Tyler Alioto
2005–2025 年に発表
- 34
- 論文数
- 19,860
- 被引用数
- 28
- h 指数
- 33
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology75.6%
- Agricultural and Biological Sciences12%
- Medicine5.3%
- Immunology and Microbiology1.6%
- Neuroscience1.5%
- Environmental Science1.5%
- その他2.5%
トピック
- Cancer-related molecular mechanisms research10.8%
- RNA modifications and cancer8%
- RNA Research and Splicing6.8%
- Genomics and Phylogenetic Studies4.7%
- RNA and protein synthesis mechanisms3.7%
- Genomics and Chromatin Dynamics3.6%
- その他62.4%
共著者
- Jèssica Gómez‐Garrido17
- Fernando Cruz12
- Marta Gut12
- Roderic Guigó7
- Toni Gabaldón7
- André Corvelo5
- Anna Vlasova5
- Leonor Frías5
- Alexandre Reymond4
- Alice Mouton4
- Giulio Formenti4
- Hannes Svardal4
- Marina Marcet‐Houben4
- António Figueras3
- Aureliano Bombarely3
- Beatriz Novoa3
- Ernesto Lowy3
- Francisco Câmara3
- Jacqueline Chrast3
- Jennifer Harrow3
- José L. Garcı́a3
- Luca Cozzuto3
- Rosa Fernández3
- Salvador Capella-Gutiérrez3
全論文
- Landscape of transcription in human cells
著者: Sarah Djebali, Carrie Davis, Angelika Merkel, Alexander Dobin, Timo Lassmann, A Mortazavi, Andrea Tanzer, Julien Lagarde, Wei Lin, Felix Schlesinger, Chenghai Xue, Georgi K. Marinov, Jainab Khatun, Brian A. Williams, Chris Zaleski, Joel Rozowsky, Maik Röder, Felix Kokocinski, Rehab Abdelhamid, Tyler Alioto, Igor Antoshechkin, Michael T. Baer, Nadav Bar, Philippe Batut, Kimberly Bell, Ian Bell, Sudipto K. Chakrabortty, Xian Chen, Jacqueline Chrast, João Curado, Thomas Derrien, Jörg Drenkow, Erica Dumais, Jacqueline Dumais, Radha Duttagupta, Emilie Falconnet, Meagan Fastuca, Kata Fejes-Toth, Pedro G. Ferreira, Sylvain Foissac, Melissa J. Fullwood, Hui Gao, David González, Assaf Gordon, Harsha P. Gunawardena, Cédric Howald, Sonali Jha, Rory Johnson, Philipp Kapranov, Brandon King, Colin Kingswood, Oscar Junhong Luo, Eddie Park, Kimberly Persaud, Jonathan Preall, Paolo Ribeca, Brian A. Risk, Daniel Robyr, Michael Sammeth, Lorian Schaffer, Lei-Hoon See, Atif Shahab, Jørgen Skancke, Ana Maria Suzuki, Hazuki Takahashi, Hagen Tilgner, Diane Trout, Nathalie Walters, Huaien Wang, John A. Wrobel, Yanbao Yu, Xiaoan Ruan, Yoshihide Hayashizaki, Jennifer Harrow, Mark Gerstein, Tim Hubbard, Alexandre Reymond, Stylianos E. Antonarakis, Gregory J. Hannon, Morgan C. Giddings, Yijun Ruan, B Wold, Piero Carninci, Roderic Guigó, T Gingeras - Nature 2012 被引用: 5,413
- The tomato genome sequence provides insights into fleshy fruit evolution
著者: Kenta Shirasawa, Sachiko Isobe, Takakazu Kaneko, Hideki Hirakawa, Koh Aoki, Yasukazu Nakamura, Daisuke Shibata, Erika Asamizu, James Knight, James Knight, Robert Bogden, Changbao Li, Qi Feng, Danlin Fan, Changbao Li, Jun Wang, Xin Liu, Shifeng Cheng, Shuang Yang, Xun Xu, Yuanyuan Ren, Shengkai Pan, Alessandro Albiero, Francesca Dal Pero, Sara Todesco, J. Gosselin, Aureliano Bombarely, Jonathan A. Leto, Linyong Mao, Susan R. Strickler, Isaak Tecle, Aureliano Bombarely, Shan Gao, Minyun Huang, Robert Buels, Naama Menda, Yi Zheng, Julia Vrebalov, Silin Zhong, A. York, Joyce Van Eck, Theodore W. Thannhauser, Ruth A. White, Willem J. Stiekema, Paolo