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Thomas D. Otto

1999–2025 年に発表

103
論文数
19,068
被引用数
65
h 指数
93
i10 指数

被引用数

Thomas D. Otto の年別被引用数1973 年: 被引用 1 件1987 年: 被引用 1 件1994 年: 被引用 1 件1999 年: 被引用 1 件2003 年: 被引用 3 件2004 年: 被引用 2 件2005 年: 被引用 5 件2006 年: 被引用 2 件2007 年: 被引用 1 件2008 年: 被引用 2 件2009 年: 被引用 11 件2010 年: 被引用 27 件2011 年: 被引用 71 件2012 年: 被引用 85 件2013 年: 被引用 156 件2014 年: 被引用 276 件2015 年: 被引用 287 件2016 年: 被引用 334 件2017 年: 被引用 276 件2018 年: 被引用 327 件2019 年: 被引用 790 件2020 年: 被引用 767 件2021 年: 被引用 788 件2022 年: 被引用 600 件2023 年: 被引用 407 件2024 年: 被引用 643 件2025 年: 被引用 257 件2026 年: 被引用 5 件1974〜1986 年は被引用が無いため表示していません1988〜1993 年は被引用が無いため表示していません1995〜1998 年は被引用が無いため表示していません2000〜2002 年は被引用が無いため表示していません

引用元

国・地域

この著者を引用した国・地域の世界地図アメリカ合衆国: 引用元論文 1,991 件、この内訳の 19%イギリス: 引用元論文 1,352 件、この内訳の 12.9%中国: 引用元論文 571 件、この内訳の 5.5%ドイツ: 引用元論文 515 件、この内訳の 4.9%フランス: 引用元論文 476 件、この内訳の 4.5%オーストラリア: 引用元論文 466 件、この内訳の 4.5%スイス: 引用元論文 324 件、この内訳の 3.1%カナダ: 引用元論文 283 件、この内訳の 2.7%スペイン: 引用元論文 264 件、この内訳の 2.5%ブラジル: 引用元論文 242 件、この内訳の 2.3%オランダ: 引用元論文 239 件、この内訳の 2.3%日本: 引用元論文 229 件、この内訳の 2.2%
0%19%その他 33.6%

機関

分野

  • Medicine40.3%
  • Biochemistry, Genetics and Molecular Biology34.4%
  • Immunology and Microbiology9.8%
  • Agricultural and Biological Sciences6.8%
  • Environmental Science3.7%
  • Computer Science1.6%
  • その他3.4%

トピック

  • Malaria Research and Control8.1%
  • Genomics and Phylogenetic Studies6.8%
  • Mosquito-borne diseases and control3.8%
  • Trypanosoma species research and implications3.2%
  • Research on Leishmaniasis Studies2.5%
  • RNA and protein synthesis mechanisms2%
  • その他73.6%

共著者

全論文

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  1. Distinct synovial tissue macrophage subsets regulate inflammation and remission in rheumatoid arthritis

    著者: Stefano Alivernini, Lucy MacDonald, Aziza Elmesmari, Samuel Finlay, Barbara Tolusso, Maria Rita Gigante, Luca Petricca, Clara Di Mario, Laura Bui, Simone Perniola, Moustafa Attar, Marco Gessi, Anna Laura Fedele, Sabarinadh Chilaka, Domenico Somma, Stephen N. Sansom, Andrew Filer, Charles McSharry, Neal L. Millar, Kristina Kirschner, Alessandra Nerviani, Myles Lewis, Costantino Pitzalis, Andrew R. Clark, Gianfranco Ferraccioli, Irina A. Udalova, Christopher D. Buckley, Elisa Gremese, Iain B. McInnes, Thomas D. Otto, Mariola Kurowska‐Stolarska - Nature Medicine 2020 被引用: 706

