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Julia Zeitlinger

Active 1996–2024

44
Papers
18,349
Citations
37
h-index
43
i10-index

Citations

Citations per year for Julia Zeitlinger1939: 1 citations1970: 1 citations1986: 1 citations1988: 1 citations1992: 1 citations1993: 1 citations1996: 3 citations1997: 2 citations1998: 12 citations1999: 18 citations2000: 14 citations2001: 33 citations2002: 99 citations2003: 180 citations2004: 284 citations2005: 336 citations2006: 462 citations2007: 492 citations2008: 493 citations2009: 522 citations2010: 459 citations2011: 415 citations2012: 321 citations2013: 284 citations2014: 241 citations2015: 225 citations2016: 150 citations2017: 129 citations2018: 139 citations2019: 373 citations2020: 327 citations2021: 344 citations2022: 217 citations2023: 183 citations2024: 278 citations2025: 123 citations2026: 8 citations1940–1969: no citations, so these years are not shown1971–1985: no citations, so these years are not shown1987: no citations, so this year is not shown1989–1991: no citations, so these years are not shown1994–1995: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,326 citing papers, 41.6% of this breakdownChina: 554 citing papers, 6.9% of this breakdownUnited Kingdom: 541 citing papers, 6.8% of this breakdownGermany: 469 citing papers, 5.9% of this breakdownCanada: 281 citing papers, 3.5% of this breakdownFrance: 262 citing papers, 3.3% of this breakdownJapan: 231 citing papers, 2.9% of this breakdownIsrael: 181 citing papers, 2.2% of this breakdownNetherlands: 178 citing papers, 2.2% of this breakdownSpain: 176 citing papers, 2.2% of this breakdownSwitzerland: 158 citing papers, 2% of this breakdownAustralia: 154 citing papers, 1.9% of this breakdown
0%41.6%Other 18.6%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology86%
  • Medicine4.6%
  • Agricultural and Biological Sciences2.9%
  • Immunology and Microbiology1.8%
  • Computer Science1.3%
  • Neuroscience1.2%
  • Other2.2%

Topics

  • Genomics and Chromatin Dynamics13.5%
  • Epigenetics and DNA Methylation6.2%
  • Bioinformatics and Genomic Networks5.7%
  • RNA Research and Splicing5.6%
  • Gene Regulatory Network Analysis5.3%
  • Gene expression and cancer classification4.1%
  • Other59.6%

Coauthors

All papers

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  1. Short tandem repeats bind transcription factors to tune eukaryotic gene expression

    Authors: Connor A. Horton, Amr M. Alexandari, Michael G.B. Hayes, Emil Marklund, Julia M. Schaepe, Arjun K. Aditham, Nilay Shah, Peter Suzuki, Avanti Shrikumar, Ariel Afek, William J. Greenleaf, Raluca Gordân, Julia Zeitlinger, Anshul Kundaje, Polly M. Fordyce - Science 2023 cited by 194

  2. Polycomb complexes repress developmental regulators in murine embryonic stem cells

    Authors: Laurie A. Boyer, Kathrin Plath, Julia Zeitlinger, Tobias Brambrink, Lea A. Medeiros, Tong Ihn Lee, Stuart S. Levine, Marius Wernig, Adriana Tajonar, Mridula K. Ray, George W. Bell, Arie P. Otte, Miguel Vidal, David K. Gifford, Richard A. Young, Rudolf Jaenisch - Nature 2006 cited by 2,529

  3. Suppression of m6A reader Ythdf2 promotes hematopoietic stem cell expansion

    Authors: Zhenrui Li, Pengxu Qian, Wanqing Shao, Hailing Shi, Xi He, Madelaine Gogol, Zulin Yu, Yongfu Wang, Meijie Qi, Yunfei Zhu, John M. Perry, Kai Zhang, Tao Fang, Kun Zhou, Deqing Hu, Yingli Han, Chongbei Zhao, Richard Alexander, Hanzhang Xu, Shiyuan Chen, Allison Peak, Kathyrn Hall, Michael Peterson, Anoja Perera, Jeffrey S. Haug, Tari Parmely, Hua Li, Bin Shen, Julia Zeitlinger, Chuan He, Linheng Li - Cell Research 2018 cited by 262

