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Allon M. Klein

Active 2007–2025

67
Papers
29,763
Citations
53
h-index
62
i10-index

Citations

Citations per year for Allon M. Klein1934: 1 citations1982: 1 citations1989: 2 citations1994: 1 citations2001: 1 citations2003: 2 citations2005: 2 citations2006: 1 citations2007: 11 citations2008: 20 citations2009: 18 citations2010: 31 citations2011: 110 citations2012: 126 citations2013: 161 citations2014: 155 citations2015: 202 citations2016: 234 citations2017: 314 citations2018: 571 citations2019: 1,229 citations2020: 1,792 citations2021: 1,826 citations2022: 1,693 citations2023: 1,327 citations2024: 2,016 citations2025: 1,264 citations2026: 81 citations1935–1981: no citations, so these years are not shown1983–1988: no citations, so these years are not shown1990–1993: no citations, so these years are not shown1995–2000: no citations, so these years are not shown2002: no citations, so this year is not shown2004: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 5,130 citing papers, 31.3% of this breakdownChina: 2,215 citing papers, 13.5% of this breakdownUnited Kingdom: 1,387 citing papers, 8.4% of this breakdownGermany: 1,149 citing papers, 7% of this breakdownFrance: 513 citing papers, 3.1% of this breakdownCanada: 488 citing papers, 3% of this breakdownNetherlands: 475 citing papers, 2.9% of this breakdownSwitzerland: 471 citing papers, 2.9% of this breakdownJapan: 454 citing papers, 2.8% of this breakdownItaly: 377 citing papers, 2.3% of this breakdownAustralia: 358 citing papers, 2.2% of this breakdownSweden: 325 citing papers, 2% of this breakdown
0%31.3%Other 18.6%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology49.3%
  • Medicine28.5%
  • Immunology and Microbiology12.9%
  • Neuroscience4.5%
  • Engineering2.1%
  • Agricultural and Biological Sciences0.5%
  • Other2.2%

Topics

  • Single-cell and spatial transcriptomics12.5%
  • Immune cells in cancer4.2%
  • Cancer Genomics and Diagnostics2.9%
  • Cancer Cells and Metastasis2.6%
  • Immune Cell Function and Interaction2.5%
  • Cell Image Analysis Techniques2.5%
  • Other72.8%

Coauthors

All papers

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  1. Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic Data

    Authors: Samuel L. Wolock, Romain Lopez, Allon M. Klein - Cell Systems 2019 cited by 2,925

  2. Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells

    Authors: Allon M. Klein, Linas Mažutis, Ilke Akartuna, Naren Tallapragada, Adrian Veres, Victor Li, Leonid Peshkin, David A. Weitz, Marc W. Kirschner - Cell 2015 cited by 3,733

  3. Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species

    Authors: Rapolas Žilionis, Camilla Engblom, Christina Pfirschke, Virginia Savova, David Zemmour, Hatice D. Saatcioglu, Indira Krishnan, Giorgia Maroni, Claire V. Meyerovitz, Clara M. Kerwin, Sun Kil Choi, William G. Richards, Assunta De Rienzo, Daniel G. Tenen, Raphael Bueno, Elena Levantini, Mikaël J. Pittet, Allon M. Klein - Immunity 2019 cited by 1,499

  4. CXCL9:SPP1 macrophage polarity identifies a network of cellular programs that control human cancers

    Authors: Ruben Bill, Pratyaksha Wirapati, Marius Messemaker, Whijae Roh, Béatrice Zitti, Florent Duval, Máté Kiss, Jong Chul Park, Talia M. Saal, Jan Hoelzl, David Tarussio, Fabrizio Benedetti, Stéphanie Tissot, Lana E. Kandalaft, Marco Varrone, Giovanni Ciriello, Thomas McKee, Yan Monnier, Maxime Mermod, Emily M. Blaum, Irena Gushterova, Anna Gonye, Nir Hacohen, Gad Getz, Thorsten R. Mempel, Allon M. Klein, Ralph Weissleder, William C. Faquin, Peter M. Sadow, Derrick T. Lin, Sara I. Pai, Moshe Sade-Feldman, Mikaël J. Pittet - Science 2023 cited by 614

  5. A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure

    Authors: Maayan Baron, Adrian Veres, Samuel L. Wolock, Aubrey L. Faust, Renaud Gaujoux, Amedeo Vetere, Jennifer Hyoje Ryu, Bridget K. Wagner, Shai S. Shen-Orr, Allon M. Klein, Douglas A. Melton, Itai Yanai - Cell Systems 2016 cited by 1,749

  6. A neutrophil response linked to tumor control in immunotherapy

    Authors: Jeremy Gungabeesoon, Nicolas A. Gort-Freitas, Máté Kiss, Evangelia Bolli, Marius Messemaker, Marie Siwicki, Mehdi Hicham, Ruben Bill, Peter D. Koch, Chiara Cianciaruso, Florent Duval, Christina Pfirschke, Michael Mazzola, Solange Peters, Krisztián Homicskó, Christopher Garris, Ralph Weissleder, Allon M. Klein, Mikäel J. Pittet - Cell 2023 cited by 403

  7. A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte

    Authors: Lindsey W. Plasschaert, Rapolas Žilionis, Rayman Choo-Wing, Virginia Savova, Judith Knehr, Guglielmo Roma, Allon M. Klein, Aron B. Jaffe - Nature 2018 cited by 1,133

  8. Lineage tracing meets single-cell omics: opportunities and challenges

    Authors: Daniel E. Wagner, Allon M. Klein - Nature Reviews Genetics 2020 cited by 643

