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Shankar Subramaniam

Active 1989–2025

166
Papers
27,899
Citations
82
h-index
138
i10-index

Citations

Citations per year for Shankar Subramaniam1987: 1 citations1990: 1 citations1991: 3 citations1992: 2 citations1993: 9 citations1994: 3 citations1995: 12 citations1996: 17 citations1997: 14 citations1998: 19 citations1999: 20 citations2000: 34 citations2001: 24 citations2002: 30 citations2003: 51 citations2004: 74 citations2005: 99 citations2006: 168 citations2007: 191 citations2008: 219 citations2009: 213 citations2010: 243 citations2011: 324 citations2012: 267 citations2013: 316 citations2014: 291 citations2015: 275 citations2016: 256 citations2017: 324 citations2018: 327 citations2019: 917 citations2020: 945 citations2021: 1,146 citations2022: 908 citations2023: 710 citations2024: 1,105 citations2025: 621 citations2026: 27 citations1988–1989: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,936 citing papers, 27.7% of this breakdownChina: 1,561 citing papers, 11% of this breakdownUnited Kingdom: 904 citing papers, 6.4% of this breakdownGermany: 884 citing papers, 6.2% of this breakdownItaly: 496 citing papers, 3.5% of this breakdownCanada: 469 citing papers, 3.3% of this breakdownFrance: 456 citing papers, 3.2% of this breakdownNetherlands: 427 citing papers, 3% of this breakdownAustralia: 418 citing papers, 2.9% of this breakdownJapan: 357 citing papers, 2.5% of this breakdownSpain: 337 citing papers, 2.4% of this breakdownSwitzerland: 255 citing papers, 1.8% of this breakdown
0%27.7%Other 26.1%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology52.2%
  • Medicine25.1%
  • Immunology and Microbiology7.5%
  • Chemistry2.8%
  • Computer Science2.2%
  • Neuroscience2.1%
  • Other8.1%

Topics

  • Metabolomics and Mass Spectrometry Studies6.3%
  • Bioinformatics and Genomic Networks2.3%
  • Mass Spectrometry Techniques and Applications2%
  • Lipid Membrane Structure and Behavior1.8%
  • Advanced Proteomics Techniques and Applications1.6%
  • Liver Disease Diagnosis and Treatment1.5%
  • Other84.5%

Coauthors

All papers

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  1. Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools

    Authors: Manish Sud, Eoin Fahy, Dawn Cotter, Kenan Azam, Ilango Vadivelu, Charles F. Burant, Arthur Edison, Oliver Fiehn, Richard M. Higashi, K. Sreekumaran Nair, Susan Sumner, Shankar Subramaniam - Nucleic Acids Research, Nucleic Acids Res. 2015 cited by 962

  2. Update on LIPID MAPS classification, nomenclature, and shorthand notation for MS-derived lipid structures

    Authors: Gerhard Liebisch, Eoin Fahy, Junken Aoki, Edward A. Dennis, Thierry Durand, Christer S. Ejsing, Maria Fedorova, Ivo Feußner, William J. Griffiths, Harald Köfeler, Alfred H. Merrill, Robert C. Murphy, Valerie B. O’Donnell, Olga Oskolkova, Shankar Subramaniam, Michael J.O. Wakelam, Friedrich Spener - Journal of Lipid Research 2020 cited by 872

  3. Skeletal muscle: A review of molecular structure and function, in health and disease

    Authors: Kavitha Mukund, Shankar Subramaniam - WIREs Systems Biology and Medicine 2019 cited by 626

  4. Update of the LIPID MAPS comprehensive classification system for lipids

    Authors: Eoin Fahy, Shankar Subramaniam, Robert C. Murphy, Masahiro Nishijima, Christian R.H. Raetz, Takao Shimizu, Friedrich Spener, Gerrit van Meer, Michael J.O. Wakelam, Edward A. Dennis - Journal of Lipid Research 2008 cited by 1,787

  5. LMSD: LIPID MAPS structure database

    Authors: Manish Sud, Eoin Fahy, David Cotter, Andrew J. Brown, Edward A. Dennis, Christopher K. Glass, Alfred H. Merrill, Robert C. Murphy, Christian R.H. Raetz, David W. Russell, Shankar Subramaniam - Nucleic Acids Research, Nucleic Acids Res. 2006 cited by 1,385

