Jody Clements
2004–2025 年に発表
- 41
- 論文数
- 30,264
- 被引用数
- 35
- h 指数
- 41
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology55%
- Medicine13.9%
- Agricultural and Biological Sciences11.4%
- Neuroscience6.4%
- Environmental Science4.8%
- Immunology and Microbiology2.3%
- その他6.2%
トピック
- Genomics and Phylogenetic Studies5.9%
- RNA and protein synthesis mechanisms2.7%
- Cancer Genomics and Diagnostics2.6%
- Bioinformatics and Genomic Networks2.4%
- Machine Learning in Bioinformatics1.8%
- Protein Structure and Dynamics1.6%
- その他83%
共著者
- Robert D. Finn9
- Simon Forbes9
- John Bogovic8
- Jon W. Teague8
- Michał Januszewski8
- Sean R. Eddy8
- C. Shan Xu7
- Gary B. Huang7
- Kenneth J. Hayworth7
- Shin-ya Takemura7
- William T. Katz7
- Zhiyuan Lu7
- Adam P. Butler6
- Andrew L. Lemire6
- Chris Hunter6
- Claire Stevens6
- David Jones6
- Ed Dicks6
- Gemma Buck6
- Graham R. Bignell6
- Helen Davies6
- Hideo Otsuna6
- Jennifer Cole6
- Katy Hills6
全論文
- HMMER web server: interactive sequence similarity searching
著者: Robert D. Finn, Jody Clements, Sean R. Eddy - Nucleic Acids Research, Nucleic Acids Res. 2011 被引用: 6,406
- Pfam: the protein families database
著者: Robert D. Finn, Alex Bateman, Jody Clements, Penelope Coggill, Ruth Y. Eberhardt, Sean R. Eddy, Andreas Heger, Kirstie Hetherington, Liisa Holm, Jaina Mistry, Erik L. L. Sonnhammer, John G. Tate, Marco Punta - Nucleic Acids Research, Nucleic Acids Res. 2013 被引用: 6,527
- A connectome and analysis of the adult Drosophila central brain
著者: Louis K. Scheffer, C. Shan Xu, Michał Januszewski, Zhiyuan Lu, Shin-ya Takemura, Kenneth J. Hayworth, Gary B. Huang, Kazunori Shinomiya, Jeremy Maitlin-Shepard, Stuart Berg, Jody Clements, Philip M. Hubbard, William T. Katz, Lowell Umayam, Ting Zhao, David Ackerman, Tim Blakely, John Bogovic, Tom Dolafi, Dagmar Kainmueller, Takashi Kawase, Khaled Khairy, Laramie Leavitt, Peter H. Li, Larry Lindsey, Nicole Neubarth, Donald J. Olbris, Hideo Otsuna, Eric T. Trautman, Masayoshi Ito, Alexander Shakeel Bates, Jens Goldammer, Tanya Wolff, Robert Svirskas, Philipp Schlegel, Erika Neace, Christopher J Knecht, Chelsea X. Alvarado, Dennis Bailey, Samantha Ballinger, J Borycz, Brandon S Canino, Natasha Cheatham, Michael Cook, Marisa Dreher, Octave Duclos, Bryon Eubanks, Kelli Fairbanks, Samantha Finley-May, Nora Forknall, Audrey Francis, Gary Patrick Hopkins, Emily Joyce, Sungjin Kim, Nicole Kirk, Julie Kovalyak, Shirley A Lauchie, Alanna Lohff, Charli Maldonado, Emily A Manley, Sari McLin, Caroline Mooney, Miatta Ndama, Omotara Ogundeyi, Nneoma Okeoma, Christopher Ordish, Nicholas Padilla, Christopher Patrick, Tyler Paterson, Elliott Phillips, Emily M Phillips, Neha Rampally, Caitlin Ribeiro, Madelaine Robertson, Jon Thomson Rymer, Sean M Ryan, Megan Sammons, Anne K Scott, Ashley L Scott, Aya Shinomiya, Claire Smith, Kelsey Smith, Natalie Smith, Margaret A. Sobeski, Alia Suleiman, Jackie Swift, Satoko Takemura, Iris Talebi, Dorota Tarnogorska, Emily Tenshaw, Temour Tokhi, John J Walsh, Tansy Yang, Jane Anne Horne, Feng Li, Ruchi Parekh, Patricia K. Rivlin, Vivek Jayaraman, Marta Costa, Gregory S.X.E. Jefferis ほか 8 名 - eLife 2020 被引用: 1,224
- Whole-cell organelle segmentation in volume electron microscopy
