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Arend Sidow

Active 1992–2022

57
Papers
18,124
Citations
45
h-index
53
i10-index

Citations

Citations per year for Arend Sidow1928: 1 citations1970: 1 citations1972: 1 citations1974: 1 citations1981: 1 citations1989: 1 citations1990: 1 citations1993: 3 citations1994: 5 citations1995: 19 citations1996: 24 citations1997: 43 citations1998: 44 citations1999: 52 citations2000: 46 citations2001: 51 citations2002: 52 citations2003: 71 citations2004: 130 citations2005: 126 citations2006: 105 citations2007: 126 citations2008: 134 citations2009: 184 citations2010: 219 citations2011: 251 citations2012: 292 citations2013: 403 citations2014: 396 citations2015: 359 citations2016: 330 citations2017: 254 citations2018: 257 citations2019: 578 citations2020: 532 citations2021: 529 citations2022: 396 citations2023: 242 citations2024: 352 citations2025: 166 citations2026: 24 citations1929–1969: no citations, so these years are not shown1971: no citations, so this year is not shown1973: no citations, so this year is not shown1975–1980: no citations, so these years are not shown1982–1988: no citations, so these years are not shown1991–1992: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,510 citing papers, 31.1% of this breakdownUnited Kingdom: 860 citing papers, 7.6% of this breakdownChina: 804 citing papers, 7.1% of this breakdownGermany: 686 citing papers, 6.1% of this breakdownFrance: 497 citing papers, 4.4% of this breakdownCanada: 488 citing papers, 4.3% of this breakdownAustralia: 333 citing papers, 3% of this breakdownSpain: 317 citing papers, 2.8% of this breakdownItaly: 302 citing papers, 2.7% of this breakdownNetherlands: 283 citing papers, 2.5% of this breakdownJapan: 278 citing papers, 2.5% of this breakdownSwitzerland: 232 citing papers, 2.1% of this breakdown
0%31.1%Other 23.8%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology72.7%
  • Medicine12.2%
  • Agricultural and Biological Sciences4.8%
  • Immunology and Microbiology3.2%
  • Neuroscience2.3%
  • Computer Science1.8%
  • Other3%

Topics

  • Genomics and Chromatin Dynamics7.5%
  • Genomics and Phylogenetic Studies7.4%
  • RNA and protein synthesis mechanisms3.8%
  • Epigenetics and DNA Methylation3.8%
  • Genomics and Rare Diseases3.4%
  • RNA Research and Splicing3.1%
  • Other71%

Coauthors

All papers

Open in search
  1. ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

    Authors: Stephen G. Landt, Georgi K. Marinov, Anshul Kundaje, Pouya Kheradpour, Florencia Pauli, Serafim Batzoglou, B Bernstein, Peter J. Bickel, James B. Brown, Philip Cayting, Yiwen Chen, Gilberto DeSalvo, Charles B. Epstein, Katherine Fisher-Aylor, Ghia Euskirchen, Mark Gerstein, Jason Gertz, Alexander J. Hartemink, Michael M. Hoffman, Vishwanath R. Iyer, Youngsook L. Jung, Subhradip Karmakar, Manolis Kellis, Peter V. Kharchenko, Qunhua Li, Tao Liu, X. Shirley Liu, Lijia Ma, Aleksandar Milosavljevic, R Myers, Peter J. Park, Michael J. Pazin, Marc D. Perry, Debasish Raha, Timothy E. Reddy, Joel Rozowsky, Noam Shoresh, Arend Sidow, Matthew Slattery, J Stamatoyannopoulos, Michael Tolstorukov, Kevin P. White, Simon Xi, Peggy Farnham, Jason D. Lieb, B Wold, M Snyder - Genome Research 2012 cited by 2,223

  2. Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++

    Authors: Eugene Davydov, David L. Goode, Marina Sirota, Gregory M. Cooper, Arend Sidow, Serafim Batzoglou - PLoS Computational Biology, PLoS Comput. Biol. 2010 cited by 1,877

  3. Benchmarking challenging small variants with linked and long reads

    Authors: Justin Wagner, Nathan D. Olson, Lindsay Harris, Ziad Khan, Jesse Farek, Medhat Mahmoud, Ana Stanković, Vladimir Kovačević, Byunggil Yoo, Neil Miller, Jeffrey Rosenfeld, Bohan Ni, Samantha Zarate, Melanie Kirsche, Sergey Aganezov, Michael C. Schatz, Giuseppe Narzisi, Marta Byrska-Bishop, Wayne E. Clarke, Uday S. Evani, Charles Markello, Kishwar Shafin, Xin Zhou, Arend Sidow, Vikas Bansal, Peter Ebert, Tobias Marschall, Peter M. Lansdorp, Vincent C. T. Hanlon, Carl-Adam Mattsson, Álvaro Martínez Barrio, Ian T. Fiddes, Chunlin Xiao, Arkarachai Fungtammasan, Chen-Shan Chin, Aaron M. Wenger, William J. Rowell, Fritz J. Sedlazeck, Andrew Carroll, Marc Salit, Justin M. Zook - Cell Genomics 2022 cited by 209

