
- Integrated Molecular Characterization of Testicular Germ Cell Tumors
Authors: Hui Shen, Juliann Shih, Daniel P. Hollern, Linghua Wang, Reanne Bowlby, Satish K. Tickoo, Vésteinn Thórsson, Andrew J. Mungall, Yulia Newton, Apurva M. Hegde, Joshua Armenia, Francisco Sánchez-Vega, John Pluta, Louise C. Pyle, Rohit Mehra, Victor E. Reuter, Guilherme Godoy, Jeffrey Jones, Carl Simon Shelley, Darren R. Feldman, Daniel Onofre Vidal, Davor Lessel, Tomislav Kuliš, Flavio Mavignier Cárcano, Kristen Leraas, Tara M. Lichtenberg, Denise Brooks, Andrew D. Cherniack, Juok Cho, David I. Heiman, Katayoon Kasaian, Minwei Liu, Michael S. Noble, Xi Liu, Hailei Zhang, Wanding Zhou, Jean C. Zenklusen, Carolyn M. Hutter, Ina Felau, Jiashan Zhang, Nikolaus Schultz, Gad Getz, Matthew Meyerson, Joshua M. Stuart, Linghua Wang, Xi Liu, David A. Wheeler, Daniel Hughes, Kyle R. Covington, Joy C. Jayaseelan, Viktoriya Korchina, Lora Lewis, Hai Hu, HarshaVardhan Doddapaneni, Donna M. Muzny, Richard A. Gibbs, Katherine A. Hoadley, Daniel P. Hollern, Benjamin G. Vincent, Shengjie Chai, Christof C. Smith, J. Todd Auman, Yan Shi, Shaowu Meng, Tara Skelly, Donghui Tan, Umadevi Veluvolu, Piotr A. Mieczkowski, Corbin D. Jones, Matthew D. Wilkerson, Saianand Balu, Tom Bodenheimer, Alan P. Hoyle, Stuart R. Jefferys, Lisle E. Mose, Janae V. Simons, Matthew G. Soloway, Jeffrey Roach, Joel S. Parker, D. Neil Hayes, Charles M. Perou, Juliann Shih, Andrew D. Cherniack, Matthew Meyerson, Gordon Saksena, Carrie Cibulskis, Steven E. Schumacher, Rameen Beroukhim, Stacey Gabriel, Reanne Bowlby, Andrew J. Mungall, Denise Brooks, Katayoon Kasaian, Adrian Ally, Miruna Balasundaram, Rebecca Carlsen, Dorothy Cheung, Eric Chuah, Noreen Dhalla, Robert A. Holt and 141 more - Cell Reports 2018 cited by 460
- Mutational Landscape of Aggressive Cutaneous Squamous Cell Carcinoma
Authors: Curtis R. Pickering, Jane H. Zhou, J. Jack Lee, Jennifer Drummond, S. Andrew Peng, Rami Saade, Kenneth Y. Tsai, Jonathan L. Curry, Michael T. Tetzlaff, Stephen Y. Lai, Jun Yu, Donna M. Muzny, HarshaVardhan Doddapaneni, Eve Shinbrot, Kyle R. Covington, Jianhua Zhang, Sahil Seth, Carlos Caulı́n, Gary L. Clayman, Adel K. El‐Naggar, Richard A. Gibbs, Randal S. Weber, Jeffrey N. Myers, David A. Wheeler, Mitchell J. Frederick - Clinical Cancer Research 2014 cited by 607
- Chemistry-First Approach for Nomination of Personalized Treatment in Lung Cancer
Authors: Elizabeth A. McMillan, Myung‐Jeom Ryu, Caroline H. Diep, Saurabh Mendiratta, Jean R. Clemenceau, Rachel M. Vaden, Ju-Hwa Kim, Takashi Motoyaji, Kyle R. Covington, Michael Peyton, Kenneth E. Huffman, Xiaofeng Wu, Luc Girard, Yeojin Sung, Pei-Hsaun Chen, Prema L. Mallipeddi, Joo Young Lee, Jordan Hanson, Sukesh Voruganti, Yunku Yu, Sunho Park, Jessica Sudderth, Christopher DeSevo, Donna M. Muzny, HarshaVardhan Doddapaneni, Adi Gazdar, Richard A. Gibbs, TaeHyun Hwang, John V. Heymach, Ignacio I. Wistuba, Kevin R. Coombes, Noelle S. Williams, David A. Wheeler, John B. MacMillan, Ralph J. DeBerardinis, Michael G. Roth, Bruce A. Posner, John D. Minna, Hyun Seok Kim, Michael A. White - Cell 2018 cited by 150
- Mutually exclusive recurrent somatic mutations in MAP2K1 and BRAF support a central role for ERK activation in LCH pathogenesis
