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Liisa Holm

1986–2024 年に発表

115
論文数
45,157
被引用数
74
h 指数
101
i10 指数

被引用数

Liisa Holm の年別被引用数1886 年: 被引用 1 件1896 年: 被引用 1 件1975 年: 被引用 1 件1978 年: 被引用 3 件1981 年: 被引用 3 件1983 年: 被引用 2 件1984 年: 被引用 2 件1986 年: 被引用 1 件1987 年: 被引用 11 件1988 年: 被引用 6 件1989 年: 被引用 10 件1990 年: 被引用 12 件1991 年: 被引用 11 件1992 年: 被引用 31 件1993 年: 被引用 24 件1994 年: 被引用 74 件1995 年: 被引用 104 件1996 年: 被引用 148 件1997 年: 被引用 229 件1998 年: 被引用 218 件1999 年: 被引用 283 件2000 年: 被引用 395 件2001 年: 被引用 343 件2002 年: 被引用 342 件2003 年: 被引用 446 件2004 年: 被引用 461 件2005 年: 被引用 460 件2006 年: 被引用 437 件2007 年: 被引用 372 件2008 年: 被引用 326 件2009 年: 被引用 352 件2010 年: 被引用 456 件2011 年: 被引用 588 件2012 年: 被引用 595 件2013 年: 被引用 661 件2014 年: 被引用 672 件2015 年: 被引用 694 件2016 年: 被引用 573 件2017 年: 被引用 434 件2018 年: 被引用 409 件2019 年: 被引用 1,055 件2020 年: 被引用 1,008 件2021 年: 被引用 962 件2022 年: 被引用 765 件2023 年: 被引用 596 件2024 年: 被引用 973 件2025 年: 被引用 418 件2026 年: 被引用 36 件1887〜1895 年は被引用が無いため表示していません1897〜1974 年は被引用が無いため表示していません1976〜1977 年は被引用が無いため表示していません1979〜1980 年は被引用が無いため表示していません1982 年は被引用が無いため表示していません1985 年は被引用が無いため表示していません

引用元

国・地域

この著者を引用した国・地域の世界地図アメリカ合衆国: 引用元論文 5,635 件、この内訳の 26.7%中国: 引用元論文 2,146 件、この内訳の 10.2%イギリス: 引用元論文 1,804 件、この内訳の 8.5%ドイツ: 引用元論文 1,467 件、この内訳の 6.9%フランス: 引用元論文 888 件、この内訳の 4.2%カナダ: 引用元論文 717 件、この内訳の 3.4%日本: 引用元論文 666 件、この内訳の 3.1%オーストラリア: 引用元論文 536 件、この内訳の 2.5%スペイン: 引用元論文 535 件、この内訳の 2.5%イタリア: 引用元論文 519 件、この内訳の 2.5%インド: 引用元論文 500 件、この内訳の 2.4%スイス: 引用元論文 442 件、この内訳の 2.1%
0%26.7%その他 25%

機関

分野

  • Biochemistry, Genetics and Molecular Biology63.2%
  • Medicine9.8%
  • Agricultural and Biological Sciences7.8%
  • Environmental Science4.7%
  • Computer Science3.6%
  • Immunology and Microbiology3.3%
  • その他7.6%

トピック

  • Protein Structure and Dynamics6.3%
  • Genomics and Phylogenetic Studies5.6%
  • RNA and protein synthesis mechanisms4.5%
  • Enzyme Structure and Function4.4%
  • Machine Learning in Bioinformatics4.2%
  • Bioinformatics and Genomic Networks3.2%
  • その他71.8%

共著者

全論文

検索で開く
  1. Pfam: the protein families database

    著者: Robert D. Finn, Alex Bateman, Jody Clements, Penelope Coggill, Ruth Y. Eberhardt, Sean R. Eddy, Andreas Heger, Kirstie Hetherington, Liisa Holm, Jaina Mistry, Erik L. L. Sonnhammer, John G. Tate, Marco Punta - Nucleic Acids Research, Nucleic Acids Res. 2013 被引用: 6,527