  2. Uncovering the essential genes of the human malaria parasite Plasmodium falciparum by saturation mutagenesis

    著者: Min Zhang, Chengqi Wang, Thomas D. Otto, Jenna Oberstaller, Xiangyun Liao, Swamy R. Adapa, Kenneth Udenze, Iraad F. Bronner, Deborah Casandra, Matthew Mayho, Jacqueline Brown, Suzanne Li, Justin Swanson, Julian C. Rayner, Rays H. Y. Jiang, John H. Adams - Science 2018 被引用: 1,025

  3. Circlator: automated circularization of genome assemblies using long sequencing reads

    著者: Martin Hunt, Nishadi De Silva, Thomas D. Otto, Julian Parkhill, Jacqueline A. Keane, Simon R. Harris - Genome biology 2015 被引用: 1,237

  4. A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers

    著者: Michael A. Quail, Miriam Smith, Paul Coupland, Thomas D. Otto, Simon R. Harris, Thomas R. Connor, Anna Bertoni, Harold Swerdlow, Yong Gu - BMC Genomics 2012 被引用: 2,052

  5. A novel multiple-stage antimalarial agent that inhibits protein synthesis

    著者: Beatriz Baragaña, Irene Hallyburton, Lee M, Neil R. Norcross, Raffaella Grimaldi, Thomas D. Otto, William R. Proto, Andrew M. Blagborough, Stephan Meister, Grennady Wirjanata, Andrea Ruecker, Leanna M. Upton, Tara S. Abraham, Mariana Justino de Almeida, Anupam Pradhan, Achim Porzelle, Maria Santos Martínez, Judith M. Bolscher, Andrew Woodland, Torsten Luksch, Suzanne Norval, Fabio Zuccotto, John Thomas, Frederick R. C. Simeons, Laste Stojanovski, Maria Osuna‐Cabello, Paddy M. Brock, Tom S. Churcher, Katarzyna Sala, Sara E. Zakutansky, Marı́a Belén Jiménez-Dı́az, Laura M. Sanz, Jennifer Riley, Rajshekhar Basak, Michael G. Campbell, Vicky M. Avery, Robert W. Sauerwein, Koen J. Dechering, Rintis Noviyanti, Brice Campo, Julie A. Frearson, Íñigo Angulo‐Barturen, Santiago Ferrer, Francisco‐Javier Gamo, Paul G. Wyatt, Didier Leroy, Peter K. S. Siegl, Michael J. Delves, Dennis E. Kyle, Sergio Wittlin, Jutta Marfurt, Ric N. Price, Robert E. Sinden, Elizabeth A. Winzeler, Susan A. Charman, Lidiya Bebrevska, David W. Gray, Simon F. Campbell, Alan H. Fairlamb, Paul Willis, Julian C. Rayner, David A. Fidock, Kevin D. Read, Ian H. Gilbert - Nature 2015 被引用: 465

  6. A cascade of DNA-binding proteins for sexual commitment and development in Plasmodium

    著者: Abhinav Sinha, Katie R. Hughes, Katarzyna Modrzynska, Thomas D. Otto, Claudia Pfander, Nicholas J. Dickens, Agnieszka A. Religa, Ellen Bushell, Anne Graham, Rachael Cameron, Björn F.C. Kafsack, April E. Williams, Manuel Llinás, Matthew Berriman, Oliver Billker, Andrew P. Waters - Nature 2014 被引用: 485

  7. Genome organization and DNA accessibility control antigenic variation in trypanosomes

    著者: Laura S. M. Müller, Raúl O. Cosentino, Konrad U. Förstner, Julien Guizetti, Carolin Wedel, N. Kaplan, Christian J. Janzen, Panagiota Arampatzi, Jörg Vogel, Sascha Steinbiss, Thomas D. Otto, Antoine‐Emmanuel Saliba, Robert Sebra, T. Nicolai Siegel - Nature 2018 被引用: 227