Ribeca, Tyler Alioto, Wencai Yang, Zhonghua Zhang, Xiaoxuan Wang, Jun He, Yanmei Guo, Ying Li, Jianchang Gao, Jianfeng Ren, Hongling Jiang, Hongshuang Li, Liuhua Yan, Jiuhai Zhao, Fuyou Fu, Zhenjun Li, Bao Wang, Bingtang Chen, Ke Jiang, Shiran Pasternak, Melissa Kramer, Shiran Pasternak, Laura Gelley, L.A. Shearer, Lorinda K. Anderson, Suzanne M. Royer, Jocelyn K. C. Rose, Jocelyn K. C. Rose, Nancy T. Eannetta, Ryan P. McQuinn, Antonio J. Matas, Yimin Xu, Roderic Guigó, Roderic Guigó, Stéphane Rombauts, Jeffrey A. Fawcett, Dani Zamir, Chunbo Liang, Rémy Bruggmann, M. Spannagl, Heidrun Gundlach, Zhiqi Jia, Zhibiao Ye, Rosa Lopez-Cobollo, Ioannis Filippis, Daniel Buchan, James Abbott, Rosa López-Cobollo, Manju Singh, Jitendra Kumar Pal, Vivek Dogra, Awadhesh Pandit, Tilak Raj Sharma, Trilochan Mohapatra, Kishor Gaikwad, Manju Singh ほか 171 名 - Nature 2012 被引用: 3,408
- Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
著者: Fabio Pardi, Damian Keefe, Benedict Paten, Tim Massingham, Simon Whelan, Abel Ureta‐Vidal, Ari Löytynoja, Paul Flicek, Ewan Birney, Simon Whelan, Ewan Birney, Nick Goldman, Robert E. Thurman, Fidencio Neri, Shane Neph, Kirsten Lee, Jeff Goldy, Anthony Shafer, Michael O. Dorschner, Molly Weaver, Richard Sandstrom, J Stamatoyannopoulos, Andrew Haydock, Richard Sandstrom, William Stafford Noble, J Stamatoyannopoulos, Nathan Day, Richard Humbert, J Stamatoyannopoulos, Peter J. Sabo, Anindya Dutta, Ankit Malhotra, Neerja Karnani, Christopher M. Taylor, Roderic Guigó, Anindya Dutta, Patrick J. Boyle, Man Yu, Tyler Alioto, Josep F. Abril, Roderic Guigó, Eduardo Eyras, Núria López-Bigas, Philipp Kapranov, Josep F. Abril, Robert Castelo, Julien Lagarde, Jorg Drenkow, Eduardo Eyras, Srinka Ghosh, Evelyn J. Cheung, David A. Nix, Philipp Kapranov, Madhavan Ganesh, Ian Bell, Jill Cheng, Sylvain Foissac, Eric D. Green, Hari Tammana, Jörg Drenkow, T Gingeras, Valerie V.B. Maduro, Sujit Dike, T Gingeras, Yutao Fu, Ulaş Karaöz, Francis S. Collins, Valerie V. Maduro, Elliott H. Margulies, Eric D. Green, Hennady P. Shulha, Elliott H. Margulies, Jacquelyn R. Idol, Michael Snyder, Anason Halees, Xiaoling Zhang, Mousheng Xu, Ulaş Karaöz, Alexander E. Urban, Yutao Fu, Joel Rozowsky, Hennady P. Shulha, Yong Yu, Jaafar N. Haidar, Mark Gerstein, Jane M. Lin, Ghia Euskirchen, Jiaqian Wu, Ugrappa Nagalakshmi, M Snyder, Stephen E. Hartman, Peter R. Kraus, Pawandeep Dhami, Alexander E. Urban, Deyou Zheng, Joel Rozowsky, David Vetrie, Zhengdong D. Zhang, Ian Dunham, Michael Seringhaus ほか 212 名 - Nature 2007 被引用: 5,283
- How genomics can help biodiversity conservation
著者: Kathrin Theißinger, Carlos Fernandes, Giulio Formenti, Iliana Bista, Paul R. Berg, Christoph Bleidorn, Aureliano Bombarely, Angelica Crottini, Guido Roberto Gallo, José A. Godoy, Sissel Jentoft, Joanna Malukiewicz, Alice Mouton, Rebekah A. Oomen, Sadye Paez, Per J. Palsbøll, Christophe Pampoulie, María José Ruiz‐López, Simona Secomandi, Hannes Svardal, Constantina Theofanopoulou, Jan de Vries, Ann‐Marie Waldvogel, Guojie Zhang, Erich D. Jarvis, Miklós Bálint, Claúdio Ciofi, Robert M. Waterhouse, Camila J. Mazzoni, Jacob Höglund, Sargis A. Aghayan, Tyler