  2. Dali server: structural unification of protein families

    著者: Liisa Holm - Nucleic Acids Research, Nucleic Acids Res. 2022 被引用: 997

  3. DALI shines a light on remote homologs: One hundred discoveries

    著者: Liisa Holm, Aleksi Laiho, Petri Törönen, Marco Salgado - Protein Science 2022 被引用: 709

  4. A large-scale evaluation of computational protein function prediction

    著者: Predrag Radivojac, Wyatt T. Clark, Tal Oron, Alexandra M. Schnoes, Tobias Wittkop, Artem Sokolov, Kiley Graim, Christopher S. Funk, Karin Verspoor, Asa Ben‐Hur, Gaurav Pandey, Jeffrey M. Yunes, Ameet Talwalkar, Susanna Repo, Michael L Souza, Damiano Piovesan, Rita Casadio, Zheng Wang, Jianlin Cheng, Hai Fang, Julian Gough, Patrik Koskinen, Petri Törönen, Jussi Nokso-Koivisto, Liisa Holm, Domenico Cozzetto, Daniel Buchan, Kevin Bryson, David T. Jones, Bhakti Limaye, Harshal Inamdar, Avik Datta, Sunitha K Manjari, Rajendra Joshi, Meghana Chitale, Daisuke Kihara, Andreas Martin Lisewski, Serkan Erdin, Eric Venner, Olivier Lichtarge, Robert Rentzsch, Haixuan Yang, Alfonso E. Romero, Prajwal Bhat, Alberto Paccanaro, Tobias Hamp, Rebecca Kaßner, Stefan Seemayer, Esmeralda Vicedo, Christian Schaefer, Dominik Achten, Florian Auer, Ariane C. Boehm, Tatjana Braun, Maximilian Hecht, B. Mark Heron, Peter Hönigschmid, Thomas A. Hopf, Stefanie Kaufmann, Michael Kiening, Denis Krompaß, Cedric Landerer, Yannick Mahlich, Manfred Roos, Jari Björne, Tapio Salakoski, Andrew Wong, Hagit Shatkay, Fanny Gatzmann, I. Sommer, Mark N. Wass, Michael J.E. Sternberg, Nives Škunca, Fran Supek, Matko Bošnjak, Panče Panov, Sašo Džeroski, Tomislav Šmuc, Yiannis Kourmpetis, Aalt D. J. van Dijk, Cajo J. F. ter Braak, Yuanpeng Zhou, Qingtian Gong, Xinran Dong, Weidong Tian, Marco Falda, Paolo Fontana, Enrico Lavezzo, Barbara Di Camillo, Stefano Toppo, Liang Lan, Nemanja Djuric, Yuhong Guo, Slobodan Vučetić, Amos Bairoch, Michal Linial, Patricia C. Babbitt, Steven E. Brenner, Christine Orengo, Burkhard Rost ほか 2 名 - Nature Methods 2013 被引用: 1,095

