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Alexander Stark

Active 2000–2025

94
Papers
35,155
Citations
71
h-index
88
i10-index

Citations

Citations per year for Alexander Stark1982: 1 citations1990: 2 citations1992: 2 citations1993: 2 citations1996: 3 citations1997: 2 citations1998: 1 citations2000: 2 citations2001: 16 citations2002: 6 citations2003: 57 citations2004: 139 citations2005: 224 citations2006: 271 citations2007: 442 citations2008: 553 citations2009: 716 citations2010: 711 citations2011: 651 citations2012: 654 citations2013: 600 citations2014: 645 citations2015: 608 citations2016: 493 citations2017: 445 citations2018: 468 citations2019: 1,024 citations2020: 1,024 citations2021: 974 citations2022: 671 citations2023: 634 citations2024: 863 citations2025: 375 citations2026: 11 citations1983–1989: no citations, so these years are not shown1991: no citations, so this year is not shown1994–1995: no citations, so these years are not shown1999: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 5,314 citing papers, 34.2% of this breakdownChina: 1,472 citing papers, 9.5% of this breakdownUnited Kingdom: 1,066 citing papers, 6.9% of this breakdownGermany: 1,065 citing papers, 6.9% of this breakdownFrance: 620 citing papers, 4% of this breakdownCanada: 495 citing papers, 3.2% of this breakdownJapan: 445 citing papers, 2.9% of this breakdownAustralia: 394 citing papers, 2.5% of this breakdownNetherlands: 365 citing papers, 2.4% of this breakdownItaly: 359 citing papers, 2.3% of this breakdownSpain: 349 citing papers, 2.2% of this breakdownSwitzerland: 331 citing papers, 2.1% of this breakdown
0%34.2%Other 20.9%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology73.5%
  • Agricultural and Biological Sciences11.1%
  • Medicine6.8%
  • Neuroscience2.9%
  • Immunology and Microbiology2.4%
  • Computer Science1%
  • Other2.3%

Topics

  • Genomics and Chromatin Dynamics7.6%
  • RNA Research and Splicing7.1%
  • MicroRNA in disease regulation6.6%
  • RNA modifications and cancer4.4%
  • RNA and protein synthesis mechanisms4.2%
  • Chromosomal and Genetic Variations4.2%
  • Other65.9%

Coauthors

All papers

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  1. Genome-Wide Quantitative Enhancer Activity Maps Identified by STARR-seq

    Authors: Cosmas D. Arnold, Daniel Gerlach, Christoph Stelzer, Łukasz M. Boryń, Martina Rath, Alexander Stark - Science 2013 cited by 1,257

  2. Eukaryotic core promoters and the functional basis of transcription initiation

    Authors: Vanja Haberle, Alexander Stark - Nature Reviews Molecular Cell Biology 2018 cited by 791

  3. Discrete Small RNA-Generating Loci as Master Regulators of Transposon Activity in Drosophila

    Authors: Julius Brennecke, Alexei A. Aravin, Alexander Stark, Monica Dus, Manolis Kellis, Ravi Sachidanandam, Gregory J. Hannon - Cell 2007 cited by 2,626

  4. DeepSTARR predicts enhancer activity from DNA sequence and enables the de novo design of synthetic enhancers

    Authors: Bernardo P. de Almeida, Franziska Reiter, Michaela Pagani, Alexander Stark - Nature Genetics 2022 cited by 296

  5. Histone modifications at human enhancers reflect global cell-type-specific gene expression

    Authors: Nathaniel D. Heintzman, Gary C. Hon, R. David Hawkins, Pouya Kheradpour, Alexander Stark, Lindsey F. Harp, Zhen Ye, Leonard K. Lee, Rhona Stuart, Christina W. Ching, Keith A. Ching, Jessica Antosiewicz‐Bourget, Hui Liu, Xinmin Zhang, Roland D. Green, Victor V. Lobanenkov, Ron Stewart, James A. Thomson, Gregory E. Crawford, Manolis Kellis, Bing Ren - Nature 2009 cited by 2,620

  6. Transcriptional enhancers: from properties to genome-wide predictions

    Authors: Daria Shlyueva, Gerald Stampfel, Alexander Stark - Nature Reviews Genetics 2014 cited by 1,445

  7. Combinatorial function of transcription factors and cofactors

    Authors: Franziska Reiter, Sebastian Wienerroither, Alexander Stark - Current Opinion in Genetics & Development 2017 cited by 403

