Benli Chai
2003–2023 年に発表
- 21
- 論文数
- 18,026
- 被引用数
- 20
- h 指数
- 21
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology40.6%
- Environmental Science27.7%
- Agricultural and Biological Sciences11.7%
- Medicine8.9%
- Immunology and Microbiology3.6%
- Dentistry2.5%
- その他5%
トピック
- Gut microbiota and health13.4%
- Microbial Community Ecology and Physiology7.4%
- Genomics and Phylogenetic Studies7.2%
- Pharmaceutical and Antibiotic Environmental Impacts4.5%
- Antibiotic Resistance in Bacteria3.5%
- Probiotics and Fermented Foods3%
- その他61%
共著者
- James M. Tiedje17
- James R. Cole16
- Qiong Wang7
- Syed A. Hashsham7
- Robert D. Stedtfeld6
- Donna M. McGarrell5
- Fang Wang4
- George M. Garrity4
- Ryan J. Farris4
- Tiffany M. Stedtfeld4
- Hongjie Sheng3
- Santosh Gunturu3
- Tong Zhang3
- Woo Jun Sul3
- A. S. Kulam-Syed-Mohideen2
- Alex Bateman2
- Andrea Porras-Alfaro2
- Anton I. Petrov2
- C. Titus Brown2
- Christian Zwieb2
- E. Cardenas2
- Elspeth A. Bruford2
- Guy Cochrane2
- Hui Li2
全論文
- Ribosomal Database Project: data and tools for high throughput rRNA analysis
著者: James R. Cole, Qiong Wang, Jordan A. Fish, Benli Chai, Donna M. McGarrell, Yanni Sun, C. Titus Brown, Andrea Porras-Alfaro, Cheryl R. Kuske, James M. Tiedje - Nucleic Acids Research, Nucleic Acids Res. 2013 被引用: 4,596
- ARGs-OAP v2.0 with an expanded SARG database and Hidden Markov Models for enhancement characterization and quantification of antibiotic resistance genes in environmental metagenomes
著者: Xiaole Yin, Xiaotao Jiang, Benli Chai, Liguan Li, Ying Yang, James R. Cole, James M. Tiedje, Tong Zhang - Bioinformatics, Bioinform. 2018 被引用: 711
- The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
著者: James R. Cole, Qiong Wang, E. Cardenas, Jordan A. Fish, Benli Chai, Ryan J. Farris, A. S. Kulam-Syed-Mohideen, Donna M. McGarrell, Terry L. Marsh, George M. Garrity, James M. Tiedje - Nucleic Acids Research, Nucleic Acids Res. 2008 被引用: 4,860
- ARGs-OAP: online analysis pipeline for antibiotic resistance genes detection from metagenomic data using an integrated structured ARG-database
著者: Ying Yang, Xiaotao Jiang, Benli Chai, Liping Ma, Bing Li, Anni Zhang, James R. Cole, James M. Tiedje, Tong Zhang - Bioinformatics, Bioinform. 2016 被引用: 396
- In-feed antibiotic effects on the swine intestinal microbiome
著者: Torey Looft, Timothy A. Johnson, Heather K. Allen, Darrell O. Bayles, David P. Alt, Robert D. Stedtfeld, Woo Jun Sul, Tiffany M. Stedtfeld, Benli Chai, James R. Cole, Syed A. Hashsham, James M. Tiedje, Thad B. Stanton - National Academy of Sciences, Proceedings of the National Academy of Sciences 2012 被引用: 1,089
- Metagenomic analysis reveals the shared and distinct features of the soil resistome across tundra, temperate prairie, and tropical ecosystems
著者: Xun Qian, Santosh Gunturu, Jiarong Guo, Benli Chai, James R. Cole, Jie Gu, James M. Tiedje - Microbiome 2021 被引用: 134
