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Tanja Stadler

Active 2009–2025

123
Papers
22,772
Citations
62
h-index
109
i10-index

Citations

Citations per year for Tanja Stadler1961: 1 citations2002: 6 citations2004: 10 citations2007: 1 citations2008: 1 citations2010: 5 citations2011: 50 citations2012: 80 citations2013: 141 citations2014: 215 citations2015: 165 citations2016: 163 citations2017: 108 citations2018: 171 citations2019: 424 citations2020: 617 citations2021: 1,009 citations2022: 733 citations2023: 503 citations2024: 732 citations2025: 374 citations2026: 42 citations1962–2001: no citations, so these years are not shown2003: no citations, so this year is not shown2005–2006: no citations, so these years are not shown2009: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 1,804 citing papers, 19.1% of this breakdownUnited Kingdom: 870 citing papers, 9.2% of this breakdownChina: 515 citing papers, 5.4% of this breakdownGermany: 502 citing papers, 5.3% of this breakdownFrance: 439 citing papers, 4.6% of this breakdownSwitzerland: 422 citing papers, 4.5% of this breakdownAustralia: 320 citing papers, 3.4% of this breakdownBrazil: 289 citing papers, 3.1% of this breakdownCanada: 269 citing papers, 2.8% of this breakdownSpain: 230 citing papers, 2.4% of this breakdownNetherlands: 192 citing papers, 2% of this breakdownItaly: 182 citing papers, 1.9% of this breakdown
0%19.1%Other 36.3%

Institutions

Fields

  • Medicine29.4%
  • Biochemistry, Genetics and Molecular Biology27%
  • Agricultural and Biological Sciences10.5%
  • Earth and Planetary Sciences9.2%
  • Environmental Science7%
  • Mathematics6.5%
  • Other10.4%

Topics

  • Genomics and Phylogenetic Studies7.3%
  • Genetic diversity and population structure6.8%
  • SARS-CoV-2 and COVID-19 Research5.7%
  • Evolution and Paleontology Studies4.7%
  • COVID-19 epidemiological studies3.8%
  • SARS-CoV-2 detection and testing2.7%
  • Other69%

Coauthors

All papers

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  1. BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

    Authors: Remco R. Bouckaert, Timothy G. Vaughan, Joëlle Barido-Sottani, Sebastián Duchêne, Mathieu Fourment, Alexandra Gavryushkina, Joseph Heled, Graham Jones, Denise Kühnert, Nicola De Maio, Michael Matschiner, Fábio K. Mendes, Nicola F. Müller, Huw A. Ogilvie, Louis du Plessis, Alex Popinga, Andrew Rambaut, David A. Rasmussen, Igor Siveroni, Marc A. Suchard, Chieh-Hsi Wu, Dong Xie, Chi Zhang, Tanja Stadler, Alexei J. Drummond - PLoS Computational Biology, PLoS Comput. Biol. 2018 cited by 4,729

  2. Practical considerations for measuring the effective reproductive number, Rt

    Authors: Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, Rene Niehus, James A. Hay, Pablo M. De Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse, Katharine Sherratt, Robin N. Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey - PLoS Computational Biology, PLoS Comput. Biol. 2020 cited by 632

  3. CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants

    Authors: Chaoran Chen, Sarah Nadeau, Michael Yared, Philippe Voinov, Ning Xie, Cornelius Roemer, Tanja Stadler - Bioinformatics, Bioinform. 2021 cited by 365

  4. Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC

    Authors: Katharina Jahn, David Dreifuss, Ivan Topolsky, Anina Kull, Pravin Ganesanandamoorthy, Xavier Fernández-Cassi, Carola Bänziger, Alexander J. Devaux, Elyse Stachler, Lea Caduff, Federica Cariti, Álex Tuñas Corzón, Lara Fuhrmann, Chaoran Chen, Kim Philipp Jablonski, Sarah Nadeau, Mirjam Feldkamp, Christian Beisel, Catharine Aquino, Tanja Stadler, Christoph Ort, Tamar Kohn, Timothy R. Julian, Niko Beerenwinkel - Nature Microbiology 2022 cited by 179

  5. Birth–death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV)

    Authors: Tanja Stadler, Denise Kühnert, Sebastian Bonhoeffer, Alexei J. Drummond - National Academy of Sciences, Proceedings of the National Academy of Sciences 2012 cited by 647

