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Mario Stanke

2003–2025 年に発表

62
論文数
28,706
被引用数
48
h 指数
56
i10 指数

被引用数

Mario Stanke の年別被引用数1979 年: 被引用 1 件1991 年: 被引用 2 件2000 年: 被引用 1 件2001 年: 被引用 1 件2004 年: 被引用 13 件2005 年: 被引用 16 件2006 年: 被引用 27 件2007 年: 被引用 69 件2008 年: 被引用 174 件2009 年: 被引用 203 件2010 年: 被引用 188 件2011 年: 被引用 213 件2012 年: 被引用 183 件2013 年: 被引用 218 件2014 年: 被引用 264 件2015 年: 被引用 241 件2016 年: 被引用 234 件2017 年: 被引用 228 件2018 年: 被引用 268 件2019 年: 被引用 907 件2020 年: 被引用 952 件2021 年: 被引用 973 件2022 年: 被引用 707 件2023 年: 被引用 524 件2024 年: 被引用 966 件2025 年: 被引用 372 件2026 年: 被引用 15 件1980〜1990 年は被引用が無いため表示していません1992〜1999 年は被引用が無いため表示していません2002〜2003 年は被引用が無いため表示していません

引用元

国・地域

この著者を引用した国・地域の世界地図アメリカ合衆国: 引用元論文 2,742 件、この内訳の 19.6%中国: 引用元論文 2,170 件、この内訳の 15.5%ドイツ: 引用元論文 954 件、この内訳の 6.8%イギリス: 引用元論文 946 件、この内訳の 6.8%フランス: 引用元論文 542 件、この内訳の 3.9%オーストラリア: 引用元論文 491 件、この内訳の 3.5%カナダ: 引用元論文 474 件、この内訳の 3.4%日本: 引用元論文 425 件、この内訳の 3%スペイン: 引用元論文 353 件、この内訳の 2.5%スイス: 引用元論文 283 件、この内訳の 2%デンマーク: 引用元論文 272 件、この内訳の 1.9%オランダ: 引用元論文 268 件、この内訳の 1.9%
0%19.6%その他 29.2%

機関

分野

  • Biochemistry, Genetics and Molecular Biology49.6%
  • Agricultural and Biological Sciences22%
  • Medicine8.9%
  • Immunology and Microbiology5.8%
  • Environmental Science4.4%
  • Neuroscience2.3%
  • その他7%

トピック

  • Genomics and Phylogenetic Studies10.2%
  • Chromosomal and Genetic Variations4%
  • Genetic diversity and population structure2.6%
  • Plant Pathogens and Fungal Diseases2.3%
  • RNA and protein synthesis mechanisms1.8%
  • Insect symbiosis and bacterial influences1.7%
  • その他77.4%

共著者

全論文

検索で開く
  1. AUGUSTUS: ab initio prediction of alternative transcripts

    著者: Mario Stanke, Oliver Keller, Irfan Gunduz, Alec Hayes, Stephan Waack, Burkhard Morgenstern - Nucleic Acids Research, Nucleic Acids Res. 2006 被引用: 3,000

  2. Using native and syntenically mapped cDNA alignments to improve de novo gene finding

    著者: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler - Bioinformatics, Bioinform. 2008 被引用: 2,599

  3. BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS

    著者: Katharina Jasmin Hoff, Simone Lange, Alexandre Lomsadze, Mark Borodovsky, Mario Stanke - Bioinformatics, Bioinform. 2015 被引用: 1,364

  4. Whole-Genome Annotation with BRAKER

    著者: Katharina J. Hoff, Alexandre Lomsadze, Mark Borodovsky, Mario Stanke - Methods in molecular biology 2019 被引用: 843

  5. AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints

    著者: Mario Stanke, Burkhard Morgenstern - Nucleic Acids Research, Nucleic Acids Res. 2005 被引用: 1,719

  6. Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources

    著者: Mario Stanke, Oliver Schöffmann, Burkhard Morgenstern, Stephan Waack - BMC Bioinformatics, BMC Bioinform. 2006 被引用: 1,441

  7. Gene prediction with a hidden Markov model and a new intron submodel

    著者: Mario Stanke, Stephan Waack - Bioinformatics, ECCB 2003 被引用: 1,763

  8. AUGUSTUS: a web server for gene finding in eukaryotes

    著者: Mario Stanke, Rasmus Steinkamp, Stephan Waack, Burkhard Morgenstern - Nucleic Acids Research, Nucleic Acids Res. 2004 被引用: 1,419

  9. Predicting Genes in Single Genomes with AUGUSTUS

    著者: Katharina J. Hoff, Mario Stanke - Current Protocols in Bioinformatics 2018 被引用: 420