  8. COVID-19 and RA share an SPP1 myeloid pathway that drives PD-L1+ neutrophils and CD14+ monocytes

    著者: Lucy MacDonald, Stefano Alivernini, Barbara Tolusso, Aziza Elmesmari, Domenico Somma, Simone Perniola, Annamaria Paglionico, Luca Petricca, Silvia Laura Bosello, Angelo Carfì, Michela Sali, Egidio Stigliano, Antonella Cingolani, Rita Murri, Vincenzo Arena, Massimo Fantoni, Massimo Antonelli, Francesco Landi, Francesco Franceschi, Maurizio Sanguinetti, Iain B. McInnes, Charles McSharry, Antonio Gasbarrini, Thomas D. Otto, Mariola Kurowska‐Stolarska, Elisa Gremese - JCI Insight 2021 被引用: 76

  9. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

    著者: Matthew B. Rogers, James D. Hilley, Nicholas J. Dickens, Jonathan Wilkes, Paul A. Bates, Daniel P. Depledge, David Harris, Yerim Her, Pawel Herzyk, Hideo Imamura, Thomas D. Otto, Mandy Sanders, Kathy Seeger, Jean‐Claude Dujardin, Matthew Berriman, Deborah F. Smith, Christiane Hertz‐Fowler, Jeremy C. Mottram - Genome Research 2011 被引用: 460

  10. Double-negative-2 B cells are the major synovial plasma cell precursor in rheumatoid arthritis

    著者: Elinor Wing, Catherine Sutherland, Katherine Miles, David Gray, Carl S. Goodyear, Thomas D. Otto, S. J. Breusch, Graeme Cowan, Mohini Gray - Frontiers in Immunology 2023 被引用: 42

  11. Optimizing illumina next-generation sequencing library preparation for extremely at-biased genomes

    著者: Samuel O. Oyola, Thomas D. Otto, Yong Gu, G. Maslen, Magnus Manske, Susana Campino, Daniel J. Turner, Bronwyn MacInnis, Dominic Kwiatkowski, Harold Swerdlow, Michael A. Quail - BMC Genomics 2012 被引用: 668

  12. Two Nonrecombining Sympatric Forms of the Human Malaria Parasite Plasmodium ovale Occur Globally

    著者: Colin J. Sutherland, Naowarat Tanomsing, Debbie Nolder, Mary C. Oguike, Charlie Jennison, Sasithon Pukrittayakamee, Christiane Dolecek, Tran Tinh Hien, Virgı́lio E. do Rosário, Ana Paula Arez, João Pinto, P Michon, Ananías A. Escalante, François Nosten, Martina Burke, Rogan Lee, Marie Blaze, Thomas D. Otto, John W. Barnwell, Arnab Pain, John E. Williams, Nicholas J. White, Nicholas Day, Georges Snounou, Peter J. Lockhart, Peter L. Chiodini, Mallika Imwong, Spencer D. Polley - The Journal of Infectious Diseases 2010 被引用: 411

  13. Robust high-throughput prokaryote de novo assembly and improvement pipeline for Illumina data

    著者: Andrew J. Page, Nishadi De Silva, Martin Hunt, Michael A. Quail, Julian Parkhill, Simon R. Harris, Thomas D. Otto, Jacqueline A. Keane - Microbial Genomics 2016 被引用: 269

  14. Whole genome sequencing of Plasmodium falciparum from dried blood spots using selective whole genome amplification

    著者: Samuel O. Oyola, Cristina V. Ariani, William L. Hamilton, Mihir Kekre, Lucas Amenga–Etego, Anita Ghansah, Gavin G. Rutledge, Seth Redmond, Magnus Manske, Dushyanth Jyothi, Chris Jacob, Thomas D. Otto, Kirk A. Rockett, Chris Newbold, Matthew Berriman, Dominic Kwiatkowski - Malaria Journal 2016 被引用: 200

  15. Genomes of all known members of a Plasmodium subgenus reveal paths to virulent human malaria

    著者: Thomas D. Otto, Aude Gilabert, Thomas Crellen, Ulrike Böhme, Céline Arnathau, Mandy Sanders, Samuel O. Oyola, Alain Prince Okouga, Larson Boundenga, Eric Willaume, Barthélémy Ngoubangoye, Nancy Diamella Moukodoum, Christophe Paupy, Patrick Durand, Virginie Rougeron, Benjamin Ollomo, François Renaud, Chris Newbold, Matthew Berriman, Franck Prugnolle - Nature Microbiology 2018 被引用: 199