  4. Paused RNA polymerase II inhibits new transcriptional initiation

    Authors: Wanqing Shao, Julia Zeitlinger - Nature Genetics 2017 cited by 263

  5. Transcriptional Regulatory Networks in Saccharomyces cerevisiae

    Authors: Tong Ihn Lee, Nicola J. Rinaldi, François Robert, Duncan T. Odom, Ziv Bar‐Joseph, Georg K. Gerber, Nancy M. Hannett, Christopher Harbison, Craig M. Thompson, Itamar Simon, Julia Zeitlinger, Ezra G. Jennings, Heather L. Murray, D. Benjamin Gordon, Bing Ren, John J. Wyrick, Jean‐Bosco Tagne, Thomas L. Volkert, Ernest Fraenkel, David K. Gifford, Richard A. Young - Science 2002 cited by 3,011

  6. Chromatin accessibility in the Drosophila embryo is determined by transcription factor pioneering and enhancer activation

    Authors: Kaelan Brennan, Melanie Weilert, Sabrina Krueger, Anusri Pampari, Hsiao‐Yun Liu, Ally Yang, Jason A. Morrison, Timothy R. Hughes, Christine Rushlow, Anshul Kundaje, Julia Zeitlinger - Developmental Cell 2023 cited by 78

  7. RNA polymerase is poised for activation across the genome

    Authors: Ginger W. Muse, Daniel A. Gilchrist, Sergei Nechaev, Ruchir Shah, Joel S. Parker, Sherry F. Grissom, Julia Zeitlinger, Karen Adelman - Nature Genetics 2007 cited by 755

  8. Seven myths of how transcription factors read the cis-regulatory code

    Authors: Julia Zeitlinger - Current Opinion in Systems Biology 2020 cited by 122

  9. Highly Contiguous Genome Assemblies of 15 Drosophila Species Generated Using Nanopore Sequencing

    Authors: Danny E. Miller, Cynthia Staber, Julia Zeitlinger, R. Scott Hawley - G3 Genes Genomes Genetics 2018 cited by 172

  10. Transcriptional regulatory code of a eukaryotic genome

    Authors: Christopher Harbison, D. Benjamin Gordon, Tong Ihn Lee, Nicola J. Rinaldi, Kenzie D. MacIsaac, Timothy Danford, Nancy M. Hannett, Jean‐Bosco Tagne, David Reynolds, Jane Y. Yoo, Ezra G. Jennings, Julia Zeitlinger, Dmitry Pokholok, Manolis Kellis, P. Alex Rolfe, Ken T. Takusagawa, Eric S. Lander, David K. Gifford, Ernest Fraenkel, Richard A. Young - Nature 2004 cited by 2,200

  11. RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

    Authors: Julia Zeitlinger, Alexander Stark, Manolis Kellis, Joung‐Woo Hong, Sergei Nechaev, Karen Adelman, Michael Levine, Richard A. Young - Nature Genetics 2007 cited by 777

  12. Genome-Wide Location and Function of DNA Binding Proteins

    Authors: Bing Ren, François Robert, John J. Wyrick, Oscar M. Aparicio, Ezra G. Jennings, Itamar Simon, Julia Zeitlinger, J. Schreiber, Nancy M. Hannett, Elenita I. Kanin, Thomas L. Volkert, Christopher J. Wilson, Stephen P. Bell, Richard A. Young - Science 2000 cited by 1,780

  13. ChIP-nexus enables improved detection of in vivo transcription factor binding footprints

    Authors: Qiye He, Jeffrey Johnston, Julia Zeitlinger - Nature Biotechnology 2015 cited by 288