Alioto, Isabel Almudí, Nadir Álvarez, Paulo C. Alves, Isabel R. Amorim, Agostinho Antunes, Paula Arribas, Petr Baldrián, Giorgio Bertorelle, Astrid Böhne, Andrea Bonisoli‐Alquati, Ljudevit Luka Boštjančić, Bastien Boussau, Catherine Breton, Elena Bužan, Paula F. Campos, Carlos Carreras, L. Filipe C. Castro, Luis J. Chueca, Fedor Čiampor, Elena Conti, Robert Cook‐Deegan, Daniel Croll, Mónica V. Cunha, Frédéric Delsuc, Alice B. Dennis, Dimitar Dimitrov, Rui Faria, Adrien Favre, Olivier Fédrigo, Rosa Fernández, Gentile Francesco Ficetola, Jean‐François Flot, Toni Gabaldón, D. Agius, Alice Maria Giani, M. Thomas P. Gilbert, Tine Grebenc, Katerina Guschanski, Romain Guyot, Bernhard Hausdorf, Oliver Hawlitschek, Peter D. Heintzman, Berthold Heinze, Michael Hiller, Martin Husemann, Alessio Iannucci, Iker Irisarri, Kjetill S. Jakobsen, Peter Klinga, Agnieszka Kloch, Claudius F. Kratochwil, Henrik Kusche, Kara K S Layton, Jennifer A. Leonard, Emmanuelle Lerat, Gianni Liti, Tereza Manousaki, Tomàs Marquès‐Bonet, Pável Matos‐Maraví, Michael Matschiner, Florian Maumus, Ann M. Mc Cartney, Shai Meiri, José Melo‐Ferreira, Ximo Mengual, Michael T. Monaghan, Matteo Montagna, Robert W. Mysłajek ほか 33 名 - Trends in Genetics 2023 被引用: 400
- The era of reference genomes in conservation genomics
著者: Giulio Formenti, Kathrin Theißinger, Carlos Fernandes, Iliana Bista, Aureliano Bombarely, Christoph Bleidorn, Claúdio Ciofi, Angelica Crottini, José A. Godoy, Jacob Höglund, Joanna Malukiewicz, Alice Mouton, Rebekah A. Oomen, Sadye Paez, Per J. Palsbøll, Christophe Pampoulie, María José Ruiz‐López, Hannes Svardal, Constantina Theofanopoulou, Jan de Vries, Ann‐Marie Waldvogel, Guojie Zhang, Camila J. Mazzoni, Erich D. Jarvis, Miklós Bálint, Giulio Formenti, Kathrin Theißinger, Carlos Fernandes, Iliana Bista, Aureliano Bombarely, Christoph Bleidorn, Fedor Čiampor, Claúdio Ciofi, Angelica Crottini, José A. Godoy, Jacob Höglund, Joanna Malukiewicz, Alice Mouton, Rebekah A. Oomen, Sadye Paez, Per J. Palsbøll, Christophe Pampoulie, María José Ruiz‐López, Hannes Svardal, Constantina Theofanopoulou, Jan de Vries, Ann‐Marie Waldvogel, Goujie Zhang, Camila J. Mazzoni, Erich D. Jarvis, Miklós Bálint, Sargis A. Aghayan, Tyler Alioto, Isabel Almudí, Nadir Álvarez, Paulo C. Alves, Isabel R. Amorim, Agostinho Antunes, Paula Arribas, Petr Baldrián, Paul R. Berg, Giorgio Bertorelle, Astrid Böhne, Andrea Bonisoli‐Alquati, Ljudevit Luka Boštjančić, Bastien Boussau, Catherine Breton, Elena Bužan, Paula F. Campos, Carlos Carreras, L. Filipe C. Castro, Luis J. Chueca, Elena Conti, Robert Cook‐Deegan, Daniel Croll, Mónica V. Cunha, Frédéric Delsuc, Alice B. Dennis, Dimitar Dimitrov, Rui Faria, Adrien Favre, Olivier Fédrigo, Rosa Fernández, Gentile Francesco Ficetola, Jean‐François Flot, Toni Gabaldón, D. Agius, Guido Roberto Gallo, Alice Maria Giani, M. Thomas P. Gilbert, Tine Grebenc, Katerina Guschanski, Romain Guyot, Bernhard Hausdorf, Oliver Hawlitschek, Peter D. Heintzman, Berthold Heinze, Michael Hiller, Martin Husemann, Alessio Iannucci ほか 58 名 - Trends in Ecology & Evolution 2022 被引用: 385
- The genome of melon ( Cucumis melo L.)