  5. The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

    著者: Naihui Zhou, Yuxiang Jiang, Timothy Bergquist, Alexandra Lee, Balint Z Kacsoh, Alex W. Crocker, Kimberley A. Lewis, George P. Georghiou, Huy Nguyen, Md-Nafiz Hamid, L. Taylor Davis, Tunca Doğan, Volkan Atalay, Ahmet Süreyya Rifaioğlu, Alperen Dalkıran, Rengül Çetin-Atalay, Chengxin Zhang, Rebecca L. Hurto, Peter L. Freddolino, Yang Zhang, Prajwal Bhat, Fran Supek, José M. Fernández, Branislava Gemović, Vladimir Perović, Radoslav Davidović, Neven Šumonja, Nevena Veljković, Ehsaneddin Asgari, Mohammad R. K. Mofrad, Giuseppe Profiti, Castrense Savojardo, Pier Luigi Martelli, Rita Casadio, Florian Boecker, Heiko Schoof, Indika Kahanda, Natalie Thurlby, Alice C. McHardy, Alexandre Renaux, Rabie Saidi, Julian Gough, Alex A. Freitas, Magdalena Antczak, Fábio Fabris, Mark N. Wass, Jie Hou, Jianlin Cheng, Zheng Wang, Alfonso E. Romero, Alberto Paccanaro, Haixuan Yang, Tatyana Goldberg, Chenguang Zhao, Liisa Holm, Petri Törönen, Alan Medlar, Elaine Zosa, Itamar Borukhov, Ilya B. Novikov, Angela D. Wilkins, Olivier Lichtarge, Po-Han Chi, Wei-Cheng Tseng, Michal Linial, Peter W. Rose, Christophe Dessimoz, Vedrana Vidulin, Sašo Džeroski, Ian Sillitoe, Sayoni Das, Jonathan Lees, David T. Jones, Cen Wan, Domenico Cozzetto, Rui Fa, Mateo Torres, Alex Warwick Vesztrocy, José Manuel Rodrı́guez, Michael L. Tress, Marco Frasca, Marco Notaro, Giuliano Grossi, Alessandro Petrini, Matteo Ré, Giorgio Valentini, Marco Mesiti, Daniel B. Roche, Jonas Reeb, David W. Ritchie, Sabeur Aridhi, Seyed Ziaeddin Alborzi, Marie‐Dominique Devignes, Da Chen Emily Koo, Richard Bonneau, Vladimir Gligorijević, Meet Barot, Hai Fang, Stefano Toppo, Enrico Lavezzo ほか 67 名 - Genome biology 2019 被引用: 482

  6. Using Dali for Protein Structure Comparison

    著者: Liisa Holm - Methods in molecular biology 2020 被引用: 673

  7. DALI and the persistence of protein shape

    著者: Liisa Holm - Protein Science 2019 被引用: 770

  8. Dali server: conservation mapping in 3D

    著者: Liisa Holm, Päivi Rosenström - Nucleic Acids Research, Nucleic Acids Res. 2010 被引用: 3,732

  9. PANNZER2: a rapid functional annotation web server

    著者: Petri Törönen, Alan Medlar, Liisa Holm - Nucleic Acids Research, Nucleic Acids Res. 2018 被引用: 578

  10. The Pfam protein families database

    著者: Marco Punta, Penny C. Coggill, Ruth Y. Eberhardt, Jaina Mistry, John G. Tate, Chris Boursnell, Ningze Pang, Kristoffer Forslund, Goran Ceric, Jody Clements, Andreas Heger, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman, Robert D. Finn - Nucleic Acids Research, Nucleic Acids Res. 2011 被引用: 3,780

  11. PANNZER—A practical tool for protein function prediction

    著者: Petri Törönen, Liisa Holm - Protein Science 2021 被引用: 217

  12. An expanded evaluation of protein function prediction methods shows an improvement in accuracy

    著者: Yuxiang Jiang, Tal Oron, Wyatt T. Clark, Asma Bankapur, Daniel D’Andrea, Rosalba Lepore, Christopher S. Funk, Indika Kahanda, Karin Verspoor, Asa Ben‐Hur, Da Chen Emily Koo, Duncan Penfold-Brown, Dennis Shasha, Noah Youngs, Richard Bonneau, Alexandra J. Lin, Sayed Mohammad Ebrahim Sahraeian, Pier Luigi Martelli, Giuseppe Profiti, Rita Casadio, Renzhi Cao, Zhaolong Zhong, Jianlin Cheng, Adrian Altenhoff, Nives Škunca, Christophe Dessimoz, Tunca Doğan, Kai Hakala, Suwisa Kaewphan, Farrokh Mehryary, Tapio Salakoski, Filip Ginter, Hai Fang, Ben Smithers, Matt E. Oates, Julian Gough, Petri Törönen, Patrik Koskinen, Liisa Holm, Ching-Tai Chen, Wen−Lian Hsu, Kevin Bryson, Domenico Cozzetto, Federico Minneci, David T. Jones, Samuel Chapman, Dukka Bkc, Ishita Khan, Daisuke Kihara, Dan Ofer, Nadav Rappoport, Amos Stern, Elena Cibrián–Uhalte, Paul Denny, Rebecca E. Foulger, Reija Hieta, Duncan Legge, Ruth C. Lovering, Michele Magrane, Anna N. Melidoni, Prudence Mutowo, Klemens Pichler, Aleksandra Shypitsyna, Biao Li, Pooya Zakeri, Sarah ElShal, Léon-Charles Tranchevent, Sayoni Das, Natalie L. Dawson, David Lee, Jonathan Lees, Ian Sillitoe, Prajwal Bhat, Tamás Nepusz, Alfonso E. Romero, Rajkumar Sasidharan, Haixuan Yang, Alberto Paccanaro, Jesse Gillis, Adriana E. Sedeño-Cortés, Paul Pavlidis, Shou Feng, Juan Miguel Cejuela, Tatyana Goldberg, Tobias Hamp, Lothar Richter, Asaf Salamov, Toni Gabaldón, Marina Marcet‐Houben, Fran Supek, Qingtian Gong, Wei Ning, Yuanpeng Zhou, Weidong Tian, Marco Falda, Paolo Fontana, Enrico Lavezzo, Stefano Toppo, Carlo Ferrari, Manuel Giollo ほか 47 名 - Genome biology 2016 被引用: 452