  8. Targeted design of synthetic enhancers for selected tissues in the Drosophila embryo

    Authors: Bernardo P. de Almeida, Christoph Schaub, Michaela Pagani, Stefano Secchia, Eileen E. M. Furlong, Alexander Stark - Nature 2023 cited by 90

  9. A high-resolution map of human evolutionary constraint using 29 mammals

    Authors: Kerstin Lindblad‐Toh, Manuel Garber, Or Zuk, Michael F. Lin, Brian J. Parker, Stefan Washietl, Pouya Kheradpour, Jason Ernst, Gregory E. Jordan, Evan Mauceli, Lucas D. Ward, Craig B. Lowe, Alisha K. Holloway, Michèle Clamp, Sante Gnerre, Jessica Alföldi, Kathryn Beal, Jean L. Chang, Hiram Clawson, James Cuff, Federica Di Palma, Stephen Fitzgerald, Paul Flicek, Mitchell Guttman, Melissa J. Hubisz, David B. Jaffe, Irwin Jungreis, W. James Kent, Dennis Kostka, Marcia Lara, André L. Martins, Tim Massingham, Ida Moltke, Brian J. Raney, Matthew D. Rasmussen, Jim Robinson, Alexander Stark, Albert J. Vilella, Jiayu Wen, Xiaohui Xie, Michael C. Zody, Kim C. Worley, Christie Kovar, Donna M. Muzny, Richard A. Gibbs, Wesley C. Warren, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Ewan Birney, Elliott H. Margulies, Javier Herrero, Eric D. Green, David Haussler, Adam Siepel, Nick Goldman, Katherine S. Pollard, Jakob Skou Pedersen, Eric S. Lander, Manolis Kellis - Nature 2011 cited by 1,228

  10. Principles of MicroRNA–Target Recognition

    Authors: Julius Brennecke, Alexander Stark, Robert B. Russell, Stephen M. Cohen - PLoS Biology 2005 cited by 2,368

  11. Specialized piRNA Pathways Act in Germline and Somatic Tissues of the Drosophila Ovary

    Authors: Colin D. Malone, Julius Brennecke, Monica Dus, Alexander Stark, W. Richard McCombie, Ravi Sachidanandam, Gregory J. Hannon - Cell 2009 cited by 909

  12. Transcriptional plasticity promotes primary and acquired resistance to BET inhibition

    Authors: Philipp Rathert, Mareike Roth, Tobias Neumann, Felix Muerdter, Jae‐Seok Roe, Matthias Muhar, Sumit Deswal, Sabine Cerny‐Reiterer, Barbara Peter, Julian Jude, Thomas Hoffmann, Łukasz M. Boryń, Elin Axelsson, Norbert Schweifer, Ulrike Tontsch-Grunt, Lukas E. Dow, Davide Gianni, Mark Pearson, Peter Valent, Alexander Stark, Norbert Kraut, Christopher R. Vakoc, Johannes Zuber - Nature 2015 cited by 522

  13. Enhancer–core-promoter specificity separates developmental and housekeeping gene regulation

    Authors: Muhammad A. Zabidi, Cosmas D. Arnold, Katharina Schernhuber, Michaela Pagani, Martina Rath, Olga Frank, Alexander Stark - Nature 2014 cited by 508

  14. Evolution of genes and genomes on the Drosophila phylogeny

    Authors: Charles F. Aquadro, K. Ravi Ram, Mariana F. Wolfner, Andrew G. Clark, Alex Wong, Daniel A. Barbash, Nadia D. Singh, Anthony J. Greenberg, Melanie A. Huntley, Amanda M. Larracuente, Laura K. Sirot, Timothy B. Sackton, Daniel A. Barbash, Michael B. Eisen, Roger A. Hoskins, S Celniker, Michael B. Eisen, Adrianne B. Brand, Heather Ebling, Robert David, Tao Wei, Stephanie Bosak, Barry E. Garvin, Kevin McKernan, Marc Rubenfield, Jason M. Tsolas, Matthew J. Parisi, Erik Gustafson, David J. Saranga, Douglas R. Smith, Brendan McKernan, Sam Griffiths‐Jones, Casey Bergman, David Sturgill, Brian Oliver, Michael Parisi, Yu Zhang, Therese A. Markow, Thomas D. Watts, Carlos A. Machado, Luciano M. Matzkin, Roberta Kwok, Don Gilbert, Thomas C. Kaufman, Manolis Kellis, Pouya Kheradpour, M. D. Rasmussen, Leopold Parts, M. Kellis, Alexander Stark, Leopold Parts, Alan Dupes, David B. Jaffe, Abderrahim Farina, Sante Gnerre, Nga Thi Thuy Nguyen, Terry Shea, Andrew Zimmer, Evan Mauceli, Elizabeth Ryan, Imane Bourzgui, Ngawang Sherpa, Tsering Wangdi, Norbu Dhargay, Marcia Lara, Jinlei Liu, Rebecca Reyes, Helen Vassiliev, Erica Anderson, Shangtao Liu, Tanya Mihova, Tamrat Negash, C. Strader, Teena Mehta, Cecil Rise, Will Brockman, Marc Azer, Choe Norbu, Andrew Hollinger, Stuart Degray, P Fritz, Christopher Patti, Pema Phunkhang, Adam Brown, James C. Meldrim, Lu Shi, Pasang Bachantsang, Jennifer L. Hall, Yeshi Lokyitsang, Annie Lui, Katie D'Aco, Pen MacDonald, Maura Costello, Amr Abdouelleil, Dawa Thoulutsang, Louis Meneus, Mieke Citroen, Jane Wilkinson, Kerstin Lindblad-Toh, Christina R. Gearin and 315 more - Nature 2007 cited by 2,126