著者: Larissa Heinrich, Davis Bennett, David Ackerman, Grace Park, John Bogovic, Nils Eckstein, Alyson Petruncio, Jody Clements, Song Pang, C. Shan Xu, Jan Funke, Wyatt Korff, Harald F. Hess, Jennifer Lippincott‐Schwartz, Stephan Saalfeld, Aubrey V. Weigel, COSEM Project Team, Riasat Ali, Rebecca Arruda, Rohit Bahtra, Destiny Nguyen - Nature 2021 被引用: 304
- Patterns of somatic mutation in human cancer genomes
著者: Christopher Greenman, Philip Stephens, Raffaella Smith, Gillian L. Dalgliesh, Chris Hunter, Graham R. Bignell, Helen Davies, Jon W. Teague, Adam P. Butler, Claire Stevens, Sarah Edkins, Sarah O’Meara, Imre Västrik, Esther Schmidt, Tim Avis, Syd Barthorpe, Gurpreet Bhamra, Gemma Buck, Bhudipa Choudhury, Jody Clements, Jennifer Cole, Ed Dicks, Simon Forbes, Kristian Gray, Kelly Halliday, Rachel Harrison, Katy Hills, Jon Hinton, Andy Jenkinson, David Jones, Andy Menzies, Tatiana Mironenko, Janet Perry, Keiran Raine, David Richardson, Rebecca Shepherd, Alexandra Small, Calli Tofts, Jennifer Varian, Tony Webb, Sofie West, Sara Widaa, Andy Yates, Daniel P. Cahill, David N. Louis, Peter Goldstraw, Andrew G. Nicholson, Francis Brasseur, Leendert H. J. Looijenga, Barbara L. Weber, Yoke-Eng Chiew, Anna DeFazio, Mel Greaves, Anthony R. Green, Peter J. Campbell, Ewan Birney, Douglas F. Easton, Georgia Chenevix‐Trench, Min-Han Tan, Sok Kean Khoo, Bin Tean Teh, Siu Tsan Yuen, Suet Yi Leung, Richard Wooster, P. Andrew Futreal, Michael R. Stratton - Nature 2007 被引用: 3,147
- The Dfam database of repetitive DNA families
著者: Robert Hubley, Robert D. Finn, Jody Clements, Sean R. Eddy, Thomas A. Jones, Weidong Bao, Arian F. A. Smit, Travis J. Wheeler - Nucleic Acids Research, Nucleic Acids Res. 2015 被引用: 883
- HMMER web server: 2015 update
著者: Robert D. Finn, Jody Clements, William Arndt, Benjamin L. Miller, Travis J. Wheeler, Fabian Schreiber, Alex Bateman, Sean R. Eddy - Nucleic Acids Research, Nucleic Acids Res. 2015 被引用: 999
- A searchable image resource of Drosophila GAL4 driver expression patterns with single neuron resolution
著者: Geoffrey W Meissner, Aljoscha Nern, Zachary Dorman, Gina M DePasquale, Kaitlyn Forster, Theresa V Gibney, Joanna H Hausenfluck, Yisheng He, Nirmala Iyer, Jennifer Jeter, Lauren Johnson, Rebecca M. Johnston, Kelley Lee, Brian Melton, Brianna Yarbrough, Christopher T Zugates, Jody Clements, Cristian Goina, Hideo Otsuna, Konrad Rokicki, Robert Svirskas, Yoshinori Aso, Gwyneth M Card, Barry J. Dickson, Erica Ehrhardt, Jens Goldammer, Masayoshi Ito, Dagmar Kainmueller, Wyatt Korff, Lisa Mais, Ryo Minegishi, Shigehiro Namiki, Gerald M. Rubin, Gabriella R Sterne, Tanya Wolff, Oz Malkesman, FlyLight Project Team - eLife 2023 被引用: 127
- The Pfam protein families database
著者: Marco Punta, Penny C. Coggill, Ruth Y. Eberhardt, Jaina Mistry, John G. Tate, Chris Boursnell, Ningze Pang, Kristoffer Forslund, Goran Ceric, Jody Clements, Andreas Heger, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman, Robert D. Finn - Nucleic Acids Research, Nucleic Acids Res. 2011 被引用: 3,780
- A statistical test for conserved RNA structure shows lack of evidence for structure in lncRNAs
著者: Elena Rivas, Jody Clements, Sean R. Eddy - Nature Methods 2016 被引用: 420
- The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website
著者: Sally Bamford, Elisabeth Dawson, Simon Forbes, Jody Clements, Roger Pettett, Ahmet Doǧan, Adrienne M. Flanagan, Jon W. Teague, PA Futreal, Michael R. Stratton, Richard Wooster - British Journal of Cancer 2004 被引用: 1,297
- neuPrint: An open access tool for EM connectomics