  6. Artificial intelligence for modelling infectious disease epidemics

    Authors: Moritz U. G. Kraemer, Joseph L.-H. Tsui, Serina Chang, Spyros Lytras, Mark P. Khurana, Samantha Vanderslott, Sumali Bajaj, Neil Scheidwasser, Jacob Liam Curran-Sebastian, Elizaveta Semenova, Mengyan Zhang, H. Juliette T. Unwin, Oliver J. Watson, Cathal Mills, Abhishek Dasgupta, Luca Ferretti, Samuel V. Scarpino, Etien Koua, Oliver Morgan, Houriiyah Tegally, Ulrich Paquet, Loukas Moutsianas, Christophe Fraser, Neil M. Ferguson, Eric J. Topol, David A. Duchêne, Tanja Stadler, Patricia Kingori, Michael J. Parker, Francesca Dominici, Nigel Shadbolt, Marc A. Suchard, Oliver Ratmann, Seth R. Flaxman, Edward C. Holmes, Manuel Gomez-Rodriguez, Bernhard Schölkopf, Christl A. Donnelly, Oliver G. Pybus, Simon Cauchemez, Samir Bhatt - Nature, Nat. 2025 cited by 132

  7. Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification

    Authors: Robert W. Meredith, Jan E. Janečka, John Gatesy, Oliver A. Ryder, Colleen A. Fisher, Emma C. Teeling, Alisha Goodbla, Eduardo Eizirik, Taiz L. L. Simão, Tanja Stadler, Daniel L. Rabosky, Rodney L. Honeycutt, John J. Flynn, Colleen M. Ingram, Cynthia Steiner, Tiffani L. Williams, Terence J. Robinson, Angela Burk-Herrick, Michael Westerman, Nadia A. Ayoub, Mark S. Springer, William J. Murphy - Science 2011 cited by 1,512

  8. The fossilized birth–death process for coherent calibration of divergence-time estimates

    Authors: Tracy A. Heath, John P. Huelsenbeck, Tanja Stadler - National Academy of Sciences, Proceedings of the National Academy of Sciences 2014 cited by 900

  9. Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity

    Authors: Carina Hoorn, Frank P. Wesselingh, Hans ter Steege, Mauricio A. Bermúdez, A. Mora, J. Sevink, Isabel Sanmartín, Andrea S. Meseguer, Cajsa Lisa Anderson, J. Figueiredo, Carlos Jaramillo, Douglas Riff, Francisco Ricardo Negri, H. Hooghiemstra, John G. Lundberg, Tanja Stadler, Tiina Särkinen, Alexandre Antonelli - Science 2010 cited by 2,403

  10. Bayesian Inference of Species Networks from Multilocus Sequence Data

    Authors: Chi Zhang, Huw A. Ogilvie, Alexei J. Drummond, Tanja Stadler - Molecular Biology and Evolution 2017 cited by 230

  11. Sampling-through-time in birth–death trees

    Authors: Tanja Stadler - Journal of Theoretical Biology 2010 cited by 583

  12. The contrasting phylodynamics of human influenza B viruses

    Authors: Dhanasekaran Vijaykrishna, Edward C. Holmes, Udayan Joseph, Mathieu Fourment, Yvonne C. F. Su, Rebecca Halpin, Raphael TC Lee, Yi‐Mo Deng, Vithiagaran Gunalan, Xudong Lin, Timothy B. Stockwell, Nadia Fedorova, Bin Zhou, Natalie Spirason, Denise Kühnert, Veronika Bošková, Tanja Stadler, Anna‐Maria Costa, Dominic E. Dwyer, Q. Sue Huang, Lance Jennings, William D . Rawlinson, Sheena G. Sullivan, Aeron C. Hurt, Sebastian Maurer‐Stroh, David E. Wentworth, Gavin J. D. Smith, Ian Barr - eLife 2015 cited by 252

  13. Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data

    Authors: Denise Kühnert, Tanja Stadler, Timothy G. Vaughan, Alexei J. Drummond - Molecular Biology and Evolution 2016 cited by 216

  14. The relative transmission fitness of multidrug-resistant Mycobacterium tuberculosis in a drug resistance hotspot

    Authors: Chloé Loiseau, Etthel M. Windels, Sebastian M. Gygli, Levan Jugheli, Nino Maghradze, Daniela Brites, Amanda Ross, Galo A. Goig, Miriam Reinhard, Sònia Borrell, Andrej Trauner, Anna Dötsch, Rusudan Aspindzelashvili, Rebecca Denes, Klaus Reither, Christian Beisel, Nestani Tukvadze, Zaza Avaliani, Tanja Stadler, Sébastien Gagneux - Nature Communications 2023 cited by 71

  15. Bayesian Inference of Sampled Ancestor Trees for Epidemiology and Fossil Calibration

    Authors: Alexandra Gavryushkina, David Welch, Tanja Stadler, Alexei J. Drummond - PLoS Computational Biology, PLoS Comput. Biol. 2014 cited by 413