  10. BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS, and TSEBRA

    著者: Lars Gabriel, Tomáš Brůna, Katharina J. Hoff, Matthis Ebel, Alexandre Lomsadze, Mark Borodovsky, Mario Stanke - Genome Research 2023 被引用: 556

  11. A novel hybrid gene prediction method employing protein multiple sequence alignments

    著者: Oliver Keller, Martin Kollmar, Mario Stanke, Stephan Waack - Bioinformatics, Bioinform. 2011 被引用: 627

  12. Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci

    著者: Jingtao Lilue, Anthony Doran, Ian T. Fiddes, Monica Abrudan, Joel Armstrong, Ruth Bennett, William Chow, Joanna Collins, Stephan C. Collins, Anne Czechanski, Petr Danecek, Mark Diekhans, Dirk-Dominik Dolle, Matt Dunn, Richard Durbin, Dent Earl, Anne C. Ferguson‐Smith, Paul Flicek, Jonathan Flint, Adam Frankish, Beiyuan Fu, Mark Gerstein, James Gilbert, Leo Goodstadt, Jennifer Harrow, Kerstin Howe, Ximena Ibarra-Soria, Mikhail Kolmogorov, Chris Lelliott, Darren W. Logan, Jane Loveland, Clayton E. Mathews, Richard Mott, Paul Muir, Stefanie Nachtweide, Fábio C. P. Navarro, Duncan T. Odom, Naomi Park, Sarah Pelan, Son Pham, Mike Quail, Laura G. Reinholdt, Lars Romoth, Lesley Shirley, Cristina Sisu, Marcela Sjöberg, Mario Stanke, Charles A. Steward, Mark Thomas, Glen Threadgold, David Thybert, James Torrance, Kim Wong, Jonathan Wood, Binnaz Yalcin, Fengtang Yang, David J. Adams, Benedict Paten, Thomas Keane - Nature Genetics 2018 被引用: 332

  13. The house spider genome reveals an ancient whole-genome duplication during arachnid evolution

    著者: Evelyn E. Schwager, Prashant P. Sharma, Thomas H. Clarke, Daniel J. Leite, Torsten Wierschin, Matthias Pechmann, Yasuko Akiyama‐Oda, Lauren A. Esposito, Jesper Bechsgaard, Trine Bilde, Alexandra D. Buffry, Hsu Chao, Huyen Dinh, HarshaVardhan Doddapaneni, Shannon Dugan, Cornelius Eibner, Cassandra G. Extavour, Peter Funch, Jessica E. Garb, Luis Baudouin Gonzalez, Vanessa L. González, Sam Griffiths‐Jones, Yi Han, Cheryl Y. Hayashi, Maarten Hilbrant, Daniel Hughes, Ralf Janßen, Sandra L. Lee, Ignacio Maeso, Shwetha C. Murali, Donna M. Muzny, Rodrigo Nunes da Fonseca, Christian Louis Bonatto Paese, Jiaxin Qu, Matthew Ronshaugen, Christoph Schomburg, Anna Schönauer, Angelika Stollewerk, Montserrat Torres-Oliva, Natascha Turetzek, Bram Vanthournout, John H. Werren, Carsten Wolff, Kim C. Worley, Gregor Bucher, Richard A. Gibbs, Jonathan A. Coddington, Hiroki Oda, Mario Stanke, Nadia A. Ayoub, Nikola-Michael Prpíc, Jean‐François Flot, Nico Posnien, Stephen Richards, Alistair P. McGregor - BMC Biology 2017 被引用: 492

  14. AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome

    著者: Mario Stanke, Ana Tzvetkova, Burkhard Morgenstern - Genome biology 2006 被引用: 340

  15. Large scale RNAi screen in Tribolium reveals novel target genes for pest control and the proteasome as prime target

    著者: Julia Ulrich, Van‐Anh Dao, Upalparna Majumdar, Christian Schmitt-Engel, Jonas Schwirz, Dorothea Schultheis, Nadi Ströhlein, Nicole Troelenberg, Daniela Großmann, Tobias Richter, Jürgen Dönitz, Lizzy Gerischer, Gérard Leboulle, Andreas Vilcinskas, Mario Stanke, Gregor Bucher - BMC Genomics 2015 被引用: 181

  16. BRAKER2: Automatic Eukaryotic Genome Annotation with GeneMark-EP+ and AUGUSTUS Supported by a Protein Database

    著者: Tomáš Brůna, Katharina J. Hoff, Alexandre Lomsadze, Mario Stanke, Mark Borodovsky - NAR Genomics and Bioinformatics 2020 被引用: 1,811

