Marnix H. Medema
1993–2026 年に発表
- 133
- 論文数
- 36,757
- 被引用数
- 72
- h 指数
- 117
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology35.1%
- Medicine29.6%
- Agricultural and Biological Sciences16.2%
- Environmental Science10.1%
- Immunology and Microbiology2.3%
- Computer Science2.1%
- その他4.6%
トピック
- Microbial Natural Products and Biosynthesis11.6%
- Genomics and Phylogenetic Studies8.1%
- Microbial Community Ecology and Physiology4%
- Gut microbiota and health3.6%
- Plant-Microbe Interactions and Immunity3.5%
- Plant Pathogens and Fungal Diseases2.7%
- その他66.5%
共著者
- Justin J. J. van der Hooft27
- Kai Blin25
- Tilmann Weber22
- Gilles P. van Wezel19
- Hannah E. Augustijn15
- Eriko Takano14
- Michael A. Fischbach14
- Satria A. Kautsar14
- Barbara R. Terlouw13
- Rainer Breitling11
- Jos M. Raaijmakers9
- David Meijer8
- Mohammad Alanjary8
- Pieter C. Dorrestein8
- Zachary L. Reitz8
- Friederike Biermann7
- Eric J. N. Helfrich6
- Jeffrey A. van Santen6
- Jorge C. Navarro-Muñoz6
- Marc G. Chevrette6
- Nadine Ziemert6
- Simon Shaw6
- Somayah S. Elsayed6
- Victòria Andreu6
全論文
- antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
著者: Kai Blin, Simon Shaw, Hannah E. Augustijn, Zachary L. Reitz, Friederike Biermann, Mohammad Alanjary, Artem Fetter, Barbara R. Terlouw, William W. Metcalf, Eric J. N. Helfrich, Gilles P. van Wezel, Marnix H. Medema, Tilmann Weber - Nucleic Acids Research, Nucleic Acids Res. 2023 被引用: 2,233
- antiSMASH 6.0: improving cluster detection and comparison capabilities
著者: Kai Blin, Simon Shaw, Alexander M. Kloosterman, Zachary Charlop-Powers, Gilles P. van Wezel, Marnix H. Medema, Tilmann Weber - Nucleic Acids Research, Nucleic Acids Res. 2021 被引用: 2,678
- Towards the sustainable discovery and development of new antibiotics
著者: Marcus Miethke, Marco Pieroni, Tilmann Weber, Mark Brönstrup, Peter Hammann, Ludovic Halby, Paola B. Arimondo, Philippe Glaser, Bertrand Aigle, Helge B. Bode, Rui Moreira, Yanyan Li, Andriy Luzhetskyy, Marnix H. Medema, Jean‐Luc Pernodet, Marc Stadler, José R. Tormo, Olga Genilloud, Andrew W. Truman, Kira J. Weissman, Eriko Takano, Stefano Sabatini, Evi Stegmann, Heike Brötz‐Oesterhelt, Wolfgang Wohlleben, Myriam Seemann, Martin Empting, Anna K. H. Hirsch, Brigitta Loretz, Claus‐Michael Lehr, Alexander Titz, Jennifer Herrmann, Timo Jaeger, Silke Alt, Thomas Hesterkamp, Mathias Winterhalter, Andrea Schiefer, Kenneth Pfarr, Achim Hoerauf, Heather Graz, Michael Graz, Mika Lindvall, Savithri Ramurthy, Anders Karlén, Maarten van Dongen, Hrvoje Petković, Andreas Keller, Frédéric Peyrane, Stefano Donadio, Laurent Fraisse, Laura J. V. Piddock, Ian H. Gilbert, Heinz E. Moser, Rolf Müller - Nature Reviews Chemistry 2021 被引用: 1,155
- Artificial intelligence for natural product drug discovery
著者: Michael W. Mullowney, Katherine Duncan, Somayah S. Elsayed, Neha Garg, Justin J. J. van der Hooft, Nathaniel I. Martin, David Meijer, Barbara R. Terlouw, Friederike Biermann, Kai Blin, Janani Durairaj, Marina Gorostiola González, Eric J. N. Helfrich, Florian Huber, Stefan Leopold‐Messer, Kohulan Rajan, Tristan de Rond, Jeffrey A. van Santen, Maria Sorokina, Marcy J. Balunas, Mehdi A. Beniddir, Doris A. van Bergeijk, Laura M. Carroll, Chase M. Clark, Djork-Arné Clevert, Chris A. Dejong, Chao Du, Scarlet Ferrinho, Francesca Grisoni, Albert Hofstetter, Willem Jespers, Olga V. Kalinina, Satria A. Kautsar, Hyun Woo Kim, Tiago Leão, Joleen Masschelein, Evan Rees, Raphael Reher, Daniel Reker, Philippe Schwaller, Marwin Segler, Michael A. Skinnider, Allison S. Walker, Egon Willighagen, Barbara Zdrazil, Nadine Ziemert, Rebecca J. M. Goss, Pierre Guyomard, Andrea Volkamer, William H. Gerwick, Hyun Uk Kim, Rolf Müller, Gilles P. van Wezel, Gerard J. P. van Westen, Anna K. H. Hirsch, Roger G. Linington, Serina L. Robinson, Marnix H. Medema - Nature Reviews Drug Discovery 2023 被引用: 390