著者: Jordi García-Más, Andrej Benjak, Walter Sanseverino, Michaël Bourgeois, Gisela Mir Arnau, Víctor M González, Elizabeth Hénaff, Francisco Câmara Ferreira, Luca Cozzuto, Ernesto Lowy, Tyler Alioto, Salvador Capella-Gutiérrez, José Blanca, Joaquı́n Cañizares, Pello Ziarsolo, Daniel González‐Ibeas, Luis Rodríguez‐Moreno, Marcus Droege, Lei Du, Miguel Álvarez-Tejado, Belén Lorente-Galdós, Marta Melé, Luming Yang, Yiqun Weng, Arcadi Navarro, Tomàs Marquès‐Bonet, Miguel A. Aranda, Fernando Nuez, Belén Picó, Toni Gabaldón, Guglielmo Roma, Roderic Guigó, Josep Casacuberta, Pere Arús, Pere Puigdomènech - National Academy of Sciences, Proceedings of the National Academy of Sciences 2012 被引用: 759
- The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution
著者: Christine G. Elsik, Ross L. Tellam, Kim C. Worley, Richard A. Gibbs, Donna M. Muzny, George M. Weinstock, David L. Adelson, Evan E. Eichler, Laura Elnitski, Roderic Guigó, Debora L. Hamernik, S M Kappes, Harris A. Lewin, David J. Lynn, F. W. Nicholas, Alexandre Reymond, Monique Rijnkels, Loren C. Skow, Evgeny M. Zdobnov, Lawrence B. Schook, James E. Womack, Tyler Alioto, Stylianos E. Antonarakis, Alex Astashyn, Charles E. Chapple, Hsiu-Chuan Chen, Jacqueline Chrast, Francisco Câmara, Olga Ermolaeva, Charlotte N. Henrichsen, Wratko Hlavina, Yuri Kapustin, Boris Kiryutin, Paul Kitts, Felix Kokocinski, Melissa Landrum, Donna Maglott, Kim D. Pruitt, Victor Sapojnikov, Stephen M. J. Searle, Victor Solovyev, Alexandre Souvorov, Catherine Ucla, Carine Wyss, Juan Manuel Anzola, Daniel Gerlach, Eran Elhaik, Dan Graur, Justin Reese, R. C. Edgar, John C. McEwan, Gemma M. Payne, Joy M Raison, Thomas Junier, Evgenia V. Kriventseva, Eduardo Eyras, Mireya Plass, Ravikiran Donthu, Denis M. Larkin, James M. Reecy, Mary Qu Yang, Lin Chen, Ze Cheng, Carol G. Chitko-McKown, George E. Liu, Lakshmi K. Matukumalli, Jiuzhou Song, Bin Zhu, Daniel G. Bradley, Fiona S. L. Brinkman, Lilian Pek Lian Lau, Matthew D. Whiteside, Angela M. Walker, Thomas T. Wheeler, Theresa Casey, J. Bruce German, Danielle G. Lemay, Nauman J. Maqbool, Adrian Molenaar, Seongwon Seo, Paul Stothard, Cynthia L. Baldwin, R. Baxter, Candice Brinkmeyer‐Langford, Wendy C. Brown, Christopher Childers, Timothy Connelley, Shirley A. Ellis, K. L. Fritz, Elizabeth Glass, Carolyn T.A. Herzig, Antti Iivanainen, Kevin K. Lahmers, Anna K. Bennett, C. Michael Dickens, James Gilbert, Darren E. Hagen, Hanni Salih, Jan Aerts, Alexandre Rodrigues Caetano ほか 207 名 - Science 2009 被引用: 1,349
- Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel
著者: Marco Gerdol, Rebeca Moreira, Fernando Cruz, Jèssica Gómez‐Garrido, Anna Vlasova, Umberto Rosani, Paola Venier, Miguel A. Naranjo-Ortíz, Maria Murgarella, Samuele Greco, Pablo Balseiro, André Corvelo, Leonor Frías, Marta Gut, Toni Gabaldón, Alberto Pallavicini, Carlos Canchaya, Beatriz Novoa, Tyler Alioto, David Posada, António Figueras - Genome biology 2020 被引用: 179