  16. Effectiveness assessment of non-pharmaceutical interventions: lessons learned from the COVID-19 pandemic

    Authors: Adrian Lison, Nicolas Banholzer, Mrinank Sharma, Sören Mindermann, H. Juliette T. Unwin, Swapnil Mishra, Tanja Stadler, Samir Bhatt, Neil M. Ferguson, Jan Brauner, Werner Vach - The Lancet Public Health 2023 cited by 71

  17. Phylodynamics for cell biologists

    Authors: Tanja Stadler, Oliver G. Pybus, Michael P. H. Stumpf - Science 2021 cited by 102

  18. On incomplete sampling under birth–death models and connections to the sampling-based coalescent

    Authors: Tanja Stadler - Journal of Theoretical Biology 2009 cited by 434

  19. Simulating Trees with a Fixed Number of Extant Species

    Authors: Tanja Stadler - Systematic Biology 2011 cited by 303

  20. Mammalian phylogeny reveals recent diversification rate shifts

    Authors: Tanja Stadler - National Academy of Sciences, Proceedings of the National Academy of Sciences 2011 cited by 469

  21. The Structured Coalescent and Its Approximations

    Authors: Nicola F. Müller, David A. Rasmussen, Tanja Stadler - Molecular Biology and Evolution 2017 cited by 137

  22. estimateR: an R package to estimate and monitor the effective reproductive number

    Authors: Jérémie Scire, Jana S. Huisman, Ana Grosu, Daniel C. Angst, Adrian Lison, Jinzhou Li, Marloes H. Maathuis, Sebastian Bonhoeffer, Tanja Stadler - BMC Bioinformatics, BMC Bioinform. 2023 cited by 56

  23. Total-Evidence Dating under the Fossilized Birth–Death Process

    Authors: Chi Zhang, Tanja Stadler, Seraina Klopfstein, Tracy A. Heath, Fredrik Ronquist - Systematic Biology 2015 cited by 437

  24. Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch

    Authors: Áine O’Toole, Verity Hill, Oliver G. Pybus, Alexander Watts, Isaac I. Bogoch, Kamran Khan, Jane P. Messina, Network for Genomic Surveillance in South Africa (NGS-SA), Brazil-UK CADDE Genomic Network, Houriiyah Tegally, Richard Lessells, Jennifer Giandhari, Sureshnee Pillay, Kefentse A. Tumedi, Naledi Gape Nyepetsi, Malebogo Kebabonye, Maitshwarelo Matsheka, Madisa Mine, Sima Tokajian, Hamad Hassan, Tamara Salloum, Georgi Merhi, Jad Koweyes, Jemma L. Geoghegan, Joep de Ligt, Xiaoyun Ren, Matthew Storey, Nikki E. Freed, Chitra Pattabiraman, Pramada Prasad, Anita Desai, Vasanthapuram Ravi, Thomas F. Schulz, Lars Steinbrück, Tanja Stadler, Antonio Parisi, Angelica Bianco, Darı́o Garcı́a de Viedma, Sergio Buenestado‐Serrano, Vítor Borges, Joana Isidro, Sílvia Duarte, João Paulo Gomes, Neta S. Zuckerman, Michal Mandelboim, Orna Mor, Torsten Seemann, Alicia Arnott, Jenny Draper, Mailie Gall, William D . Rawlinson, Ira W. Deveson, Sanmarié Schlebusch, Jamie McMahon, Lex E.X. Leong, Chuan Kok Lim, Maria Chironna, Daniela Loconsole, Antonin Bal, Laurence Josset, Edward C. Holmes, Kirsten St. George, Erica Lasek‐Nesselquist, Reina S. Sikkema, Bas B. Oude Munnink, Marion Koopmans, Mia Brytting, Vannavada Sudha Rani, S. Pavani, Teemu Smura, Albert Heim, Satu Kurkela, Massab Umair, Muhammad Salman, Barbara Bartolini, Martina Rueca, Christian Drosten, Thorsten Wolff, Olin Silander, Dirk Eggink, Chantal Reusken, Harry Vennema, Aekyung Park, Christine V. F. Carrington, Nikita Sahadeo, Michael J. Carr, Gabo Gonzalez, SEARCH Alliance San Diego, SeqCOVID-Spain, Communicable Diseases Genomic Network (CDGN), Dutch National SARS-CoV-2 surveillance program, Division of Emerging Infectious Diseases (KDCA), Túlio de Oliveira, Nuno R. Faria, Andrew Rambaut, Moritz U. G. Kraemer - Wellcome Open Research 2021 cited by 228