- RNAcentral: a comprehensive database of non-coding RNA sequences
著者: Anton I. Petrov, Simon Kay, Ioanna Kalvari, Kevin Howe, Kristian Gray, Elspeth A. Bruford, Paul Kersey, Guy Cochrane, ROBERT FINN, Alex Bateman, Ana Kozomara, Sam Griffiths‐Jones, Adam Frankish, Christian Zwieb, Britney Y. Lau, Kelly P. Williams, Patricia P. Chan, Todd M. Lowe, Jamie J. Cannone, Robin R. Gutell, Magdalena A. Machnicka, Janusz M. Bujnicki, Maki Yoshihama, Naoya Kenmochi, Benli Chai, James R. Cole, M. Szymański, Wojciech M. Karłowski, Valerie Wood, Eva Huala, Tanya Berardini, Yi Zhao, Runsheng Chen, Weimin Zhu, Maria D. Paraskevopoulou, Ioannis S. Vlachos, Artemis G. Hatzigeorgiou, Lina Ma, Zhang Zhang, Joern Puetz, Peter F. Stadler, Daniel McDonald, Siddhartha Basu, Petra Fey, Stacia R. Engel, J. Michael Cherry, Pieter‐Jan Volders, Pieter Mestdagh, Jacek Wower, Michael B. Clark, Xiu Cheng Quek, Marcel E. Dinger - Nucleic Acids Research, Nucleic Acids Res. 2016 被引用: 274
- Primer set 2.0 for highly parallel qPCR array targeting antibiotic resistance genes and mobile genetic elements
著者: Robert D. Stedtfeld, Xueping Guo, Tiffany M. Stedtfeld, Hongjie Sheng, Maggie R. Williams, Kristin Hauschild, Santosh Gunturu, Leo Tift, Fang Wang, Adina Howe, Benli Chai, Daqiang Yin, James R. Cole, James M. Tiedje, Syed A. Hashsham - FEMS Microbiology Ecology 2018 被引用: 187
- Sequence-based classification and identification of Fungi.
著者: David S. Hibbett, Kessy Abarenkov, Urmas Kõljalg, Maarja Öpik, Benli Chai, James R. Cole, Qiong Wang, P.W. Crous, Vincent Robert, Thorunn Helgason, Joshua R. Herr, Paul M. Kirk, Shiloh R. Lueschow, Kerry O’Donnell, R. Henrik Nilsson, Ryoko Oono, Conrad L. Schoch, Christopher W. Smyth, Donald M. Walker, Andrea Porras‐Alfaro, John W. Taylor, David M. Geiser - 2018 被引用: 215
- Long-Term Effect of Different Fertilization and Cropping Systems on the Soil Antibiotic Resistome
著者: Fang Wang, Min Xu, Robert D. Stedtfeld, Hongjie Sheng, Jianbo Fan, Ming Liu, Benli Chai, Teotônio Soares de Carvalho, Hui Li, Zhongpei Li, Syed A. Hashsham, James M. Tiedje - Environmental Science & Technology 2018 被引用: 144
- Gut microbiota research nexus: One Health relationship between human, animal, and environmental resistomes
著者: Yuhao Fu, Qingyuan Dou, Kornelia Smalla, Yu Wang, Timothy A. Johnson, Kristian K. Brandt, Zhi Mei, Maoyuan Liao, Syed A. Hashsham, Andreas Schäffer, Hauke Smidt, Tong Zhang, Hui Li, Robert D. Stedtfeld, Hongjie Sheng, Benli Chai, Marko Virta, Xin Jiang, Fang Wang, Yong‐Guan Zhu, James M. Tiedje - mLife 2023 被引用: 55
- FunGene: the functional gene pipeline and repository
著者: Jordan Fish, Benli Chai, Qiong Wang, Yanni Sun, C. Titus Brown, James M. Tiedje, James R. Cole - Frontiers in Microbiology 2013 被引用: 663
- Influence of Soil Characteristics and Proximity to Antarctic Research Stations on Abundance of Antibiotic Resistance Genes in Soils