- Using geneid to Identify Genes
著者: Tyler Alioto, Enrique Blanco, Genı́s Parra, Roderic Guigó - Current Protocols in Bioinformatics 2018 被引用: 194
- Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
著者: Federico Abascal, André Corvelo, Fernando Cruz, José Luis Villanueva‐Cañas, Anna Vlasova, Marina Marcet‐Houben, Begoña Martínez‐Cruz, Jade Yu Cheng, Pablo Prieto, Vı́ctor Quesada, Javier Quilez, Gang Li, F. García, Miriam Rubio-Camarillo, Leonor Frías, Paolo Ribeca, Salvador Capella-Gutiérrez, J. M. Rodríguez, Francisco Câmara Ferreira, Ernesto Lowy, Luca Cozzuto, Ionas Erb, Michael L. Tress, Jose L. Rodriguez-Ales, Jorge Ruiz‐Orera, Ferrán Reverter, Mireia Casas‐Marce, Laura García-España Soriano, Javier R. Arango, Sophia Derdak, Beatriz Galán, Julie Blanc, Marta Gut, Belén Lorente-Galdós, Marta Andrés-Nieto, Carlos López-Otı́n, Alfonso Valencia, Marta Gut, José L. Garcı́a, Roderic Guigó, William J. Murphy, Aurora Ruiz‐Herrera, Tomàs Marquès‐Bonet, Guglielmo Roma, Cédric Notredame, Thomas Mailund, M. Mar Albà, Toni Gabaldón, Tyler Alioto, José A. Godoy - Genome biology 2016 被引用: 228
- Genome sequence of the olive tree, Olea europaea
著者: Fernando Cruz, Irene Julca, Jèssica Gómez‐Garrido, Damian Loska, Marina Marcet‐Houben, Emilio Cano, Beatriz Galán, Leonor Frías, Paolo Ribeca, Sophia Derdak, Marta Gut, Manuel Sánchez-Fernández, José L. Garcı́a, Marta Gut, Pablo Vargas, Tyler Alioto, Toni Gabaldón - GigaScience 2016 被引用: 219
- Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)
著者: Irene Julca, Marina Marcet‐Houben, Fernando Cruz, Jèssica Gómez‐Garrido, Brandon S. Gaut, Concepción M. Díez, Marta Gut, Tyler Alioto, Pablo Vargas, Toni Gabaldón - BMC Biology 2020 被引用: 97
- The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics
著者: Ann M. Mc Cartney, Giulio Formenti, Alice Mouton, Diego De Panis, Luísa S. Marins, Henrique G. Leitão, Genevieve Diedericks, Joseph Kirangwa, Marco Morselli, Judit Salces-Ortiz, Nuria Escudero, Alessio Iannucci, Chiara Natali, Hannes Svardal, Rosa Fernández, Tim De Pooter, Geert Joris, Mojca Stražišar, Jonathan Wood, Katie E Herron, Ole Seehausen, Phillip C. Watts, Felix Shaw, Robert Davey, Alice Minotto, José M. Fernández, Astrid Böhne, Carla Alegria, Tyler Alioto, Paulo C. Alves, Isabel R. Amorim, Jean‐Marc Aury, Niclas Backström, Petr Baldrián, Laima Baltrūnaitė, Endre Barta, Bertrand Bed’Hom, Caroline Belser, Johannes Bergsten, Laurie Bertrand, Helena Bilandija, Mahesh Panchal, Iliana Bista, Mark Blaxter, Paulo A. V. Borges, Guilherme Borges Dias, Mirte Bosse, Tom Brown, Rémy Bruggmann, Elena Buena‐Atienza, Josephine Burgin, Elena Bužan, Alessia Cariani, Nicolas Casadei, Matteo Chiara, Sérgio Chozas, Fedor Čiampor, Angelica Crottini, Corinne Cruaud, Fernando Cruz, Love Dalén, Alessio De Biase, Javier del Campo, Teo Delić, Alice B. Dennis, Martijn F. L. Derks, Maria Angela Diroma, Mihajla Djan, Simone