  16. A new Plasmodium vivax reference sequence with improved assembly of the subtelomeres reveals an abundance of pir genes

    著者: Sarah Auburn, Ulrike Böhme, Sascha Steinbiss, Hidayat Trimarsanto, Jessica B. Hostetler, Mandy Sanders, Qi Gao, François Nosten, Chris Newbold, Matthew Berriman, Ric N. Price, Thomas D. Otto - Wellcome Open Research 2016 被引用: 170

  17. Long read assemblies of geographically dispersed Plasmodium falciparum isolates reveal highly structured subtelomeres

    著者: Thomas D. Otto, Ulrike Böhme, Mandy Sanders, Adam J. Reid, Ellen Bruske, Craig W. Duffy, Peter C. Bull, Richard D. Pearson, Abdirahman I. Abdi, Sandra Dimonte, Lindsay B. Stewart, Susana Campino, Mihir Kekre, William L. Hamilton, Antoine Claessens, Sarah K. Volkman, Daouda Ndiaye, Alfred Amambua‐Ngwa, Mahamadou Diakité, Rick M. Fairhurst, David J. Conway, Matthias Franck, Chris Newbold, Matthew Berriman - Wellcome Open Research 2018 被引用: 169

  18. Companion: a web server for annotation and analysis of parasite genomes

    著者: Sascha Steinbiss, Fatima Silva-Franco, Brian P. Brunk, Bernardo Foth, Christiane Hertz-Fowler, Matthew Berriman, Thomas D. Otto - Nucleic Acids Research, Nucleic Acids Res. 2016 被引用: 141

  19. Refining the transcriptome of the human malaria parasite Plasmodium falciparum using amplification-free RNA-seq

    著者: Lia Chappell, Philipp Ross, Lindsey Orchard, Timothy J. Russell, Thomas D. Otto, Matthew Berriman, Julian C. Rayner, Manuel Llinás - BMC Genomics 2020 被引用: 106

  20. Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

    著者: Keith Bradnam, Joseph Fass, Anton Alexandrov, Paul Baranay, Michael Bechner, İnanç Birol, Sébastien Boisvert, Jarrod Chapman, Guillaume Chapuis, Rayan Chikhi, Hamidreza Chitsaz, Wen‐Chi Chou, Jacques Corbeil, Cristian Del Fabbro, Roderick Docking, Richard Durbin, Dent Earl, Scott Emrich, Pavel Fedotov, Nuno A. Fonseca, Ganeshkumar Ganapathy, Richard A. Gibbs, Sante Gnerre, Élénie Godzaridis, Steve Goldstein, Matthias Haimel, Giles Hall, David Haussler, Joseph Hiatt, Isaac Ho, Jason T. Howard, Martin Hunt, Shaun D. Jackman, David B. Jaffe, Erich D. Jarvis, Huaiyang Jiang, С. В. Казаков, Paul Kersey, Jacob O. Kitzman, James Knight, Sergey Koren, Tak‐Wah Lam, Dominique Lavenier, François Laviolette, Yingrui Li, Zhenyu Li, Binghang Liu, Yue Liu, Ruibang Luo, Iain MacCallum, Matthew D. MacManes, Nicolas Maillet, Sergey Melnikov, Delphine Naquin, Zemin Ning, Thomas D. Otto, Benedict Paten, Octávio S. Paulo, Adam M. Phillippy, Francisco Pina‐Martins, Michael Place, Dariusz Przybylski, Xiang Qin, Carson Qu, Filipe J. Ribeiro, Stephen Richards, Daniel S. Rokhsar, J. Graham Ruby, Simone Scalabrin, Michael C. Schatz, David C. Schwartz, Alexey Sergushichev, Ted Sharpe, Timothy I. Shaw, Jay Shendure, Yujian Shi, Jared T. Simpson, Henry Song, Fedor Tsarev, Francesco Vezzi, Riccardo Vicedomini, Bruno Vieira, Jun Wang, Kim C. Worley, Shuangye Yin, Siu Ming Yiu, Jianying Yuan, Guojie Zhang, Hao Zhang, Shiguo Zhou, Ian Korf - GigaScience 2013 被引用: 735