Authors: Rikhia Chakraborty, Oliver Hampton, Xiaoyun Shen, Stephen J. Simko, Albert J. Shih, Harshal Abhyankar, Karen Phaik Har Lim, Kyle R. Covington, Lisa R. Treviño, Ninad Dewal, Donna M. Muzny, HarshaVardhan Doddapaneni, Hai Hu, Linghua Wang, Philip J. Lupo, John Hicks, Diana L. Bonilla, Karen C. Dwyer, Marie‐Luise Berres, Poulikos I. Poulikakos, Miriam Mérad, Kenneth L. McClain, David A. Wheeler, Carl E. Allen, D. Williams Parsons - Blood 2014 cited by 426
- Multilevel Genomics-Based Taxonomy of Renal Cell Carcinoma
Authors: Fengju Chen, Yiqun Zhang, Yasin Şenbabaoğlu, Giovanni Ciriello, Lixing Yang, Ed Reznik, Brian Shuch, Goran Micevic, Guillermo de Velasco, Eve Shinbrot, Michael S. Noble, Yiling Lu, Kyle R. Covington, Xi Liu, Jennifer Drummond, Donna M. Muzny, Hyojin Kang, Junehawk Lee, Pheroze Tamboli, Victor E. Reuter, Carl Simon Shelley, Benny Abraham Kaipparettu, Donald P. Bottaro, Andrew K. Godwin, Richard A. Gibbs, Gad Getz, Raju Kucherlapati, Peter J. Park, Chris Sander, Elizabeth P. Henske, Jane H. Zhou, David J. Kwiatkowski, Thai H. Ho, Toni K. Choueiri, James J. Hsieh, Rehan Akbani, Gordon B. Mills, A. Ari Hakimi, David A. Wheeler, Chad J. Creighton - Cell Reports 2016 cited by 381
- APOBEC mutation drives early-onset squamous cell carcinomas in recessive dystrophic epidermolysis bullosa
Authors: Raymond J. Cho, Ludmil B. Alexandrov, Nicoline Y. den Breems, Velina S. Atanasova, Mehdi Farshchian, Elizabeth Purdom, Tran Nguyen, Cristian Coarfa, Kimal Rajapakshe, Marco di Prisco, Joya Sahu, Patrick Tassone, Evan J. Greenawalt, Eric A. Collisson, Wei Wu, Hui Yao, Xiaoping Su, Christina Guttmann‐Gruber, Josefina Piñón Hofbauer, Raabia Hashmi, Ignacia Fuentes, Stephen C. Benz, Justin Golovato, Erik A. Ehli, Christel M. Davis, Gareth E. Davies, Kyle R. Covington, Dédée F. Murrell, Julio C. Salas‐Alanís, Francis Palisson, Anna L. Bruckner, William A. Robinson, Cristina Has, Leena Bruckner‐Tuderman, Matthias Titeux, Marcel F. Jonkman, Ellie Rashidghamat, Su M. Lwin, Jemima E. Mellerio, John A. McGrath, Johann Bauer, Alain Hovnanian, Kenneth Y. Tsai, Andrew P. South - Science Translational Medicine 2018 cited by 132
- Exonuclease mutations in DNA polymerase epsilon reveal replication strand specific mutation patterns and human origins of replication
Authors: Eve Shinbrot, Erin E. Henninger, Nils Weinhold, Kyle R. Covington, A. Yasemin Göksenin, Nikolaus Schultz, Hsu Chao, HarshaVardhan Doddapaneni, Donna M. Muzny, Richard A. Gibbs, Chris Sander, Zachary F. Pursell, David A. Wheeler - Genome Research 2014 cited by 294
- Integrating 31-Gene Expression Profiling With Clinicopathologic Features to Optimize Cutaneous Melanoma Sentinel Lymph Node Metastasis Prediction
Authors: Eric D. Whitman, Vadim P. Koshenkov, Brian Gastman, Deri Lewis, Eddy C. Hsueh, Ho Pak, Thomas P. Trezona, Robert S. Davidson, Michael McPhee, J. Michael Guenther, Paul Toomey, Franz O. Smith, Peter D. Beitsch, James M. Lewis, Andrew Ward, Shawn E. Young, Parth Shah, Ann P. Quick, Brian J. Martin, Olga Zolochevska, Kyle R. Covington, Federico A. Monzon, Matthew S. Goldberg, Robert W. Cook, Martin D. Fleming, David M. Hyams, John T. Vetto - JCO Precision Oncology 2021 cited by 58
- Cross-species identification of genomic drivers of squamous cell carcinoma development across preneoplastic intermediates