Duprat, Klara Eleftheriadi, Philine G. D. Feulner, Jean‐François Flot, Giobbe Forni, Bruno Fosso, Pascal Fournier, Christine Fournier‐Chambrillon, Toni Gabaldon, Shilpa Garg, Carmela Gissi, Luca Giupponi, Jèssica Gómez‐Garrido, Josefa González, Miguel L. Grilo, Björn Grüning, Thomas Guérin, Nadège Guiglielmoni, Marta Gut, Marcel P. Haesler, Christoph Hahn, Bálint Halpern, Peter W. Harrison, Julia Heintz, Maris Hindrikson, Jacob Höglund, Kerstin Howe, Graham M. Hughes, Benjamin Istace, J. Mark Cock, Franc Janžekovič, Zophonı́as O. Jónsson ほか 103 名 - npj Biodiversity 2024 被引用: 45
- Emergence of 16S rRNA methyltransferases among carbapenemase-producing Enterobacterales in Spain studied by whole-genome sequencing
著者: Jorge Arca-Suárez, Bruno K. Rodiño‐Janeiro, Astrid Pérez, Paula Guijarro-Sánchez, Juan Carlos Vázquez-Ucha, Fernando Cruz, Jèssica Gómez‐Garrido, Tyler Alioto, Miguel Álvarez-Tejado, Marta Gut, Marta Gut, Marina Oviaño, Alejandro Beceiro, Germán Bou, Irene Merino, Emilia Cercenado, Rosa Gómez, Tamara Soler, Irene Gracia-Ahufinger, L. Hibberd Martin, Fátima Galán‐Sánchez, Nuria Tormo, Juan Carlos Rodrı́guez, Sílvia Capilla, Francesc Marco, María Dolores Quesada, Emma Padilla, Fé Tubau, Juanjo González, Ana Isabel López‐Calleja, José Luís del Pozo, María Inmaculada García, Mariela Martínez, Jorge Calvo, Xavier Mulet, F. J. García Peña, Ana Isabel Rodríguez, María José Gude, Ana Fernández, Javier Fernández - International Journal of Antimicrobial Agents 2021 被引用: 32
- A chromosome‐level genome assembly enables the identification of the follicule stimulating hormone receptor as the master sex‐determining gene in the flatfish Solea senegalensis
著者: Roberto de la Herrán, Miguel Hermida, Juan A. Rubiolo, Jèssica Gómez‐Garrido, Fernando Cruz, Francisca Robles, Rafael Navajas‐Pérez, Andrés Blanco, Paula R. Villamayor, Dorinda Torres, Pablo Sánchez‐Quinteiro, Daniel Candala Ramírez, María E. Rodríguez, Alberto Arias‐Pérez, Ismael Cross, Neil Duncan, Teresa Martínez‐Peña, A. Riaza, Adrián Millán, Maria Cristina De Rosa, Davide Pirolli, Marta Gut, Carmen Bouza, Diego Robledo, Laureana Rebordinos, Tyler Alioto, Carmelo Ruíz‐Rejón, Paulino Martı́nez - Molecular Ecology Resources 2023 被引用: 38
- A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing
著者: Tyler Alioto, Ivo Buchhalter, Sophia Derdak, Barbara Hutter, Matthew Eldridge, Eivind Hovig, Lawrence E. Heisler, Timothy A. Beck, Jared T. Simpson, Laurie Tonon, Anne-Sophie Sertier, Ann‐Marie Patch, Natalie Jäger, Philip Ginsbach, Ruben M. Drews, Nagarajan Paramasivam, Rolf Kabbe, Sasithorn Chotewutmontri, Nicolle Diessl, Christopher Previti, Sabine Schmidt, Benedikt Brors, Lars Feuerbach, Michael C. Heinold, Susanne Gröbner, Andrey Korshunov, Patrick Tarpey, Adam P. Butler, Jonathan Hinton, David Jones, Andrew Menzies, Keiran Raine, Rebecca Shepherd, Lucy Stebbings, Jon W. Teague, Paolo Ribeca, Francesc Castro-Giner, Sergi