  9. Lineage tracing on transcriptional landscapes links state to fate during differentiation

    Authors: Caleb Weinreb, Alejo Rodriguez-Fraticelli, Fernando D. Camargo, Allon M. Klein - Science 2020 cited by 753

  10. Intestinal Crypt Homeostasis Results from Neutral Competition between Symmetrically Dividing Lgr5 Stem Cells

    Authors: Hugo J.G. Snippert, Laurens G. van der Flier, Toshiro Sato, Johan H. van Es, Maaike van den Born, Carla Kroon-Veenboer, Nick Barker, Allon M. Klein, Jacco van Rheenen, Benjamin D. Simons, Hans Clevers - Cell 2010 cited by 2,000

  11. The emergence of transcriptional identity in somatosensory neurons

    Authors: Nikhil Sharma, Kali Flaherty, Karina Lezgiyeva, Daniel E. Wagner, Allon M. Klein, David D. Ginty - Nature 2020 cited by 555

  12. Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo

    Authors: Daniel E. Wagner, Caleb Weinreb, Zach M. Collins, James Briggs, Sean G. Megason, Allon M. Klein - Science 2018 cited by 952

  13. Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

    Authors: Bushra Raj, Daniel E. Wagner, Aaron McKenna, Shristi Pandey, Allon M. Klein, Jay Shendure, James A. Gagnon, Alexander F. Schier - Nature Biotechnology 2018 cited by 655

  14. Tumor-infiltrating dendritic cell states are conserved across solid human cancers

    Authors: Genevieve M. Gerhard, Ruben Bill, Marius Messemaker, Allon M. Klein, Mikaël J. Pittet - The Journal of Experimental Medicine 2020 cited by 242

  15. Clonal analysis of lineage fate in native haematopoiesis

    Authors: Alejo Rodriguez-Fraticelli, Samuel L. Wolock, Caleb Weinreb, Riccardo Panero, Sachin Patel, Maja Jankovic, Jianlong Sun, Raffaele Calogero, Allon M. Klein, Fernando D. Camargo - Nature 2018 cited by 599

  16. Osteoblasts remotely supply lung tumors with cancer-promoting SiglecF high neutrophils

    Authors: Camilla Engblom, Christina Pfirschke, Rapolas Žilionis, Janaina Da Silva Martins, Stijn A. Bos, Gabriel Courties, Steffen Rickelt, Nicolas Sévère, Ninib Baryawno, Julien Faget, Virginia Savova, David Zemmour, Jaclyn Kline, Marie Siwicki, Christopher Garris, Ferdinando Pucci, Hsin-Wei Liao, Yi-Jang Lin, Andita Newton, Omar Yaghi, Yoshiko Iwamoto, Benoit Tricot, Gregory R. Wojtkiewicz, Matthias Nahrendorf, Virna Cortez‐Retamozo, Etienne Meylan, Richard O. Hynes, Marie B. Demay, Allon M. Klein, Miriam A. Bredella, David T. Scadden, Ralph Weissleder, Mikaël J. Pittet - Science 2017 cited by 376

  17. A mouse model with high clonal barcode diversity for joint lineage, transcriptomic, and epigenomic profiling in single cells

    Authors: Li Li, Sarah Bowling, Sean E. McGeary, Qi Yu, Bianca Lemke, Karel P. Alcedo, Yuemeng Jia, Xugeng Liu, Mark Ferreira, Allon M. Klein, Shou‐Wen Wang, Fernando D. Camargo - Cell 2023 cited by 153

  18. Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex

    Authors: Siniša Hrvatin, Daniel R. Hochbaum, M. Aurel Nagy, Marcelo Cicconet, Keiramarie Robertson, Lucas Cheadle, Rapolas Žilionis, Alex Ratner, Rebeca Borges-Monroy, Allon M. Klein, Bernardo L. Sabatini, Michael E. Greenberg - Nature Neuroscience 2017 cited by 555

  19. Single-cell lineage tracing unveils a role for TCF15 in haematopoiesis

    Authors: Alejo Rodriguez-Fraticelli, Caleb Weinreb, Shou‐Wen Wang, Rosa Portero Migueles, Maja Jankovic, Marc Usart, Allon M. Klein, Sally Lowell, Fernando D. Camargo - Nature 2020 cited by 295

  20. Single-cell barcoding and sequencing using droplet microfluidics

    Authors: Rapolas Žilionis, Juozas Nainys, Adrian Veres, Virginia Savova, David Zemmour, Allon M. Klein, Linas Mažutis - Nature Protocols 2016 cited by 800

  21. A comprehensive single cell transcriptional landscape of human hematopoietic progenitors

    Authors: Danilo Pellin, Mariana Loperfido, Cristina Baricordi, Samuel L. Wolock, Annita Montepeloso, Olga K. Weinberg, Alessandra Biffi, Allon M. Klein, Luca Biasco - Nature Communications 2019 cited by 375

  22. The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution

    Authors: James Briggs, Caleb Weinreb, Daniel E. Wagner, Sean G. Megason, Leonid Peshkin, Marc W. Kirschner, Allon M. Klein - Science 2018 cited by 631

  23. Single-cell gene expression reveals a landscape of regulatory T cell phenotypes shaped by the TCR

    Authors: David Zemmour, Rapolas Žilionis, Evgeny Kiner, Allon M. Klein, Diane Mathis, Christophe Benoıst - Nature Immunology 2018 cited by 392

  24. Fundamental limits on dynamic inference from single-cell snapshots

    Authors: Caleb Weinreb, Samuel L. Wolock, Betsabeh Khoramian Tusi, Merav Socolovsky, Allon M. Klein - National Academy of Sciences, Proceedings of the National Academy of Sciences 2018 cited by 354