著者: Fang Wang, Robert D. Stedtfeld, Ok-Sun Kim, Benli Chai, Luxi Yang, Tiffany M. Stedtfeld, Soon Gyu Hong, Dockyu Kim, Hyoun Soo Lim, Syed A. Hashsham, James M. Tiedje, Woo Jun Sul - Environmental Science & Technology 2016 被引用: 150
- The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
著者: James R. Cole, Benli Chai, Terry L. Marsh, Ryan J. Farris, Qiong Wang, S. A. Kulam, S. Chandra, Donna M. McGarrell, Thomas M. Schmidt, George M. Garrity, James M. Tiedje - Nucleic Acids Research, Nucleic Acids Res. 2003 被引用: 1,428
- The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
著者: James R. Cole, Benli Chai, Ryan J. Farris, Qiong Wang, S. A. Kulam, Donna M. McGarrell, George M. Garrity, James M. Tiedje - Nucleic Acids Research, Nucleic Acids Res. 2004 被引用: 1,482
- RNAcentral: an international database of ncRNA sequences
著者: Anton I. Petrov, Simon Kay, Richard Gibson, Eugene Kulesha, D. Staines, Elspeth A. Bruford, Matt W. Wright, Sarah Burge, ROBERT FINN, Paul Kersey, Guy Cochrane, Alex Bateman, Elspeth A. Bruford, Sam Griffiths‐Jones, Jennifer Harrow, Patricia P. Chan, Todd M. Lowe, Christian Zwieb, Jacek Wower, Kelly P. Williams, Corey Hudson, Robin R. Gutell, Michael B. Clark, Marcel E. Dinger, Xiu Cheng Quek, Janusz M. Bujnicki, Nam‐Hai Chua, Jun Liu, Huan Wang, Geir Skogerbø, Yi Zhao, Runsheng Chen, Weimin Zhu, James R. Cole, Benli Chai, Hsien‐Da Huang, His-Yuan Huang, J. Michael Cherry, Artemis G. Hatzigeorgiou, Kim D. Pruitt - Nucleic Acids Research, Nucleic Acids Res. 2014 被引用: 128
- The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
著者: James R. Cole, Benli Chai, Ryan J. Farris, Qiong Wang, A. S. Kulam-Syed-Mohideen, Donna M. McGarrell, A. M. Bandela, E. Cardenas, George M. Garrity, James M. Tiedje - Nucleic Acids Research, Nucleic Acids Res. 2006 被引用: 1,169
- Targeted assemblies of cas1 suggest CRISPR-Cas’s response to soil warming
著者: Ruonan Wu, Benli Chai, James R. Cole, Santosh Gunturu, Xue Guo, Renmao Tian, Ji-Dong Gu, Jizhong Zhou, James M. Tiedje - The ISME Journal 2020 被引用: 18
- Gene-targeted-metagenomics reveals extensive diversity of aromatic dioxygenase genes in the environment
著者: Shoko Iwai, Benli Chai, Woo Jun Sul, James R. Cole, Syed A. Hashsham, James M. Tiedje - The ISME Journal 2009 被引用: 132
- Virulence factor activity relationships (VFARs): a bioinformatics perspective
著者: Hassan Waseem, Maggie R. Williams, Tiffany M. Stedtfeld, Benli Chai, Robert D. Stedtfeld, James R. Cole, James M. Tiedje, Syed A. Hashsham - Environmental Science Processes & Impacts 2017 被引用: 29
- Different crop rotation systems as drivers of change in soil bacterial community structure and yield of rice, Oryza sativa
著者: Do Thi Xuan, Võ Thị Gương, Anna Rosling, Sadhna Alström, Benli Chai, Nils Högberg - Biology and Fertility of Soils 2011 被引用: 166
全 21 件を表示しました。