Authors: Vida Chitsazzadeh, Cristian Coarfa, Jennifer Drummond, Tri Minh Nguyen, Aaron K. Joseph, Suneel Chilukuri, Elizabeth Charpiot, Charles H. Adelmann, Grace Ching, Tran Nguyen, Courtney Nicholas, Valencia D. Thomas, Michael R. Migden, Deborah F. MacFarlane, Erika J. Thompson, Jianjun Shen, Yoko Takata, Kayla McNiece, M. Polansky, Hussein A. Abbas, Kimal Rajapakshe, Adam C. Gower, Avrum Spira, Kyle R. Covington, Weimin Xiao, Preethi H. Gunaratne, Curtis R. Pickering, Mitchell J. Frederick, Jeffrey N. Myers, Li Shen, Hui Yao, Xiaoping Su, Ronald P. Rapini, David A. Wheeler, Ernest T. Hawk, Elsa R. Flores, Kenneth Y. Tsai - Nature Communications 2016 cited by 159
- Validation of a 40-gene expression profile test to predict metastatic risk in localized high-risk cutaneous squamous cell carcinoma
Authors: Ashley Wysong, Jason G. Newman, Kyle R. Covington, Sarah J. Kurley, Sherrif F. Ibrahim, Aaron S. Farberg, Anna Bar, Nathan Cleaver, Ally-Khan Somani, David Panther, David G. Brodland, John A. Zitelli, Jennifer Toyohara, Ian A. Maher, Yang Xia, Kristin Bibee, Robert D. Griego, Darrell S. Rigel, Kristen M. Plasseraud, Sarah Estrada, Lauren Meldi Sholl, Clare Johnson, Robert W. Cook, Chrysalyne D. Schmults, Sarah T. Arron - Journal of the American Academy of Dermatology 2020 cited by 91
- Genomic profiling of Sézary syndrome identifies alterations of key T cell signaling and differentiation genes
Authors: Linghua Wang, Xiao Ni, Kyle R. Covington, Betty Yang, Jessica Shiu, Xiang Zhang, Xi Liu, Qingchang Meng, Timothy Langridge, Jennifer Drummond, Lawrence A. Donehower, HarshaVardhan Doddapaneni, Donna M. Muzny, Richard A. Gibbs, David A. Wheeler, Madeleine Duvic - Nature Genetics 2015 cited by 323
- Molecular risk prediction in cutaneous melanoma: A meta-analysis of the 31-gene expression profile prognostic test in 1,479 patients
Authors: Bradley N. Greenhaw, Kyle R. Covington, Sarah J. Kurley, Yıldıray Yeniay, Nhat Anh Cao, Kristen M. Plasseraud, Robert W. Cook, Eddy C. Hsueh, Brian Gastman, Maria L. Wei - Journal of the American Academy of Dermatology 2020 cited by 81
- 31-Gene Expression Profile Testing in Cutaneous Melanoma and Survival Outcomes in a Population-Based Analysis: A SEER Collaboration
Authors: Christine N. Bailey, Brian Martin, Valentina I. Petkov, Nicola Schussler, Jennifer L. Stevens, Suzanne Bentler, Rosemary D. Cress, Jennifer A. Doherty, Eric B. Durbin, Scarlett Lin Gomez, Lou Gonsalves, Brenda Y. Hernandez, Lihua Liu, Bożena M Morawski, Maria J. Schymura, Stephen M. Schwartz, Kevin C. Ward, Charles L. Wiggins, Xiao‐Cheng Wu, Matthew S. Goldberg, Jennifer J. Siegel, Robert W. Cook, Kyle R. Covington, Sarah J. Kurley - JCO Precision Oncology 2023 cited by 37
- Performance of a prognostic 31-gene expression profile in an independent cohort of 523 cutaneous melanoma patients
Authors: Jonathan S. Zager, Brian Gastman, Sancy A. Leachman, René González, Martin D. Fleming, Laura K. Ferris, Jonhan Ho, Alexander R. Miller, Robert W. Cook, Kyle R. Covington, Kristen Meldi-Plasseraud, Brooke Middlebrook, Lewis H. Kaminester, Anthony Greisinger, Sarah Estrada, David M. Pariser, Lee D. Cranmer, Jane L. Messina, John T. Vetto, Jeffrey D. Wayne, Keith A. Delman, David H. Lawson, Pedram Gerami - BMC Cancer 2018 cited by 142
- Long-Term Outcomes in a Multicenter, Prospective Cohort Evaluating the Prognostic 31-Gene Expression Profile for Cutaneous Melanoma
Authors: Eddy C. Hsueh, James R. DeBloom, Jonathan H. Lee, Jeffrey J. Sussman, Kyle R. Covington, Hillary G. Caruso, Ann P. Quick, Robert W. Cook, Craig L. Slingluff, Kelly M. McMasters - JCO Precision Oncology 2021 cited by 45