著者: Stephen M. Plaza, Jody Clements, Tom Dolafi, Lowell A. Umayam, Nicole N. Neubarth, Louis K. Scheffer, Stuart E. Berg - Frontiers in Neuroinformatics, Frontiers Neuroinformatics 2022 被引用: 146
- Skylign: a tool for creating informative, interactive logos representing sequence alignments and profile hidden Markov models
著者: Travis J. Wheeler, Jody Clements, Robert D. Finn - BMC Bioinformatics, BMC Bioinform. 2014 被引用: 401
- Dfam: a database of repetitive DNA based on profile hidden Markov models
著者: Travis J. Wheeler, Jody Clements, Sean R. Eddy, Robert Hubley, Thomas A. Jones, Jerzy Jurka, Arian F. A. Smit, Robert D. Finn - Nucleic Acids Research, Nucleic Acids Res. 2012 被引用: 325
- Extensive and spatially variable within-cell-type heterogeneity across the basolateral amygdala
著者: Timothy P. O’Leary, Kaitlin E. Sullivan, Lihua Wang, Jody Clements, Andrew L. Lemire, Mark S. Cembrowski - eLife 2020 被引用: 93
- Connectome-driven neural inventory of a complete visual system
著者: Aljoscha Nern, Frank Loesche, Shin-ya Takemura, Laura E. Burnett, Marisa Dreher, Eyal Gruntman, Judith Hoeller, Gary B. Huang, Michał Januszewski, Nathan C Klapoetke, Sanna Koskela, Kit D. Longden, Zhiyuan Lu, Stephan Preibisch, Wei Qiu, Edward M. Rogers, Pavithraa Seenivasan, Arthur Zhao, John Bogovic, Brandon S Canino, Jody Clements, Michael Cook, Samantha Finley-May, Miriam A Flynn, Alexandra M. C. Fragniere, Imran Hameed, Kenneth J. Hayworth, Gary Patrick Hopkins, Philip M. Hubbard, William T. Katz, Julie Kovalyak, Shirley A Lauchie, Meghan Leonard, Alanna Lohff, Charli Maldonado, Caroline Mooney, Nneoma Okeoma, Donald J. Olbris, Christopher Ordish, Tyler Paterson, Emily M Phillips, Tobias Pietzsch, Jennifer Rivas Salinas, Patricia K. Rivlin, Philipp Schlegel, Ashley L Scott, Louis A Scuderi, Satoko Takemura, Iris Talebi, Alexander Thomson, Eric T. Trautman, Lowell Umayam, Claire Smith, John J Walsh, C. Shan Xu, Emily A Yakal, Tansy Yang, Ting Zhao, Jan Funke, Reed George, Harald F. Hess, Gregory S.X.E. Jefferis, Christopher Knecht, Wyatt Korff, Stephen M. Plaza, Sandro Romani, Stephan Saalfeld, Louis K. Scheffer, Stuart Berg, Gerald M. Rubin, Michael B. Reiser - Nature 2024 被引用: 50
- A Hypermutation Phenotype and Somatic MSH6 Mutations in Recurrent Human Malignant Gliomas after Alkylator Chemotherapy
著者: Chris Hunter, Raffaella Smith, Daniel P. Cahill, Philip Stephens, Claire Stevens, Jon W. Teague, Chris Greenman, Sarah Edkins, Graham R. Bignell, Helen Davies, Sarah O’Meara, Adrian G. Parker, Tim Avis, Syd Barthorpe, Lisa Brackenbury, Gemma Buck, Adam P. Butler, Jody Clements, Jennifer Cole, Ed Dicks, Simon Forbes, Matthew Gorton, Kristian Gray, Kelly Halliday, Rachel Harrison, Katy Hills, Jonathon Hinton, Andy Jenkinson, David Jones, Vivienne Kosmidou, Ross Laman, Richard Lugg, Andrew Menzies, Janet Perry, Robert Petty, Keiran Raine, David Richardson, Rebecca Shepherd, Alexandra Small, Helen Solomon, Calli Tofts, Jennifer Varian, Sofie West, Sara Widaa, Andy Yates, Douglas F. Easton, Gregory J. Riggins, Jennifer E. Roy, Kymberly K. Levine, Wolf Mueller, Tracy T. Batchelor, David N. Louis, Michael R. Stratton, P. Andrew Futreal, Richard Wooster - Cancer Research 2006 被引用: 435
- Mutation analysis of 24 known cancer genes in the NCI-60 cell line set