  6. Lipidomics reveals a remarkable diversity of lipids in human plasma

    Authors: Oswald Quehenberger, Aaron M. Armando, Alex Brown, Stephen Milne, David S. Myers, Alfred H. Merrill, Sibali Bandyopadhyay, Kristin N. Jones, Samuel Kelly, Rebecca L. Shaner, Cameron Sullards, Elaine Wang, Robert C. Murphy, Robert M. Barkley, Thomas J. Leiker, Christian R.H. Raetz, Ziqiang Guan, Gregory M. Laird, David A. Six, David W. Russell, Jeffrey G. McDonald, Shankar Subramaniam, Eoin Fahy, Edward A. Dennis - Journal of Lipid Research 2010 cited by 1,349

  7. The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination

    Authors: Florian Wimmers, Michele Donato, Alex Kuo, Tal Ashuach, Shakti Gupta, Chunfeng Li, Mai Dvorak, Mariko H. Foecke, Sarah E. Chang, Thomas Hagan, Sanne E. De Jong, Holden T. Maecker, Robbert van der Most, Peggie Cheung, Mario Cortese, Steven E. Bosinger, Mark M. Davis, Nadine Rouphael, Shankar Subramaniam, Nir Yosef, Paul J. Utz, Purvesh Khatri, Bali Pulendran - Cell 2021 cited by 287

  8. Lipid classification, structures and tools

    Authors: Eoin Fahy, Dawn Cotter, Manish Sud, Shankar Subramaniam - Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids 2011 cited by 624

  9. LIPID MAPS: update to databases and tools for the lipidomics community

    Authors: M.J. Conroy, Robert Andrews, Simon Andrews, Lauren Cockayne, Edward A. Dennis, Eoin Fahy, Caroline Gaud, William J. Griffiths, Geoff Jukes, Maxim Kolchin, Karla Mendivelso, Andrea F. Lopez‐Clavijo, Caroline Ready, Shankar Subramaniam, Valerie B. O’Donnell - Nucleic Acids Research 2023 cited by 284

  10. LIPID MAPS online tools for lipid research

    Authors: Eoin Fahy, Manish Sud, Dawn Cotter, Shankar Subramaniam - Nucleic Acids Research, Nucleic Acids Res. 2007 cited by 932

  11. Adjuvanting a subunit COVID-19 vaccine to induce protective immunity

    Authors: Prabhu S. Arunachalam, Alexandra C. Walls, Nadia Golden, Caroline Atyeo, Stephanie Fischinger, Chunfeng Li, Pyone P. Aye, Mary Jane Navarro, Lilin Lai, Venkata Viswanadh Edara, Katharina Röltgen, Kenneth A. Rogers, Lisa Shirreff, Douglas E. Ferrell, Samuel Wrenn, Deleah Pettie, John C. Kraft, Marcos C. Miranda, Elizabeth Kepl, Claire Sydeman, Natalie Brunette, Michael Murphy, Brooke Fiala, Lauren Carter, Alexander G. White, Meera Trisal, Ching‐Lin Hsieh, Kasi Russell‐Lodrigue, Christopher Monjure, Jason Dufour, Skye Spencer, Lara Doyle‐Meyers, Rudolph P. Bohm, Nicholas J. Maness, Chad J. Roy, Jessica A. Plante, Kenneth S. Plante, Alex Zhu, Matthew J. Gorman, Sally Shin, Xiaoying Shen, Jane Fontenot, Shakti Gupta, Derek T. O’Hagan, Robbert van der Most, Rino Rappuoli, Robert L. Coffman, David Novack, Jason S. McLellan, Shankar Subramaniam, David C. Montefiori, Scott D. Boyd, JoAnne L. Flynn, Galit Alter, François Villinger, Harry Kleanthous, Jay Rappaport, Mehul S. Suthar, Neil P. King, David Veesler, Bali Pulendran - Nature 2021 cited by 353