  13. Dali server update

    著者: Liisa Holm, Laura M. Laakso - Nucleic Acids Research, Nucleic Acids Res. 2016 被引用: 939

  14. The Pfam protein families database

    著者: Robert D. Finn, Jaina Mistry, John G. Tate, Penny C. Coggill, Andreas Heger, Joanne E. Pollington, O. Luke Gavin, Prasad Gunasekaran, Goran Ceric, Kristoffer Forslund, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman - Nucleic Acids Research, Nucleic Acids Res. 2009 被引用: 2,724

  15. Atlas of nonribosomal peptide and polyketide biosynthetic pathways reveals common occurrence of nonmodular enzymes

    著者: Hao Wang, David P. Fewer, Liisa Holm, Leo Rouhiainen, Kaarina Sivonen - National Academy of Sciences, Proceedings of the National Academy of Sciences 2014 被引用: 360

  16. Protein Structure Comparison by Alignment of Distance Matrices

    著者: Liisa Holm, Chris Sander - Journal of Molecular Biology 1993 被引用: 3,995

  17. Dali: a network tool for protein structure comparison

    著者: Liisa Holm, Chris Sander - Trends in Biochemical Sciences 1995 被引用: 1,477

  18. Defense‐related transcription factors WRKY70 and WRKY54 modulate osmotic stress tolerance by regulating stomatal aperture in Arabidopsis

    著者: Jing Li, Sébastien Besseau, Petri Törönen, Nina Sipari, Hannes Kollist, Liisa Holm, E. Tapio Palva - New Phytologist 2013 被引用: 301

  19. Searching protein structure databases with DaliLite v.3

    著者: Liisa Holm, S. Kääriäinen, Päivi Rosenström, A. Schenkel - Bioinformatics, Bioinform. 2008 被引用: 1,031

  20. Oncolytic Adenovirus Coding for Granulocyte Macrophage Colony-Stimulating Factor Induces Antitumoral Immunity in Cancer Patients

    著者: Vincenzo Cerullo, Sari Pesonen, Iulia Diaconu, Sophie Escutenaire, Petteri T. Arstila, Matteo Ugolini, Petri Nokisalmi, Mari Raki, Leena Laasonen, Merja Särkioja, Maria Rajecki, Lotta Kangasniemi, Kilian Guse, Andreas Helminen, Laura Ahtiainen, Ari Ristimäki, Anne Räisänen‐Sokolowski, Elina Haavisto, Minna Oksanen, Eerika Karli, Aila Karioja‐Kallio, Liisa Holm, Mauri Kouri, Timo Joensuu, Anna Kanerva, Akseli Hemminki - Cancer Research 2010 被引用: 227