  15. Regulatory Enhancer–Core-Promoter Communication via Transcription Factors and Cofactors

    Authors: Muhammad A. Zabidi, Alexander Stark - Trends in Genetics 2016 cited by 236

  16. bantam Encodes a Developmentally Regulated microRNA that Controls Cell Proliferation and Regulates the Proapoptotic Gene hid in Drosophila

    Authors: Julius Brennecke, David R. Hipfner, Alexander Stark, Robert B. Russell, Stephen M. Cohen - Cell 2003 cited by 2,048

  17. mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes

    Authors: Isabelle Behm‐Ansmant, Jan Rehwinkel, Tobias Doerks, Alexander Stark, Peer Bork, Elisa Izaurralde - Genes & Development 2006 cited by 1,017

  18. Accurate Prediction of Peptide Binding Sites on Protein Surfaces

    Authors: Evangelia Petsalaki, Alexander Stark, Eduardo Garcia Urdiales, Robert B. Russell - PLoS Computational Biology, PLoS Comput. Biol. 2009 cited by 175

  19. Genome-scale functional characterization of Drosophila developmental enhancers in vivo

    Authors: Evgeny Z. Kvon, Tomáš Kazmar, Gerald Stampfel, J. Omar Yáñez-Cuna, Michaela Pagani, Katharina Schernhuber, Barry J. Dickson, Alexander Stark - Nature 2014 cited by 512

  20. The TDRD9-MIWI2 Complex Is Essential for piRNA-Mediated Retrotransposon Silencing in the Mouse Male Germline

    Authors: Masanobu Shoji, Takashi Tanaka, Mihoko Hosokawa, Michael Reuter, Alexander Stark, Yuzuru Kato, Gen Kondoh, Katsuya Okawa, Takeshi Chujo, Tsutomu Suzuki, Kenichiro Hata, Sandra L. Martin, Toshiaki Noce, Satomi Kuramochi‐Miyagawa, Toru Nakano, Hiroyuki Sasaki, Ramesh S. Pillai, Norio Nakatsuji, Shinichiro Chuma - Developmental Cell 2009 cited by 359

  21. Assessing sufficiency and necessity of enhancer activities for gene expression and the mechanisms of transcription activation

    Authors: Rui R. Catarino, Alexander Stark - Genes & Development 2018 cited by 231

  22. Differential cofactor dependencies define distinct types of human enhancers

    Authors: Christoph Neumayr, Vanja Haberle, Leonid Serebreni, Katharina Karner, Oliver Hendy, Ann Boija, Jonathan E. Henninger, Charles H. Li, Karel Stejskal, Gen Lin, Katharina Bergauer, Michaela Pagani, Martina Rath, Karl Mechtler, Cosmas D. Arnold, Alexander Stark - Nature 2022 cited by 111

  23. An Epigenetic Role for Maternally Inherited piRNAs in Transposon Silencing

    Authors: Julius Brennecke, Colin D. Malone, Alexei A. Aravin, Ravi Sachidanandam, Alexander Stark, Gregory J. Hannon - Science 2008 cited by 796

  24. Transcriptional cofactors display specificity for distinct types of core promoters

    Authors: Vanja Haberle, Cosmas D. Arnold, Michaela Pagani, Martina Rath, Katharina Schernhuber, Alexander Stark - Nature, Nat. 2019 cited by 143