  12. Regulated Accumulation of Desmosterol Integrates Macrophage Lipid Metabolism and Inflammatory Responses

    Authors: Nathanael J. Spann, Lana X. Garmire, Jeffrey G. McDonald, David S. Myers, Stephen Milne, Norihito Shibata, Donna Reichart, Jesse N. Fox, Iftach Shaked, Daniel Heudobler, Christian R.H. Raetz, Elaine W. Wang, Samuel Kelly, M. Cameron Sullards, Robert Cushman Murphy, Alfred H. Merrill, Heather A. Brown, Edward A. Dennis, Andrew C. Li, Klaus Ley, Sotirios Tsimikas, Eoin Fahy, Shankar Subramaniam, Oswald Quehenberger, David W. Russell, Christopher K. Glass - Cell 2012 cited by 604

  13. p62, Upregulated during Preneoplasia, Induces Hepatocellular Carcinogenesis by Maintaining Survival of Stressed HCC-Initiating Cells

    Authors: Atsushi Umemura, Feng He, Koji Taniguchi, Hayato Nakagawa, Shinichiro Yamachika, Joan Font-Burgada, Zhenyu Zhong, Shankar Subramaniam, Sindhu Raghunandan, Ángeles Durán, Juan F. Linares, Miguel Reina‐Campos, Shiori Umemura, Mark A. Valasek, Ekihiro Seki, Kanji Yamaguchi, Kazuhiko Koike, Yoshito Itoh, María T. Diaz‐Meco, Jorge Moscat, Michael Karin - Cancer Cell 2016 cited by 458

  14. AMPK promotes mitochondrial biogenesis and function by phosphorylating the epigenetic factors DNMT1, RBBP7, and HAT1

    Authors: Traci Marin, Brendan Gongol, Fan Zhang, Marcy Martin, David A. Johnson, Han Xiao, Yinsheng Wang, Shankar Subramaniam, Shu Chien, John Y.-J. Shyy - Science Signaling 2017 cited by 255

  15. SREBP signaling is essential for effective B cell responses

    Authors: Wei Luo, Julia Z. Adamska, Chunfeng Li, Rohit Verma, Qing Liu, Thomas Hagan, Florian Wimmers, Shakti Gupta, Yupeng Feng, Wenxia Jiang, Jiehao Zhou, Erika V. Valore, Yanli Wang, Meera Trisal, Shankar Subramaniam, Timothy F. Osborne, Bali Pulendran - Nature Immunology 2022 cited by 71

  16. Biomarkers of NAFLD progression: a lipidomics approach to an epidemic

    Authors: D. Lee Gorden, David S. Myers, Pavlina T. Ivanova, Eoin Fahy, Mano R. Maurya, Shakti Gupta, Jun Min, Nathanael J. Spann, Jeffrey G. McDonald, Samuel Kelly, Jingjing Duan, M. Cameron Sullards, Thomas J. Leiker, Robert M. Barkley, Oswald Quehenberger, Aaron M. Armando, Stephen Milne, Thomas P. Mathews, Michelle D. Armstrong, Chijun Li, Willie Melvin, Ronald H. Clements, M. Kay Washington, Alisha M. Mendonsa, Joseph L. Witztum, Ziqiang Guan, Christopher K. Glass, Robert C. Murphy, Edward A. Dennis, Alfred H. Merrill, David W. Russell, Shankar Subramaniam, H. Alex Brown - Journal of Lipid Research 2015 cited by 371

  17. RefMet: a reference nomenclature for metabolomics

    Authors: Eoin Fahy, Shankar Subramaniam - Nature Methods 2020 cited by 139

  18. GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser

    Authors: Daniel Petras, Vanessa V. Phelan, Deepa Acharya, Andrew E. Allen, Allegra T. Aron, Nuno Bandeira, Benjamin P. Bowen, Deirdre Belle‐Oudry, Simon Boecker, Dale A. Cummings, Jessica M. Deutsch, Eoin Fahy, Neha Garg, Rachel Gregor, Jo Handelsman, Mirtha Navarro-Hoyos, Alan K. Jarmusch, Scott A. Jarmusch, Katherine Louie, Katherine N. Maloney, Michael T. Marty, Michaël M. Meijler, Itzhak Mizrahi, Rachel L. Neve, Trent R. Northen, Carlos Molina‐Santiago, Morgan Panitchpakdi, Benjamin Pullman, Aaron W. Puri, Robin Schmid, Shankar Subramaniam, Monica Thukral, Felipe Vásquez-Castro, Pieter C. Dorrestein, Mingxun Wang - Nature Methods 2021 cited by 95