  4. Architecture of the human regulatory network derived from ENCODE data

    Authors: Mark Gerstein, Anshul Kundaje, Manoj Hariharan, Stephen G. Landt, Koon‐Kiu Yan, Chao Cheng, Xinmeng Jasmine Mu, Ekta Khurana, Joel Rozowsky, Roger P. Alexander, Renqiang Min, Pedro Alves, Alexej Abyzov, Nick Addleman, Nitin Bhardwaj, Alan P. Boyle, Philip Cayting, Alexandra Charos, David Ziyou Chen, Yong Cheng, Declan Clarke, Catharine Eastman, Ghia Euskirchen, Seth Frietze, Yao Fu, Jason Gertz, Fabian Grubert, Arif Harmanci, Preti Jain, Maya Kasowski, Phil Lacroute, Jing Leng, Jin Lian, Hannah Monahan, Henriette O’Geen, Zhengqing Ouyang, E. Christopher Partridge, Dorrelyn Patacsil, Florencia Pauli, Debasish Raha, Lucı́a Ramı́rez, Timothy E. Reddy, Brian D. Reed, Minyi Shi, Teri Slifer, Jing Wang, Linfeng Wu, Xinqiong Yang, Kevin Y. Yip, Gili Zilberman-Schapira, Serafim Batzoglou, Arend Sidow, Peggy Farnham, R Myers, Sherman M. Weissman, M Snyder - Nature 2012 cited by 1,561

  5. Multi-omic tumor data reveal diversity of molecular mechanisms that correlate with survival

    Authors: Daniele Ramazzotti, Avantika Lal, Bo Wang, Serafim Batzoglou, Arend Sidow - Nature Communications 2018 cited by 208

  6. Determinants of nucleosome organization in primary human cells

    Authors: Anton Valouev, Steven Johnson, Scott D. Boyd, Cheryl L. Smith, Andrew Fire, Arend Sidow - Nature 2011 cited by 726

  7. Distribution and intensity of constraint in mammalian genomic sequence

    Authors: Gregory M. Cooper, Eric A. Stone, George Asimenos, Eric D. Green, Serafim Batzoglou, Arend Sidow - Genome Research 2005 cited by 1,444

  8. Global genomic profiling reveals an extensive p53-regulated autophagy program contributing to key p53 responses

    Authors: Daniela Kenzelmann Brož, Stephano S. Mello, Kathryn T. Bieging, Dadi Jiang, Rachel L. Dusek, Colleen A. Brady, Arend Sidow, Laura D. Attardi - Genes & Development 2013 cited by 448

  9. LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA

    Authors: Michael Brudno, Chuong B. Do, Gregory M. Cooper, Michael F. Kim, Eugene Davydov, NISC Comparative Sequencing Program, Eric D. Green, Arend Sidow, Serafim Batzoglou - Genome Research 2003 cited by 1,154

  10. The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

    Authors: Stephen B. Montgomery, David L. Goode, Erika Kvikstad, Cornelis A. Albers, Zhengdong D. Zhang, Xinmeng Jasmine Mu, Guruprasad Ananda, Bryan Howie, Konrad J. Karczewski, Kevin S. Smith, Vanessa Anaya, Rhea Richardson, Joe R. Davis, Daniel G. MacArthur, Arend Sidow, Laurent Duret, Mark Gerstein, Kateryna D. Makova, Jonathan Marchini, Gil McVean, Gerton Lunter - Genome Research 2013 cited by 277

  11. Lineage-specific enhancers activate self-renewal genes in macrophages and embryonic stem cells

    Authors: Erinn Soucié, Ziming Weng, Laufey Geirsdóttir, Kaaweh Molawi, Julien Maurizio, Romain Fenouil, Noushin Mossadegh‐Keller, Grégory Gimenez, Laurent Vanhille, Meryam Beniazza, Jérémy Favret, Carole Berruyer-Pouyet, Pierre Perrin, Nir Hacohen, Jean‐Christophe Andrau, Pierre Ferrier, Patrice Dubreuil, Arend Sidow, Michael H. Sieweke - Science 2016 cited by 256

  12. A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

    Authors: Anton Valouev, Jeffrey K. Ichikawa, Thaisan Tonthat, Jeremy Stuart, Swati Ranade, Heather E. Peckham, Kathy Zeng, Joel A. Malek, Gina L. Costa, Kevin McKernan, Arend Sidow, Andrew Fire, Steven Johnson - Genome Research 2008 cited by 578

  13. Physicochemical constraint violation by missense substitutions mediates impairment of protein function and disease severity