  17. The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology

    著者: Christian Schmitt-Engel, Dorothea Schultheis, Jonas Schwirz, Nadi Ströhlein, Nicole Troelenberg, Upalparna Majumdar, Van‐Anh Dao, Daniela Großmann, Tobias Richter, Maike Tech, Jürgen Dönitz, Lizzy Gerischer, Mirko Theis, Inga Schild, Jochen Trauner, Nikolaus Koniszewski, Elke Küster-Schöck, Sebastian Kittelmann, Yonggang Hu, Sabrina Lehmann, Janna Siemanowski, Julia Ulrich, Kristen A. Panfilio, Reinhard Schröder, Burkhard Morgenstern, Mario Stanke, Frank Buchhholz, Manfred Frasch, Siegfried Roth, Ernst A. Wimmer, Michael Schoppmeier, Martin Klingler, Gregor Bucher - Nature Communications 2015 被引用: 220

  18. Multi-Genome Annotation with AUGUSTUS

    著者: Stefanie Nachtweide, Mario Stanke - Methods in molecular biology 2019 被引用: 106

  19. Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote

    著者: Gerald Schönknecht, Wei‐Hua Chen, Chad M. Ternes, Guillaume G. Barbier, Roshan P. Shrestha, Mario Stanke, Andrea Bräutigam, Brett J. Baker, Jillian F. Banfield, R. Michael Garavito, Kevin M. Carr, Curtis G. Wilkerson, Stefan A. Rensing, David Gagneul, Nicholas E. Dickenson, Christine Oesterhelt, Martin J. Lercher, Andreas P.M. Weber - Science 2013 被引用: 511

  20. Wild tobacco genomes reveal the evolution of nicotine biosynthesis

    著者: Shuqing Xu, Thomas Brockmöller, Aura Navarro‐Quezada, Heiner Kuhl, Klaus Gase, Zhihao Ling, Wenwu Zhou, Christoph Kreitzer, Mario Stanke, Haibao Tang, Eric Lyons, Priyanka Pandey, Shree P. Pandey, Bernd Timmermann, Emmanuel Gaquerel, Ian T. Baldwin - National Academy of Sciences, Proceedings of the National Academy of Sciences 2017 被引用: 216

  21. Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics

    著者: Peter Arensburger, Karyn Mégy, Robert M. Waterhouse, Jenica Abrudan, Paolo Amedeo, Beatriz Antelo, Lyric C. Bartholomay, Shelby Bidwell, Elisabet Caler, Francisco Câmara Ferreira, Corey L. Campbell, Kathryn S. Campbell, Claudio Casola, Marta T. Castro, Ishwar Chandramouliswaran, Sinéad B. Chapman, Scott Christley, Javier Costas, Eric Eisenstadt, Cédric Feschotte, Claire M. Fraser, Roderic Guigó, Brian J. Haas, M. Hammond, Bill S. Hansson, Janet Hemingway, Sharon R. Hill, Clint Howarth, Rickard Ignell, Ryan Kennedy, Chinnappa D. Kodira, Neil F. Lobo, Chunhong Mao, George F. Mayhew, Kristin Michel, Akio Mori, Nannan Liu, Horacio Naveira, Vishvanath Nene, Nam Q. Nguyen, Matthew D. Pearson, Ellen J. Pritham, Daniela Puiu, Yumin Qi, Hilary Ranson, José M. C. Ribeiro, Hugh M. Roberston, David W. Severson, Martin Shumway, Mario Stanke, Robert L. Strausberg, Cheng Sun, Granger Sutton, Zhijian Tu, José M. C. Tubío, Maria Unger, Dana L. Vanlandingham, Albert J. Vilella, Owen White, Jared White, Charles S. Wondji, Jennifer R. Wortman, Evgeny M. Zdobnov, Bruce W. Birren, Bruce M. Christensen, Frank H. Collins, Anthony J. Cornel, George Dimopoulos, Linda I. Hannick, Stephen Higgs, Gregory C. Lanzaro, Daniel Lawson, Norman H. Lee, Marc A. T. Muskavitch, Alexander S. Raikhel, Peter W. Atkinson - Science 2010 被引用: 486