  19. Longitudinal shear stress response in human endothelial cells to atheroprone and atheroprotective conditions

    Authors: Mano R. Maurya, Shakti Gupta, Julie Yi-Shuan Li, Nassim E. Ajami, Zhen Chen, John Y.-J. Shyy, Shu Chien, Shankar Subramaniam - National Academy of Sciences, Proceedings of the National Academy of Sciences 2021 cited by 95

  20. Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures

    Authors: Helder I. Nakaya, Thomas Hagan, Sai Duraisingham, Eva K. Lee, Marcin Kwissa, Nadine Rouphael, Daniela Frasca, Merril Gersten, Aneesh K. Mehta, Renaud Gaujoux, Gui-Mei Li, Shakti Gupta, Rafi Ahmed, Mark J. Mulligan, Shai S. Shen-Orr, Bonnie B. Blomberg, Shankar Subramaniam, Bali Pulendran - Immunity 2015 cited by 345

  21. Metabolic Phenotypes of Response to Vaccination in Humans

    Authors: Shuzhao Li, Nicole Sullivan, Nadine Rouphael, Tianwei Yu, Sophia Banton, Mohan S. Maddur, Megan McCausland, Christopher Chiu, Jennifer Canniff, Sheri Dubey, Ken Liu, ViLinh Tran, Thomas Hagan, Sai Duraisingham, Andreas Wieland, Aneesh K. Mehta, Jennifer A. Whitaker, Shankar Subramaniam, Dean P. Jones, Alessandro Sette, Kalpit A. Vora, Adriana Weinberg, Mark J. Mulligan, Helder I. Nakaya, Myron J. Levin, Rafi Ahmed, Bali Pulendran - Cell 2017 cited by 288

  22. Discovering and linking public omics data sets using the Omics Discovery Index

    Authors: Yasset Pérez‐Riverol, Mingze Bai, Felipe da Veiga Leprevost, Silvano Squizzato, Young Mi Park, Kenneth Haug, Adam Carroll, Dylan Spalding, Justin Paschall, Mingxun Wang, Noemí del‐Toro, Tobias Ternent, Peng Zhang, Nicola Buso, Nuno Bandeira, Eric W. Deutsch, David Campbell, Ronald C. Beavis, Reza M. Salek, Uğis Sarkans, Robert Petryszak, Maria Keays, Eoin Fahy, Manish Sud, Shankar Subramaniam, Ariana Barberá, Rafael C. Jiménez, Alexey I. Nesvizhskii, Susanna‐Assunta Sansone, Christoph Steinbeck, Rodrigo López, Juan Antonio Vizcaíno, Peipei Ping, Henning Hermjakob - Nature Biotechnology 2017 cited by 222

  23. A Mouse Macrophage Lipidome

    Authors: Edward A. Dennis, Raymond A. Deems, Richard Harkewicz, Oswald Quehenberger, H. Alex Brown, Stephen Milne, David S. Myers, Christopher K. Glass, Gary Hardiman, Donna Reichart, Alfred H. Merrill, M. Cameron Sullards, Elaine Wang, Robert C. Murphy, Christian R.H. Raetz, Teresa A. Garrett, Ziqiang Guan, Andrea C. Ryan, David W. Russell, Jeffrey G. McDonald, Bonne M. Thompson, Walter A. Shaw, Manish Sud, Yihua Zhao, Shakti Gupta, Mano R. Maurya, Eoin Fahy, Shankar Subramaniam - Journal of Biological Chemistry 2010 cited by 317

  24. p62/SQSTM1 by Binding to Vitamin D Receptor Inhibits Hepatic Stellate Cell Activity, Fibrosis, and Liver Cancer

    Authors: Ángeles Durán, Eloy D. Hernandez, Miguel Reina‐Campos, Elias A. Castilla, Shankar Subramaniam, Sindhu Raghunandan, Lewis R. Roberts, Tatiana Kisseleva, Michael Karin, María T. Diaz‐Meco, Jorge Moscat - Cancer Cell 2016 cited by 249