  14. Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation

    Authors: Yujia Sun, Chung-Yi Nien, Kai Chen, Hsiao-Yun Liu, Jeffrey Johnston, Julia Zeitlinger, Christine Rushlow - Genome Research 2015 cited by 208

  15. Genome-wide Map of Nucleosome Acetylation and Methylation in Yeast

    Authors: Dmitry Pokholok, Christopher Harbison, Stuart S. Levine, Megan F. Cole, Nancy M. Hannett, Tong Ihn Lee, George W. Bell, Kimberly A. Walker, P. Alex Rolfe, Elizabeth Herbolsheimer, Julia Zeitlinger, F. Lewitter, David K. Gifford, Richard A. Young - Cell 2005 cited by 1,461

  16. A global change in RNA polymerase II pausing during the Drosophila midblastula transition

    Authors: Kai Chen, Jeffrey Johnston, Wanqing Shao, Samuel R. Meier, Cynthia Staber, Julia Zeitlinger - eLife 2013 cited by 166

  17. Paused Pol II Coordinates Tissue Morphogenesis in the Drosophila Embryo

    Authors: Mounia Lagha, Jacques P. Bothma, Emilia Esposito, Samuel Ng, Laura Michelle Stefanik, Chiahao Tsui, Jeffrey Johnston, Kai Chen, David S. Gilmour, Julia Zeitlinger, Michael Levine - Cell 2013 cited by 197

  18. Poised RNA Polymerase II Changes over Developmental Time and Prepares Genes for Future Expression

    Authors: Bjoern Gaertner, Jeffrey Johnston, Kai Chen, Nina Wallaschek, Ariel Paulson, Alexander S. Garruss, Karin Gaudenz, Bony De Kumar, Robb Krumlauf, Julia Zeitlinger - Cell Reports 2012 cited by 113

  19. TRF2, but not TBP, mediates the transcription of ribosomal protein genes

    Authors: Yuanliang Wang, Sascha H. Duttke, Kai Chen, Jeffrey Johnston, George A. Kassavetis, Julia Zeitlinger, James T. Kadonaga - Genes & Development 2014 cited by 88

  20. A Role for FACT in RNA Polymerase II Promoter-Proximal Pausing

    Authors: Theophilus T. Tettey, Xin Gao, Wanqing Shao, Hua Li, Benjamin A. Story, Alex Chitsazan, Robert L. Glaser, Zach Goode, Christopher Seidel, Ronald Conaway, Julia Zeitlinger, Marco Blanchette, Joan Conaway - Cell Reports 2019 cited by 60

  21. Short tandem repeats bind transcription factors to tune eukaryotic gene expression

    Authors: Connor A. Horton, Amr M. Alexandari, Michael G.B. Hayes, Emil Marklund, Julia M. Schaepe, Arjun K. Aditham, Nilay Shah, Avanti Shrikumar, Ariel Afek, William J. Greenleaf, Raluca Gordân, Julia Zeitlinger, Anshul Kundaje, Polly M. Fordyce - 2022 cited by 20

  22. Promoter elements associated with RNA Pol II stalling in the Drosophila embryo

    Authors: David A. Hendrix, Joung‐Woo Hong, Julia Zeitlinger, Daniel S. Rokhsar, Michael Levine - National Academy of Sciences, Proceedings of the National Academy of Sciences 2008 cited by 179

  23. Whole-genome ChIP–chip analysis of Dorsal, Twist, and Snail suggests integration of diverse patterning processes in the Drosophila embryo

    Authors: Julia Zeitlinger, Robert P. Zinzen, Alexander Stark, Manolis Kellis, Hailan Zhang, Richard A. Young, Michael Levine - Genes & Development 2007 cited by 298

  24. RNA polymerase II pausing during development

    Authors: Bjoern Gaertner, Julia Zeitlinger - Development 2014 cited by 136