- A computational framework to explore large-scale biosynthetic diversity
著者: Jorge C. Navarro-Muñoz, Nelly Sélem‐Mójica, Michael W. Mullowney, Satria A. Kautsar, James H. Tryon, Elizabeth I. Parkinson, Emmanuel L. C. de los Santos, Marley Yeong, Pablo Cruz‐Morales, Sahar Abubucker, Arne Roeters, Wouter Lokhorst, Antonio Fernàndez-Guerra, Luciana Teresa Dias Cappelini, Anthony W. Goering, Regan J. Thomson, William W. Metcalf, Neil L. Kelleher, Francisco Barona‐Gómez, Marnix H. Medema - Nature Chemical Biology 2019 被引用: 1,053
- MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters
著者: Barbara R. Terlouw, Kai Blin, Jorge C. Navarro-Muñoz, Nicole E. Avalon, Marc G. Chevrette, Susan Egbert, Sang Hyeon Lee, David Meijer, Michael J. J. Recchia, Zachary L. Reitz, Jeffrey A. van Santen, Nelly Sélem‐Mójica, Thomas Tørring, Liana Zaroubi, Mohammad Alanjary, Gajender Aleti, César Aguilar, Suhad A. A. Al-Salihi, Hannah E. Augustijn, J. Abraham Avelar‐Rivas, Luis Alfredo Avitia-Dominguez, Francisco Barona‐Gómez, Jordan Bernaldo-Agüero, Vincent A. Bielinski, Friederike Biermann, Thomas Booth, Víctor J. Carrión, Raquel Castelo‐Branco, Fernanda O. Chagas, Pablo Cruz‐Morales, Chao Du, Katherine Duncan, Athina Gavriilidou, Damien Gayrard, Karina Gutiérrez-García, Kristina Haslinger, Eric J. N. Helfrich, Justin J. J. van der Hooft, AFIF PRANAYA JATI, Edward Kalkreuter, Nikolaos Kalyvas, Kyo Bin Kang, Satria A. Kautsar, Wonyong Kim, Aditya M. Kunjapur, Yong‐Xin Li, Geng-Min Lin, Catarina Loureiro, Joris J. R. Louwen, Nico L L Louwen, George Lund, Jonathan Parra, Benjamin Philmus, Bita Pourmohsenin, Lotte J. U. Pronk, Adriana Rego, Rex Devasahayam Arokia Balaya, Serina L. Robinson, Luis Rodrigo Rosas-Becerra, Eve Tallulah Roxborough, Michelle Schorn, Darren Scobie, Kumar Saurabh Singh, Nika Sokolova, Xiaoyu Tang, Daniel Udwary, Aruna Vigneshwari, Kristiina Vind, Sophie P. J. M. Vromans, Valentin Waschulin, Sam E. Williams, Jaclyn M. Winter, Thomas E. Witte, Huali Xie, Dong Yang, Jingwei Yu, Mitja M. Zdouc, Zheng Zhong, Jérôme Collemare, Roger G. Linington, Tilmann Weber, Marnix H. Medema - Nucleic Acids Research, Nucleic Acids Res. 2022 被引用: 453
- Structure and function of the global topsoil microbiome
著者: Mohammad Bahram, Falk Hildebrand, Sofia K. Forslund, Jennifer Anderson, Nadejda A. Soudzilovskaia, Peter M. van Bodegom, Johan Bengtsson‐Palme, Sten Anslan, Luís Pedro Coelho, Helery Harend, Jaime Huerta‐Cepas, Marnix H. Medema, Mia R. Maltz, Sunil Mundra, Pål Axel Olsson, Mari Pent, Sergei Põlme, Shinichi Sunagawa, Martin Ryberg, Leho Tedersoo, Peer Bork - Nature 2018 被引用: 2,597
- antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
著者: Marnix H. Medema, Kai Blin, Peter Cimermancic, Victor de Jager, Piotr Zakrzewski, Michael A. Fischbach, Tilmann Weber, Eriko Takano, Rainer Breitling - Nucleic Acids Research, Nucleic Acids Res. 2011 被引用: 2,047
- antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
著者: Kai Blin, Simon Shaw, Katharina Steinke, Rasmus Villebro, Nadine Ziemert, Sang Yup Lee, Marnix H. Medema, Tilmann Weber - Nucleic Acids Research, Nucleic Acids Res. 2019 被引用: 3,118
- Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome
著者: Víctor J. Carrión, Juan E. Pérez‐Jaramillo, Viviane Cordovez, Vittorio Tracanna, Mattias de Hollander, Daniel Ruiz-Buck, Lucas William Mendes, Wilfred F. J. van IJcken, Ruth Gomez-Exposito, Somayah S. Elsayed, Prarthana Mohanraju, Adini Qisthi Arifah, John van der Oost, Joseph N. Paulson, Rodrigo Mendes, Gilles P. van Wezel, Marnix H. Medema, Jos M. Raaijmakers - Science 2019 被引用: 1,190
- Influence of the microbiome, diet and genetics on inter-individual variation in the human plasma metabolome
著者: Lianmin Chen, Daria V. Zhernakova, Alexander Kurilshikov, Sergio Andreu‐Sánchez, Daoming Wang, Hannah E. Augustijn, Arnau Vich Vila, Lifelines Cohort Study, Rinse K. Weersma, Marnix H. Medema, Mihai G. Netea, Folkert Kuipers, Cisca Wijmenga, Alexandra Zhernakova, Jingyuan Fu - Nature Medicine 2022 被引用: 310
- Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes
著者: Athina Gavriilidou, Satria A. Kautsar, Nestor Zaburannyi, Daniel Krug, Rolf Müller, Marnix H. Medema, Nadine Ziemert - Nature Microbiology 2022 被引用: 347
- Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
著者: Peter Cimermančič, Marnix H. Medema, Jan Claesen, Kenji L. Kurita, Laura C. Brown, Konstantinos Mavrommatis, Amrita Pati, Paul A. Godfrey, Michael Koehrsen, Jon Clardy, Bruce W. Birren, Eriko Takano, Andrej Šali, Roger G. Linington, Michael A. Fischbach - Cell 2014 被引用: 1,020
- Mining genomes to illuminate the specialized chemistry of life
著者: Marnix H. Medema, Tristan de Rond, Bradley S. Moore - Nature Reviews Genetics 2021 被引用: 250
- Ecology and genomics of Actinobacteria: new concepts for natural product discovery
著者: Doris A. van Bergeijk, Barbara R. Terlouw, Marnix H. Medema, Gilles P. van Wezel - Nature Reviews Microbiology 2020 被引用: 460
- MIBiG 2.0: a repository for biosynthetic gene clusters of known function
著者: Satria A. Kautsar, Kai Blin, Simon Shaw, Jorge C. Navarro-Muñoz, Barbara R. Terlouw, Justin J. J. van der Hooft, Jeffrey A. van Santen, Vittorio Tracanna, Hernando G. Suarez Duran, Victòria Pascal Andreu, Nelly Sélem-Mojica, Mohammad Alanjary, Serina L. Robinson, George Lund, Samuel C. Epstein, Ashley C. Sisto, Louise K. Charkoudian, Jérôme Collemare, Roger G. Linington, Tilmann Weber, Marnix H. Medema - Nucleic Acids Research, Nucleic Acids Res. 2019 被引用: 620
- Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
著者: Derek M. Bickhart, Mikhail Kolmogorov, Elizabeth Tseng, Daniel M. Portik, Anton Korobeynikov, Ivan Tolstoganov, Gherman Uritskiy, Ivan Liachko, Shawn Sullivan, Sung Bong Shin, Alvah Zorea, Victòria Andreu, Kevin Panke-Buisse, Marnix H. Medema, Itzhak Mizrahi, Pavel A. Pevzner, Timothy P. L. Smith - Nature Biotechnology 2022 被引用: 234
- Minimum Information about a Biosynthetic Gene cluster
著者: Marnix H. Medema, Renzo Kottmann, Pelin Yilmaz, Matthew Cummings, John Biggins, Kai Blin, Irene de Bruijn, Yit‐Heng Chooi, Jan Claesen, Roger Coates, Pablo Cruz‐Morales, Srikanth Duddela, Stephanie Düsterhus, Daniel Edwards, David P. Fewer, Neha Garg, Christoph Geiger, Juan Pablo Gomez‐Escribano, Anja Greule, Michalis Hadjithomas, Anthony S. Haines, Eric J. N. Helfrich, Matthew L. Hillwig, Keishi Ishida, Adam C. Jones, Carla S. Jones, Katrin Jungmann, Carsten Kegler, Hyun Uk Kim, Peter Kötter, Daniel Krug, Joleen Masschelein, Alexey V. Melnik, Simone M. Mantovani, Emily