John van der Oost
1991–2025 年に発表
- 147
- 論文数
- 42,878
- 被引用数
- 96
- h 指数
- 147
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology73.7%
- Environmental Science8.4%
- Agricultural and Biological Sciences5.4%
- Medicine4.6%
- Engineering2%
- Immunology and Microbiology1.1%
- その他4.8%
トピック
- CRISPR and Genetic Engineering17%
- RNA and protein synthesis mechanisms6%
- Advanced biosensing and bioanalysis techniques4.2%
- Bacteriophages and microbial interactions3.9%
- Bacterial Genetics and Biotechnology2.5%
- Genomics and Phylogenetic Studies2.3%
- その他64.1%
共著者
- Willem M. de Vos25
- Stan J. J. Brouns24
- Servé W. M. Kengen21
- Raymond H.J. Staals14
- Edze R. Westra12
- Eugene V. Koonin11
- Kira S. Makarova11
- Matthijs M. Jore11
- Prarthana Mohanraju11
- Daan C. Swarts10
- Nico J. Claassens9
- Ioannis Mougiakos8
- Ruud A. Weusthuis8
- Jennifer A. Doudna7
- Joyce H.G. Lebbink7
- Wen Y. Wu7
- Yifan Zhu7
- Adriaan H. Stouthamer6
- Arie B. Brinkman6
- Constantinos Patinios6
- Feng Zhang6
- Jorrit W. Hegge6
- Magnus Lundgren6
- Rob J. M. van Spanning6
全論文
- Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System
著者: Bernd Zetsche, Jonathan S. Gootenberg, Omar O. Abudayyeh, Ian M. Slaymaker, Kira S. Makarova, Patrick Essletzbichler, Sara E. Volz, Julia Joung, John van der Oost, Aviv Regev, Eugene V. Koonin, Feng Zhang - Cell 2015 被引用: 4,975
- Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants
著者: Kira S. Makarova, Yuri I. Wolf, Jaime Iranzo, Sergey Shmakov, Omer S. Alkhnbashi, Stan J. J. Brouns, Emmanuelle Charpentier, David R. Cheng, Daniel H. Haft, Philippe Horvath, Sylvain Moineau, Francisco J. M. Mojica, David Scott, Shiraz A. Shah, Virginijus Šikšnys, Michael P. Terns, Česlovas Venclovas, Malcolm F. White, Alexander F. Yakunin, Winston X. Yan, Feng Zhang, Roger A. Garrett, Rolf Backofen, John van der Oost, Rodolphe Barrangou, Eugene V. Koonin - Nature Reviews Microbiology 2019 被引用: 2,464
- An updated evolutionary classification of CRISPR–Cas systems
著者: Kira S. Makarova, Yuri I. Wolf, Omer S. Alkhnbashi, Fabrizio Costa, Shiraz A. Shah, Sita J. Saunders, Rodolphe Barrangou, Stan J. J. Brouns, Emmanuelle Charpentier, Daniel H. Haft, Philippe Horvath, Sylvain Moineau, Francisco J. M. Mojica, Rebecca M. Terns, Michael P. Terns, Malcolm F. White, Alexander F. Yakunin, Roger A. Garrett, John van der Oost, Rolf Backofen, Eugene V. Koonin - Nature Reviews Microbiology 2015 被引用: 2,570
- Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes
著者: Stan J. J. Brouns, Matthijs M. Jore, Magnus Lundgren, Edze R. Westra, Rik J. H. Slijkhuis, Ambrosius P. Snijders, Mark J. Dickman, Kira S. Makarova, Eugene V. Koonin, John van der Oost - Science 2008 被引用: 2,652
- Evolution and classification of the CRISPR–Cas systems
著者: Kira S. Makarova, Daniel H. Haft, Rodolphe Barrangou, Stan J. J. Brouns, Emmanuelle Charpentier, Philippe Horvath, Sylvain Moineau, Francisco J. M. Mojica, Yuri I. Wolf, Alexander F. Yakunin, John van der Oost, Eugene V. Koonin - Nature Reviews Microbiology 2011 被引用: 2,496
- Structural Basis for Guide RNA Processing and Seed-Dependent DNA Targeting by CRISPR-Cas12a
著者: Daan C. Swarts, John van der Oost, Martin Jínek - Molecular Cell 2017 被引用: 642
- Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome
著者: Víctor J. Carrión, Juan E. Pérez‐Jaramillo, Viviane Cordovez, Vittorio Tracanna, Mattias de Hollander, Daniel Ruiz-Buck, Lucas William Mendes, Wilfred F. J. van IJcken, Ruth Gomez-Exposito, Somayah S. Elsayed, Prarthana Mohanraju, Adini Qisthi Arifah, John van der Oost, Joseph N. Paulson, Rodrigo Mendes, Gilles P. van Wezel, Marnix H. Medema, Jos M. Raaijmakers - Science 2019 被引用: 1,190
- Multiplex gene editing by CRISPR–Cpf1 using a single crRNA array
著者: Bernd Zetsche, Matthias Heidenreich, Prarthana Mohanraju, Iana Fedorova, Jeroen Kneppers, Ellen M. DeGennaro, Nerges Winblad, Sourav Choudhury, Omar O. Abudayyeh, Jonathan S. Gootenberg, Wen Y. Wu, David Scott, Konstantin Severinov, John van der Oost, Feng Zhang - Nature Biotechnology 2016 被引用: 983
- Argonaute of the archaeon Pyrococcus furiosus is a DNA-guided nuclease that targets cognate DNA