Beltrán, Emanuele Raineri, Marc Dabad, Simon Heath, Marta Gut, Robert E. Denroche, Nicholas J. Harding, Takafumi N. Yamaguchi, Akihiro Fujimoto, Hidewaki Nakagawa, Vı́ctor Quesada, Rafael Valdés‐Mas, Sigve Nakken, Daniel Vodák, Lawrence Bower, Andy G. Lynch, Charlotte Anderson, Nicola Waddell, John V. Pearson, Sean M. Grimmond, Myron Peto, Paul T. Spellman, Minghui He, Cyriac Kandoth, Semin Lee, John H. Zhang, Louis Létourneau, Singer Ma, Sahil Seth, David Torrents, Xi Liu, David A. Wheeler, Carlos López-Otı́n, Elı́as Campo, Peter J. Campbell, Paul C. Boutros, Xosé S. Puente, Daniela S. Gerhard, Stefan M. Pfister, John D. McPherson, Thomas J. Hudson, Matthias Schlesner, Peter Lichter, Roland Eils, David Jones, Marta Gut - Nature Communications 2015 被引用: 337
- Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): a fish adapted to demersal life
著者: António Figueras, Diego Robledo, André Corvelo, Miguel Hermida, Patricia Pereiro, Juan A. Rubiolo, Jèssica Gómez‐Garrido, Laia Carreté, Xabier Bello, Marta Gut, Marta Gut, Marina Marcet‐Houben, Gabriel Forn‐Cuní, Beatriz Galán, José L. Garcı́a, José Luis Abal-Fabeiro, Belén G. Pardo, Xoana Taboada, Carlos Fernández, Anna Vlasova, Antonio Hermoso, Roderic Guigó, José Antonio Álvarez‐Dios, Antonio Gómez‐Tato, Ana Viñas, Xulio Maside, Toni Gabaldón, Beatriz Novoa, Carmen Bouza, Tyler Alioto, Paulino Martı́nez - DNA Research 2016 被引用: 172
- A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797)
著者: Dalila Destanović, Darrin T. Schultz, Ruth Styfhals, Fernando Cruz, Jèssica Gómez‐Garrido, Marta Gut, Marta Gut, Graziano Fiorito, Oleg Simakov, Tyler Alioto, Giovanna Ponte, Eve Seuntjens - G3 Genes Genomes Genetics 2023 被引用: 32
- The Catalan initiative for the Earth BioGenome Project: contributing local data to global biodiversity genomics
著者: Montserrat Corominas, Tomàs Marquès‐Bonet, Miquel A. Arnedo, Mónica Bayés, Jordina Belmonte, Héctor Escrivá, Rosa Fernández, Toni Gabaldón, Teresa Garnatje, Josep Germain, Manel Niell, Ferran Palero, Joan Pons, Pere Puigdomènech, The Catalan initiative for the Earth BioGenome Project, Laura Aguilera, Francisco Cámara, Jèssica Gómez‐Garrido, Fernando Cruz, Ignacio Sánchez-Escudero, Cristian R. Altaba, Rui Alves, Enrique Arboleda, María Capa, Laura Triginer, Vicent Arbona, Conxita Àvila, Laura Baldo, Alba Enguídanos, Andrea Prófumo, Owen S Wangesteen, Margarida Barceló-Serra, Laura R. Botigué, Amparo Monfort, Bernat Burriel‐Carranza, Salvador Carranza, Javier del Campo, Gabriel Mochales‐Riaño, Marc Palmada‐Flores, Héctor Candela, Cristian Cañestro, Carlos Carreras, M. Casanella Doménech, Carles Galià‐Camps, Sara Guirao‐Rico, Jesús Lozano-Fernández, Marta Pascual, Cinta Pegueroles, Alejandro Sánchez‐Gracia, Miguel Á. Carretero, Oriol Grau, Romina Garrido, Xavier Grau‐Bové, Antonio Hermoso, Iana V. Kim, José A. Jurado‐Rivera, Carles Lalueza‐Fox, Jean‐Baptiste Ledoux, Ramiro Logares, Ramón