著者: Ogechi Ikediobi, Helen Davies, Graham R. Bignell, Sarah Edkins, Claire Stevens, Sarah O’Meara, Thomas Santarius, Tim Avis, Syd Barthorpe, Lisa Brackenbury, Gemma Buck, Adam P. Butler, Jody Clements, Jennifer Cole, Ed Dicks, Simon Forbes, Kristian Gray, Kelly Halliday, Rachel Harrison, Katy Hills, Jonathan Hinton, Chris Hunter, Andy Jenkinson, David Jones, Vivienne Kosmidou, Richard Lugg, Andrew Menzies, Tatiana Mironenko, Adrian G. Parker, Janet Perry, Keiran Raine, David Richardson, Rebecca Shepherd, Alex Small, Raffaella Smith, Helen Solomon, Philip Stephens, Jon W. Teague, Calli Tofts, Jennifer Varian, Tony Webb, Sofie West, Sara Widaa, Andy Yates, William C. Reinhold, John N. Weinstein, Michael R. Stratton, P. Andrew Futreal, Richard Wooster - Molecular Cancer Therapeutics 2006 被引用: 442
- A Connectome of the Male Drosophila Ventral Nerve Cord
著者: Shin-ya Takemura, Kenneth J. Hayworth, Gary B. Huang, Michał Januszewski, Zhiyuan Lu, Elizabeth C. Marin, Stephan Preibisch, C. Shan Xu, John Bogovic, Andrew S Champion, Han SJ Cheong, Marta Costa, Katharina Eichler, William T. Katz, Christopher Knecht, Feng Li, Billy J Morris, Christopher Ordish, Patricia K. Rivlin, Philipp Schlegel, Kazunori Shinomiya, Tomke Stürner, Ting Zhao, Griffin Badalamente, Dennis Bailey, Paul Brooks, Brandon S Canino, Jody Clements, Michael Cook, Octave Duclos, Christopher R Dunne, Kelli Fairbanks, Siqi Fang, Samantha Finley-May, Audrey Francis, Reed George, Marina Gkantia, Kyle Harrington, Gary Patrick Hopkins, Joseph Hsu, Philip M. Hubbard, Alexandre Javier, Dagmar Kainmueller, Wyatt Korff, Julie Kovalyak, Dominik Krzemiński, Shirley A Lauchie, Alanna Lohff, Charli Maldonado, Emily A Manley, Caroline Mooney, Erika Neace, Matthew Nichols, Omotara Ogundeyi, Nneoma Okeoma, Tyler Paterson, Elliott Phillips, Emily M Phillips, Caitlin Ribeiro, Sean M Ryan, Jon Thomson Rymer, Anne K Scott, Ashley L Scott, David Shepherd, Aya Shinomiya, Claire Smith, Natalie Smith, Alia Suleiman, Satoko Takemura, Iris Talebi, Imaan FM Tamimi, Eric T. Trautman, Lowell Umayam, John J Walsh, Tansy Yang, Gerald M. Rubin, Louis K. Scheffer, Jan Funke, Stephan Saalfeld, Harald F. Hess, Stephen M. Plaza, Gwyneth M Card, Gregory S.X.E. Jefferis, Stuart Berg - 2023 被引用: 58
- Neuronal cell types, projections, and spatial organization of the central amygdala
著者: Timothy P. O’Leary, Rennie Kendrick, Brianna N. Bristow, Kaitlin E. Sullivan, Lihua Wang, Jody Clements, Andrew L. Lemire, Mark S. Cembrowski - iScience 2022 被引用: 44
- Spatially patterned excitatory neuron subtypes and projections of the claustrum
著者: Sarah R. Erwin, Brianna N. Bristow, Kaitlin E. Sullivan, Rennie Kendrick, Brian A. Marriott, Lihua Wang, Jody Clements, Andrew L. Lemire, Jesse Jackson, Mark S. Cembrowski - eLife 2021 被引用: 57
- The subiculum is a patchwork of discrete subregions
著者: Mark S. Cembrowski, Lihua Wang, Andrew L. Lemire, Monique Copeland, Salvatore F. DiLisio, Jody Clements, Nelson Spruston - eLife 2018 被引用: 120
- Sharp cell-type-identity changes differentiate the retrosplenial cortex from the neocortex
著者: Kaitlin E. Sullivan, Larissa Kraus, Margarita Kapustina, Lihua Wang, Tara R. Stach, Andrew L. Lemire, Jody Clements, Mark S. Cembrowski - Cell Reports 2023 被引用: 25
- The Catalogue of Somatic Mutations in Cancer (COSMIC)
著者: Simon Forbes, Gurpreet Bhamra, Sally Bamford, Elisabeth Dawson, Chai Yin Kok, Jody Clements, Andrew Menzies, Jon W. Teague, P. Andrew Futreal, Michael R. Stratton - Current Protocols in Human Genetics 2008 被引用: 918