A. Monroe, Marcus A. Moore, Nathan A. Moss, Hans‐Wilhelm Nützmann, Guohui Pan, Amrita Pati, Daniel Petras, F. Jerry Reen, Federico Rosconi, Zhe Rui, Zhenhua Tian, Nicholas J. Tobias, Yuta Tsunematsu, Philipp Wiemann, Elizabeth E. Wyckoff, Xiaohui Yan, Grace Yim, Fengan Yu, Yunchang Xie, Bertrand Aigle, Alexander K. Apel, Carl J. Balibar, Emily P. Balskus, Francisco Barona‐Gómez, Andreas Bechthold, Helge B. Bode, Rainer Borriss, Sean F. Brady, Axel A. Brakhage, Patrick Caffrey, Yi‐Qiang Cheng, Jon Clardy, Russell J. Cox, René De Mot, Stefano Donadio, Mohamed S. Donia, Wilfred A. van der Donk, Pieter C. Dorrestein, Seán Doyle, Arnold J. M. Driessen, Monika Ehling‐Schulz, Karl-Dieter Entian, Michael A. Fischbach, Lena Gerwick, William H. Gerwick, Harald Gross, Bertolt Gust, Christian Hertweck, Monica Höfte, Susan E. Jensen, Jianhua Ju, Leonard Katz, Leonard Kaysser, Jonathan L. Klassen, Nancy P. Keller, Ján Kormanec, Oscar P. Kuipers, Tomohisa Kuzuyama, Nikos C. Kyrpides, Hyung-Jin Kwon, Sylvie Lautru, Rob Lavigne, Chia Y. Lee, Linquan Bai, Xinyu Liu, Wen Liu ほか 54 名 - Nature Chemical Biology 2015 被引用: 908
- MolNetEnhancer: Enhanced Molecular Networks by Integrating Metabolome Mining and Annotation Tools
著者: Madeleine Ernst, Kyo Bin Kang, Andrés Mauricio Caraballo‐Rodríguez, Louis‐Félix Nothias, Joe Wandy, Christopher S. Chen, Mingxun Wang, Simon Rogers, Marnix H. Medema, Pieter C. Dorrestein, Justin J. J. van der Hooft - Metabolites 2019 被引用: 382
- The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery
著者: Jeffrey A. van Santen, Grégoire Jacob, Amrit Leen Singh, Victor Aniebok, Marcy J. Balunas, Derek Bunsko, Fausto Carnevale Neto, Laia Castaño-Espriu, Chen Chang, Trevor N. Clark, Jessica Little, David A. Delgadillo, Pieter C. Dorrestein, Katherine Duncan, Joseph M. Egan, Melissa M. Galey, F. P. Jake Haeckl, Alex Hua, Alison H. Hughes, Dasha Iskakova, Aswad Khadilkar, Jung-Ho Lee, Sang Hyeon Lee, Nicole LeGrow, Dennis Y. Liu, Jocelyn M. Macho, Catherine S. McCaughey, Marnix H. Medema, Ram P. Neupane, Timothy J. O’Donnell, Jasmine S. Paula, Laura M. Sanchez, Anam F. Shaikh, Sylvia Soldatou, Barbara R. Terlouw, Tuan Anh Tran, Mercia C. Valentine, Justin J. J. van der Hooft, Duy A. Vo, Mingxun Wang, Darryl M. Wilson, Katherine E. Zink, Roger G. Linington - ACS Central Science 2019 被引用: 440
- cblaster: a remote search tool for rapid identification and visualization of homologous gene clusters
著者: Cameron L. M. Gilchrist, Thomas Booth, Bram van Wersch, Liana van Grieken, Marnix H. Medema, Yit‐Heng Chooi - Bioinformatics Advances 2021 被引用: 288
- BiG-FAM: the biosynthetic gene cluster families database
著者: Satria A. Kautsar, Kai Blin, Simon Shaw, Tilmann Weber, Marnix H. Medema - Nucleic Acids Research, Nucleic Acids Res. 2020 被引用: 259
- gutSMASH predicts specialized primary metabolic pathways from the human gut microbiota
著者: Victòria Andreu, Hannah E. Augustijn, Lianmin Chen, Alexandra Zhernakova, Jingyuan Fu, Michael A. Fischbach, Dylan Dodd, Marnix H. Medema - Nature Biotechnology 2023 被引用: 126
- A widely distributed gene cluster compensates for uricase loss in hominids
著者: Yuanyuan Liu, John B. Jarman, Yen Low, Hannah E. Augustijn, Steven K. Huang, Haoqing Chen, Mary E. DeFeo, Kazuma Sekiba, Bi‐Huei Hou, Xiandong Meng, Allison M. Weakley, Ashley V. Cabrera, Zhiwei Zhou, Gilles P. van Wezel, Marnix H. Medema, Calyani Ganesan, Alan C. Pao, Saurabh Gombar, Dylan Dodd - Cell 2023 被引用: 149