  21. Treatment of Cancer Patients With a Serotype 5/3 Chimeric Oncolytic Adenovirus Expressing GMCSF

    著者: Anniina Koski, Lotta Kangasniemi, Sophie Escutenaire, Sari Pesonen, Vincenzo Cerullo, Iulia Diaconu, Petri Nokisalmi, Mari Raki, Maria Rajecki, Kilian Guse, Tuuli Ranki, Minna Oksanen, Liisa Holm, Elina Haavisto, Aila Karioja‐Kallio, Leena Laasonen, Kaarina Partanen, Matteo Ugolini, Andreas Helminen, Eerika Karli, Päivi Hannuksela, Saila K. Pesonen, Timo Joensuu, Anna Kanerva, Akseli Hemminki - Molecular Therapy 2010 被引用: 251

  22. The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

    著者: Naihui Zhou, Yuxiang Jiang, Timothy Bergquist, Alexandra Lee, Balint Z Kacsoh, Alex W. Crocker, Kimberley A. Lewis, George P. Georghiou, Huy Nguyen, Md-Nafiz Hamid, L. Taylor Davis, Tunca Doğan, Volkan Atalay, Ahmet Süreyya Rifaioğlu, Alperen Dalkıran, Rengül Çetin-Atalay, Chengxin Zhang, Rebecca L. Hurto, Peter L. Freddolino, Yang Zhang, Prajwal Bhat, Fran Supek, José M. Fernández, Branislava Gemović, Vladimir Perović, Radoslav Davidović, Neven Šumonja, Nevena Veljković, Ehsaneddin Asgari, Mohammad RK Mofrad, Giuseppe Profiti, Castrense Savojardo, Pier Luigi Martelli, Rita Casadio, Florian Boecker, Indika Kahanda, Natalie Thurlby, Alice C. McHardy, Alexandre Renaux, Rabie Saidi, Julian Gough, Alex A. Freitas, Magdalena Antczak, Fábio Fabris, Mark N. Wass, Jie Hou, Jianlin Cheng, Jie Hou, Zheng Wang, Alfonso E. Romero, Alberto Paccanaro, Haixuan Yang, Tatyana Goldberg, Chenguang Zhao, Liisa Holm, Petri Törönen, Alan Medlar, Elaine Zosa, Itamar Borukhov, Ilya B. Novikov, Angela D. Wilkins, Olivier Lichtarge, Po-Han Chi, Wei-Cheng Tseng, Michal Linial, Peter W. Rose, Christophe Dessimoz, Vedrana Vidulin, Sašo Džeroski, Ian Sillitoe, Sayoni Das, Jonathan Lees, David T. Jones, Cen Wan, Domenico Cozzetto, Rui Fa, Mateo Torres, Alex Wiarwick Vesztrocy, José Manuel Rodrı́guez, Michael L. Tress, Marco Frasca, Marco Notaro, Giuliano Grossi, Alessandro Petrini, Matteo Ré, Giorgio Valentini, Marco Mesiti, Daniel B. Roche, Jonas Reeb, David W. Ritchie, Sabeur Aridhi, Seyed Ziaeddin Alborzi, Marie‐Dominique Devignes, Da Chen Emily Koo, Richard Bonneau, Vladimir Gligorijević, Meet Barot, Hai Fang, Stefano Toppo, Enrico Lavezzo ほか 68 名 - 2019 被引用: 64

  23. Global analysis of aging-related protein structural changes uncovers enzyme-polymerization-based control of longevity

    著者: Jurgita Paukštytė, Rosa María López Cabezas, Yuehan Feng, Kai Tong, Daniela Schnyder, Ellinoora Elomaa, Pavlína Gregorová, Matteo Doudin, Meeri Särkkä, Jesse Sarameri, Alice Lippi, Helena Vihinen, Juhana Juutila, Anni I. Nieminen, Petri Törönen, Liisa Holm, Eija Jokitalo, Anita Kriško, Juha T. Huiskonen, L. Peter Sarin, Ville Hietakangas, Paola Picotti, Yves Barral, Juha Saarikangas - Molecular Cell 2023 被引用: 34

  24. Benchmarking fold detection by DaliLite v.5

    著者: Liisa Holm - Bioinformatics, Bioinform. 2019 被引用: 339