  22. Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

    著者: David Thybert, Maša Roller, Fábio C. P. Navarro, Ian T. Fiddes, Ian Streeter, Christine Feig, David Martín‐Gálvez, Mikhail Kolmogorov, Václav Janoušek, Wasiu Akanni, Bronwen Aken, Sarah Aldridge, Varshith Chakrapani, William Chow, Laura Clarke, Carla Cummins, Anthony Doran, Matthew Dunn, Leo Goodstadt, Kerstin Howe, Matthew Howell, Ambre-Aurore Josselin, Robert C. Karn, Christina M. Laukaitis, Lilue Jingtao, Fergal J. Martin, Matthieu Muffato, Stefanie Nachtweide, Michael A. Quail, Cristina Sisu, Mario Stanke, Klara Stefflova, Cock van Oosterhout, Frédéric Veyrunes, Ben J. Ward, Fengtang Yang, Golbahar Yazdanifar, Amonida Zadissa, David J. Adams, Alvis Brāzma, Mark Gerstein, Benedict Paten, Son Pham, Thomas Keane, Duncan T. Odom, Paul Flicek - Genome Research 2018 被引用: 135

  23. Genome Sequence of Aedes aegypti , a Major Arbovirus Vector

    著者: Vishvanath Nene, Jennifer R. Wortman, Daniel Lawson, Brian J. Haas, Chinnappa D. Kodira, Zhijian Tu, Brendan Loftus, Zhiyong Xi, Karyn Mégy, Manfred Grabherr, Quinghu Ren, Evgeny M. Zdobnov, Neil F. Lobo, Kathryn S. Campbell, Susan E. Brown, Maria F. Bonaldo, Jinsong Zhu, Steven P. Sinkins, David G. Hogenkamp, Paolo Amedeo, Peter Arensburger, Peter W. Atkinson, Shelby Bidwell, Jim Biedler, Ewan Birney, Robert V. Bruggner, Javier Costas, Monique R. Coy, Jonathan Crabtree, Matt Crawford, Becky deBruyn, David DeCaprio, Karin Eiglmeier, Eric Eisenstadt, Hamza A. El-Dorry, William M Gelbart, Suely Lopes Gomes, M. Hammond, Linda I. Hannick, James R. Hogan, Michael H. Holmes, David B. Jaffe, J. Spencer Johnston, Ryan Kennedy, Hyunwoo Koo, Saul Kravitz, Evgenia V. Kriventseva, David Kulp, Kurt LaButti, Eduardo Lee, Li Song, Diane D. Lovin, Chunhong Mao, Evan Mauceli, Carlos Frederico Martins Menck, Jason Miller, Philip Montgomery, Akio Mori, Ana L. T. O. Nascimento, Horacio Naveira, Chad Nusbaum, Sinéad B. O'Leary, Joshua Orvis, Mihaela Pertea, Hadi Quesneville, Kyanne R. Reidenbach, Yu-Hui Rogers, Charles W. Roth, Jennifer R. Schneider, Michael C. Schatz, Martin Shumway, Mario Stanke, E. O. Stinson, José M. C. Tubío, Janice P. VanZee, Sergio Verjovski‐Almeida, Doreen Werner, Owen White, Stefan Wyder, Qiandong Zeng, Qi Zhao, Yongmei Zhao, Catherine A. Hill, Alexander S. Raikhel, Marcelo B. Soares, D. L. Knudson, Norman H. Lee, James E. Galagan, Steven L. Salzberg, Ian T. Paulsen, George Dimopoulos, Frank H. Collins, Bruce Birren, Claire M. Fraser, David W. Severson - Science 2007 被引用: 1,123

  24. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea ( Coprinus cinereus )

    著者: Jason Stajich, Sarah K. Wilke, Dag Ahrén, Chun Hang Au, Bruce W. Birren, Mark Borodovsky, Claire Burns, Björn Canbäck, Lorna A. Casselton, Eric C. K. Cheng, Jixin Deng, Fred S. Dietrich, David C. Fargo, Mark Farman, Allen C. Gathman, Jonathan M. Goldberg, Roderic Guigó, Patrick J. Hoegger, James B. Hooker, Ashleigh Huggins, Timothy Y. James, Takashi Kamada, Sreedhar Kilaru, Chinnapa Kodira, Ursula Kües, Doris M. Kupfer, Hoi Shan Kwan, Alexandre Lomsadze, Weixi Li, Walt W. Lilly, Li‐Jun Ma, Aaron J. Mackey, Gerard Manning, Francis Martin, Hajime Muraguchi, Donald O. Natvig, Heather J Palmerini, Marilee A. Ramesh, Cathy J. Rehmeyer, Bruce A. Roe, Narmada Shenoy, Mario Stanke, Vardges Ter-Hovhannisyan, Anders Tunlid, Rajesh Velagapudi, Todd Vision, Qiandong Zeng, Miriam E. Zolan, Patricia J. Pukkila - National Academy of Sciences, Proceedings of the National Academy of Sciences 2010 被引用: 425