Massana, Francesc Piferrer, Juli Mauri, Francesc Mesquita‐Joanes, Juan S. Monrós, Jaume Pellicer, Josep Peñuelas, Cristina Roquet, Aurora Ruiz‐Herrera, Guifré Torruella, Xavier Turón, Marc Ventura, Vanesa Jiménez Arroyo, Cristian Cuevas-Caballé, Joan Ferrer, Ivo Gut, Marta Gut, Oriane Hidalgo, Guillem Izquierdo-Arànega, Laia Pérez-Sorribes, Emilio Righi, Marta Riutort, Joan Vallès, Julio Rozas, Tyler Alioto, Roderic Guigó - NAR Genomics and Bioinformatics 2024 被引用: 16
- Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings
著者: Isabel Almudí, Joel Vizueta, Christopher D. R. Wyatt, Alex de Mendoza, Ferdinand Marlétaz, Panos Firbas, Roberto Feuda, Giulio Masiero, Patricia Medina-Burgos, Ana Alcaina‐Caro, Fernando Cruz, Jèssica Gómez‐Garrido, Marta Gut, Tyler Alioto, Carlos Vargas-Chávez, Kristofer Davie, Bernhard Misof, Josefa González, Stein Aerts, Ryan Lister, Jordi Paps, Julio Rozas, Alejandro Sánchez‐Gracia, Manuel Irimia, Ignacio Maeso, Fernando Casares - Nature Communications 2020 被引用: 89
- The Origins, Evolution, and Functional Potential of Alternative Splicing in Vertebrates
著者: Jonathan M. Mudge, Adam Frankish, Julio Fernandez-Banet, Tyler Alioto, Thomas Derrien, C. Howald, Alexandre Reymond, Roderic Guigó, Tim Hubbard, Jennifer Harrow - Molecular Biology and Evolution 2011 被引用: 87
- Developmental RNA-Seq transcriptomics of haploid germ cells and spermatozoa uncovers novel pathways associated with teleost spermiogenesis
著者: Júlia Castro-Arnau, François Chauvigné, Jèssica Gómez‐Garrido, Anna Esteve‐Codina, Marc Dabad, Tyler Alioto, Roderick Nigel Finn, Joan Cerdà - Scientific Reports 2022 被引用: 25
- Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes
著者: Anna Vlasova, Salvador Capella-Gutiérrez, Martha Rendón‐Anaya, Miguel Ángel Hernández‐Oñate, André E. Minoche, Ionas Erb, Francisco Câmara, Pablo Prieto, André Corvelo, Walter Sanseverino, Gastón Westergaard, Juliane C. Dohm, Γεώργιος Παππάς, Soledad Saburido-Álvarez, Darek Kedra, Irene Gonzalez, Luca Cozzuto, Jèssica Gómez‐Garrido, María Aguilar-Morón, Núria Andreu, O. Mario Aguilar, Jordi García-Más, Maik Zehnsdorf, Martı́n Vázquez, Alfonso Delgado‐Salinas, Luis Delaye, Ernesto Lowy, Alejandro Mentaberry, Rosana Pereira Vianello, José L. Garcı́a, Tyler Alioto, Federico Sánchez, Heinz Himmelbauer, Marta Santalla, Cédric Notredame, Toni Gabaldón, Alfredo Herrera‐Estrella, Roderic Guigó - Genome biology 2016 被引用: 242
- Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions
著者: France Denœud, Philipp Kapranov, Catherine Ucla, Adam Frankish, Robert Castelo, Jörg Drenkow, Julien Lagarde, Tyler Alioto, Caroline Manzano, Jacqueline Chrast, Sujit Dike, Carine Wyss, Charlotte N. Henrichsen, Nancy Holroyd, Mark Dickson, Ruth Taylor, Zahra Hance, Sylvain Foissac, R Myers, Jane Rogers, Tim Hubbard, Jennifer Harrow, Roderic Guigó, T Gingeras, Stylianos E. Antonarakis, Alexandre Reymond - Genome Research 2007 被引用: 207