    Authors: Eric A. Stone, Arend Sidow - Genome Research 2005 cited by 428

  14. Extensive sequencing of seven human genomes to characterize benchmark reference materials

    Authors: Justin M. Zook, David Catoe, Jennifer McDaniel, Lindsay Vang, Noah Spies, Arend Sidow, Ziming Weng, Yuling Liu, Chris Mason, Noah Alexander, Elizabeth Hénaff, Feng Chen, Erich Jaeger, Ali Moshrefi, Khoa Pham, William Stedman, Tiffany Y Liang, Michael Saghbini, Željko Džakula, Alex Hastie, Han Cao, Gintaras Deikus, Eric Schadt, Robert Sebra, Ali Bashir, Rebecca Truty, Christopher Chang, Natali Gulbahce, Keyan Zhao, Srinka Ghosh, Fiona Hyland, Yutao Fu, Mark Chaisson, Chunlin Xiao, Jonathan Trow, Stephen T. Sherry, Alexander Wait Zaranek, Mad Price Ball, Jason Bobe, Preston W. Estep, George M. Church, Patrick Marks, Sofia Kyriazopoulou-Panagiotopoulou, Grace Zheng, Michael Schnall-Levin, Heather Ordonez, Patrice A. Mudivarti, Kristina Giorda, Ying Sheng, Karoline Bjarnesdatter Rypdal, Marc Salit - 2015 cited by 116

  15. Jarid2/Jumonji Coordinates Control of PRC2 Enzymatic Activity and Target Gene Occupancy in Pluripotent Cells

    Authors: Jamy C. Peng, Anton Valouev, Tomek Swigut, Junmei Zhang, Yingming Zhao, Arend Sidow, Joanna Wysocka - Cell 2009 cited by 538

  16. SHRiMP: Accurate Mapping of Short Color-space Reads

    Authors: Stephen M. Rumble, Phil Lacroute, Adrian V. Dalca, Marc Fiume, Arend Sidow, Michael Brudno - PLoS Computational Biology, PLoS Comput. Biol. 2009 cited by 590

  17. svviz: a read viewer for validating structural variants

    Authors: Noah Spies, Justin M. Zook, Marc L. Salit, Arend Sidow - Bioinformatics, Bioinform. 2015 cited by 61

  18. Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

    Authors: Anton Valouev, David S. Johnson, Andreas Sundquist, Catherine Medina, Elizabeth D. Anton, Serafim Batzoglou, R Myers, Arend Sidow - Nature Methods 2008 cited by 696

  19. Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements

    Authors: Anshul Kundaje, Sofia Kyriazopoulou-Panagiotopoulou, Max Libbrecht, Cheryl L. Smith, Debasish Raha, Elliott E. Winters, Steven Johnson, M Snyder, Serafim Batzoglou, Arend Sidow - Genome Research 2012 cited by 201

  20. Gene duplications and the origins of vertebrate development

    Authors: Peter W. H. Holland, Jordi García‐Fernàndez, Nic A. Williams, Arend Sidow - Development 1994 cited by 970

  21. High-quality genome sequences of uncultured microbes by assembly of read clouds

    Authors: Alex Bishara, Eli L. Moss, Mikhail Kolmogorov, Alma E. Parada, Ziming Weng, Arend Sidow, Anne Dekas, Serafim Batzoglou, Ami S. Bhatt - Nature Biotechnology 2018 cited by 138

  22. Genome evolution during progression to breast cancer

    Authors: Daniel E. Newburger, Dorna Kashef-Haghighi, Ziming Weng, Raheleh Salari, Robert T. Sweeney, Alayne Brunner, Shirley Zhu, Xiangqian Guo, Sushama Varma, Megan L. Troxell, Robert B. West, Serafim Batzoglou, Arend Sidow - Genome Research 2013 cited by 115

  23. Benchmarking challenging small variants with linked and long reads

    Authors: Justin Wagner, Nathan D. Olson, Lindsay Harris, Jennifer McDaniel, Ziad Khan, Jesse Farek, Medhat Mahmoud, Ana Stanković, Vladimir Kovačević, Byunggil Yoo, Neil Miller, Jeffrey Rosenfeld, Bohan Ni, Samantha Zarate, Melanie Kirsche, Sergey Aganezov, Michael C. Schatz, Giuseppe Narzisi, Marta Byrska-Bishop, Wayne E. Clarke, Uday S. Evani, Charles Markello, Kishwar Shafin, Xin Zhou, Arend Sidow, Vikas Bansal, Peter Ebert, Tobias Marschall, Peter M. Lansdorp, Vincent C. T. Hanlon, Carl-Adam Mattsson, Álvaro Martínez Barrio, Ian T. Fiddes, Chunlin Xiao, Arkarachai Fungtammasan, Chen-Shan Chin, Aaron M. Wenger, William J. Rowell, Fritz J. Sedlazeck, Andrew Carroll, Marc Salit, Justin M. Zook - 2020 cited by 60

  24. Comprehensive genomic characterization of breast tumors with BRCA1 and BRCA2 mutations

    Authors: Avantika Lal, Daniele Ramazzotti, Ziming Weng, Keli Liu, James M. Ford, Arend Sidow - BMC Medical Genomics 2019 cited by 30