  21. Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites

    著者: Yong Woo, Hifzur Rahman Ansari, Thomas D. Otto, Christen M. Klinger, Martin Kolísko, Jan Michálek, Alka Saxena, Dhanasekaran Shanmugam, Annageldi Tayyrov, Alaguraj Veluchamy, Shahjahan Ali, Axel Bernal, Javier del Campo, Jaromír Cihlář, Pavel Flegontov, Sebastian G. Gornik, Eva Hajdušková, Aleš Horák, Jan Janouškovec, Nicholas J Katris, Fred D. Mast, Diego Miranda‐Saavedra, Tobias Mourier, Raeece Naeem, Mridul Nair, Aswini K. Panigrahi, Neil D. Rawlings, Eriko Padron-Regalado, Abhinay Ramaprasad, Nadira Samad, Aleš Tomčala, Jonathan Wilkes, Daniel E. Neafsey, Christian Doerig, Chris Bowler, Patrick J. Keeling, David S. Roos, Joel B. Dacks, Thomas J. Templeton, Ross F. Waller, Julius Lukeš, Miroslav Obornı́k, Arnab Pain - eLife 2015 被引用: 328

  22. Increased circulation time of Plasmodium falciparum underlies persistent asymptomatic infection in the dry season

    著者: Carolina M. Andrade, Hannah Fleckenstein, Richard Thomson-Luque, Safiatou Doumbo, Nathália F. Lima, Carrie L. Anderson, J.Coote Hibbert, Christine S. Hopp, Tuan M. Tran, Shanping Li, Moussa Niangaly, Hamidou Cisse, Didier Doumtabé, Jeff Skinner, Dan E. Sturdevant, Stacy Ricklefs, Kimmo Virtaneva, Muhammad Asghar, Manijeh Vafa Homann, Louise Turner, Joana Martins, Erik L. Allman, Marie-Esther N’Dri, Volker Winkler, Manuel Llinás, Catherine Lavazec, Craig Martens, Anna Färnert, Kassoum Kayentao, Aïssata Ongoïba, Thomas Lavstsen, Nuno S. Osório, Thomas D. Otto, Mario Recker, Boubacar Traoré, Peter D. Crompton, Sílvia Portugal - Nature Medicine 2020 被引用: 145

  23. Cyclin-dependent kinase 12 is a drug target for visceral leishmaniasis

    著者: Susan Wyllie, Michael G. Thomas, Stephen Patterson, Sabrinia Crouch, Manu De Rycker, Rhiannon Lowe, Stephanie Gresham, Michael D. Urbaniak, Thomas D. Otto, Laste Stojanovski, Frederick R. C. Simeons, Sujatha Manthri, Lorna MacLean, Fabio Zuccotto, Nadine Homeyer, Hannah Pflaumer, Markus Böesche, Lalitha Sastry, Paul Connolly, Sébastien Albrecht, Matthew Berriman, Gerard Drewes, David W. Gray, Sonja Ghidelli‐Disse, Susan Dixon, José M. Fiandor, Paul G. Wyatt, Michael A. J. Ferguson, Alan H. Fairlamb, Timothy J. Miles, Kevin D. Read, Ian H. Gilbert - Nature 2018 被引用: 145

  24. Machine learning approaches classify clinical malaria outcomes based on haematological parameters

    著者: Collins M. Morang’a, Lucas Amenga–Etego, Saikou Y. Bah, Vincent Appiah, Dominic S. Y. Amuzu, Nicholas Amoako, James Abugri, Abraham Oduro, Aubrey J. Cunnington, Gordon A. Awandare, Thomas D. Otto - BMC Medicine 2020 被引用: 44