著者: Daan C. Swarts, Jorrit W. Hegge, Ismael Hinojo, Masami Shiimori, M. A. Ellis, Justin Dumrongkulraksa, Rebecca M. Terns, Michael P. Terns, John van der Oost - Nucleic Acids Research 2015 被引用: 333
- Enhancement of CRISPR/Cas12a trans-cleavage activity using hairpin DNA reporters
著者: Marianna Rossetti, Rosa Merlo, Neda Bagheri, Danila Moscone, Anna Valenti, Aakash Saha, Pablo Arantes, Rudy Ippodrino, Francesco Ricci, Ida Treglia, Elisabetta Delibato, John van der Oost, Giulia Palermo, Giuseppe Perugino, Alessandro Porchetta - Nucleic Acids Research 2022 被引用: 159
- DNA-guided DNA interference by a prokaryotic Argonaute
著者: Daan C. Swarts, Matthijs M. Jore, Edze R. Westra, Yifan Zhu, Jorijn H. Janssen, Ambrosius P. Snijders, Yanli Wang, Dinshaw J. Patel, José Berenguer, Stan J. J. Brouns, John van der Oost - Nature 2014 被引用: 511
- The evolutionary journey of Argonaute proteins
著者: Daan C. Swarts, Kira S. Makarova, Yanli Wang, Kotaro Nakanishi, René F. Ketting, Eugene V. Koonin, Dinshaw J. Patel, John van der Oost - Nature Structural & Molecular Biology 2014 被引用: 572
- Codon Bias as a Means to Fine-Tune Gene Expression
著者: Tessa E. F. Quax, Nico J. Claassens, Dieter Söll, John van der Oost - Molecular Cell 2015 被引用: 831
- Healthy human gut phageome
著者: Pilar Manrique, Benjamin Bolduc, Seth T. Walk, John van der Oost, Willem M. de Vos, Mark Young - National Academy of Sciences, Proceedings of the National Academy of Sciences 2016 被引用: 566
- Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems
著者: Prarthana Mohanraju, Kira S. Makarova, Bernd Zetsche, Feng Zhang, Eugene V. Koonin, John van der Oost - Science 2016 被引用: 701
- DNA-guided DNA cleavage at moderate temperatures by Clostridium butyricum Argonaute
著者: Jorrit W. Hegge, Daan C. Swarts, Stanley D. Chandradoss, Tao Cui, Jeroen Kneppers, Martin Jínek, Chirlmin Joo, John van der Oost - Nucleic Acids Research 2019 被引用: 211
- The miniature CRISPR-Cas12m effector binds DNA to block transcription
著者: Wen Y. Wu, Prarthana Mohanraju, Chunyu Liao, Belén Adiego-Pérez, Sjoerd C.A. Creutzburg, Kira S. Makarova, Karlijn Keessen, Timon A. Lindeboom, Tahseen S. Khan, Stijn H. P. Prinsen, Rob Joosten, Winston X. Yan, Anzhela Migur, Charlie Laffeber, David Scott, Joyce H.G. Lebbink, Eugene V. Koonin, Chase L. Beisel, John van der Oost - Molecular Cell 2022 被引用: 100
- Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage
著者: Gang Sheng, Hongtu Zhao, Jiuyu Wang, Yu Rao, Wenwen Tian, Daan C. Swarts, John van der Oost, Dinshaw J. Patel, Yanli Wang - National Academy of Sciences, Proceedings of the National Academy of Sciences 2013 被引用: 279
- Highly specific enrichment of rare nucleic acid fractions using Thermus thermophilus argonaute with applications in cancer diagnostics
著者: Jinzhao Song, Jorrit W. Hegge, Michael G. Mauk, Junman Chen, Jacob E. Till, Neha Bhagwat, Lotte T. Azink, Jing Peng, Moen Sen, Jazmine J. Mays, Erica L. Carpenter, John van der Oost, Haim H. Bau - Nucleic Acids Research 2019 被引用: 146
- The genome editing revolution
著者: John van der Oost, Constantinos Patinios - Trends in biotechnology 2023 被引用: 89
- Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements
著者: Kira S. Makarova, Yuri I. Wolf, John van der Oost, Eugene V. Koonin - Biology Direct 2009 被引用: 319
- Cryo-EM structure of the transposon-associated TnpB enzyme
著者: Ryoya Nakagawa, Hisato Hirano, Satoshi N. Omura, Suchita P. Nety, Soumya Kannan, Han Altae-Tran, Yao Xiao, Yuriko Sakaguchi, Takayuki Ohira, Wen Y. Wu, Hiroshi Nakayama, Yutaro Shuto, Tatsuki Tanaka, Fumiya K. Sano, Tsukasa Kusakizako, Yoshiaki Kise, Yuzuru Itoh, Naoshi Dohmae, John van der Oost, Tsutomu Suzuki, Feng Zhang, Osamu Nureki - Nature 2023 被引用: 99
- Prokaryotic Argonaute proteins: novel genome-editing tools?
著者: Jorrit W. Hegge, Daan C. Swarts, John van der Oost - Nature Reviews Microbiology 2017 被引用: 210
- Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence
著者: Ekaterina Semenova, Matthijs M. Jore, Kirill A. Datsenko, А. В. Семенова, Edze R. Westra, Barry L. Wanner, John van der Oost, Stan J. J. Brouns, Konstantin Severinov - National Academy of Sciences, Proceedings of the National Academy of Sciences 2011 被引用: 781
