Gregory M. Cooper
Active 2001–2024
- 109
- Papers
- 38,609
- Citations
- 72
- h-index
- 102
- i10-index
Citations
Citation sources
Countries
Institutions
- Harvard University1.1%
- University of Washington0.8%
- Broad Institute0.7%
- Inserm0.7%
- Baylor College of Medicine0.6%
- Howard Hughes Medical Institute0.6%
- Other95.5%
Fields
- Biochemistry, Genetics and Molecular Biology61.9%
- Medicine23.9%
- Neuroscience5.3%
- Immunology and Microbiology2.4%
- Agricultural and Biological Sciences1.4%
- Engineering1.4%
- Other3.7%
Topics
- Genomics and Rare Diseases8.1%
- Genomic variations and chromosomal abnormalities5.1%
- Genetic Associations and Epidemiology4.2%
- Genomics and Phylogenetic Studies3.7%
- Genetics and Neurodevelopmental Disorders3.1%
- Genomics and Chromatin Dynamics2.3%
- Other73.5%
Coauthors
- Susan M. Hiatt20
- Kevin M. Bowling18
- Michelle L. Thompson15
- James M.J. Lawlor14
- Candice R. Finnila13
- E. Martina Bebin12
- Whitley V. Kelley12
- Kelly M. East11
- R Myers11
- Evan E. Eichler10
- Stacy W. Gray10
- Deborah A. Nickerson9
- Jay Shendure9
- Arend Sidow8
- Gregory S. Barsh8
- Heather C. Mefford8
- Bruce R. Korf7
- Laura M. Amendola7
- Michelle D. Amaral7
- Anna Hurst6
- Carl Baker6
- Donald R. Latner6
- J. Nicholas Cochran6
- Johnny Huard6
All papers
- A general framework for estimating the relative pathogenicity of human genetic variants
Authors: Martin Kircher, Daniela Witten, Preti Jain, Brian J. O’Roak, Gregory M. Cooper, Jay Shendure - Nature Genetics 2014 cited by 6,554
- Yehudi: An Orchestrated System for the Interoperability of Urban Data and Models
Authors: Philipp Rentzsch, Daniela M. Witten, Gregory M. Cooper, Jay Shendure, Martin Kircher - Nucleic Acids Research, Nucleic Acids Res. 2001 cited by 3,880
- Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++
Authors: Eugene Davydov, David L. Goode, Marina Sirota, Gregory M. Cooper, Arend Sidow, Serafim Batzoglou - PLoS Computational Biology, PLoS Comput. Biol. 2010 cited by 1,877
- Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways
Authors: Elizabeth T. Cirulli, Brittany N. Lasseigne, Slavé Petrovski, Peter C. Sapp, Patrick A. Dion, Claire S. Leblond, Julien Couthouis, Yifan Lu, Quanli Wang, Brian J. Krueger, Zhong Ren, Jonathan Keebler, Yujun Han, Shawn Levy, Braden Boone, Jack R. Wimbish, Lindsay L. Waite, Angela L. Jones, John P. Carulli, Kelly L. Williams, John F. Staropoli, Winnie Xin, Alessandra Chesi, Alya R. Raphael, Diane McKenna‐Yasek, Janet Cady, J.M.B.V. de Jong, Kevin P. Kenna, Bradley Smith, Simon Topp, Jack W. Miller, Soragia Athina Gkazi, Ammar Al‐Chalabi, Leonard H. van den Berg, Jan H. Veldink, Vincenzo Silani, Nicola Ticozzi, Christopher E. Shaw, Robert H. Baloh, Stanley H. Appel, Ericka Simpson, Clotilde Lagier‐Tourenne, Stefan M. Pulst, Summer Gibson, John Q. Trojanowski, Lauren Elman, Leo McCluskey, Murray Grossman, Neil A. Shneider, Wendy K. Chung, John Ravits, Jonathan D. Glass, Katherine B. Sims, Vivianna M. Van Deerlin, Tom Maniatis, Sebastian Hayes, Alban Ordureau, Sharan Swarup, John E. Landers, Frank Baas, Andrew S. Allen, Richard Bedlack, J. Wade Harper, Aaron D. Gitler, Guy A. Rouleau, Robert H. Brown, Matthew B. Harms, Gregory M. Cooper, Tim Harris, R Myers, David B. Goldstein - Science 2015 cited by 992
- A copy number variation morbidity map of developmental delay
Authors: Gregory M. Cooper, Bradley P. Coe, Santhosh Girirajan, Jill A. Rosenfeld, Tiffany Vu, Carl Baker, Charles A. Williams, Heather Stalker, Rizwan Hamid, Vickie Hannig, Hoda Abdel‐Hamid, Patricia I. Bader, Elizabeth McCracken, Dmitriy Niyazov, Kathleen A. Leppig, Heidi Thiese, Marybeth Hummel, Nora Alexander, Jerome L. Gorski, Jennifer Kussmann, Vandana Shashi, Krys Johnson, Catherine Rehder, Blake C. Ballif, Lisa G. Shaffer, Evan E. Eichler - Nature Genetics 2011 cited by 1,404
- Massively parallel functional dissection of mammalian enhancers in vivo
Authors: Rupali P Patwardhan, Joseph B. Hiatt, Daniela Witten, Mee J. Kim, Robin P. Smith, Dalit May, Choli Lee, Jennifer M. Andrie, Su In Lee, Gregory M. Cooper, Nadav Ahituv, L Pennacchio, Jay Shendure - Nature Biotechnology 2012 cited by 584
- Single-cell multi-cohort dissection of the schizophrenia transcriptome
Authors: W. Brad Ruzicka, Shahin Mohammadi, John F. Fullard, José Dávila-Velderrain, Sivan Subburaju, Daniel Reed Tso, Makayla Hourihan, Shan Jiang, Hao-Chih Lee, Jaroslav Bendl, Georgios Voloudakis, Vahram Haroutunian, Gabriel E. Hoffman, Panos Roussos, Manolis Kellis, Schahram Akbarian, Alexej Abyzov, Nadav Ahituv, Dhivya Arasappan, José Juan Almagro Armenteros, Brian J. Beliveau, Sabina Berretta, Rahul Bharadwaj, Arjun Bhattacharya, Lucy Bicks, Kristen Brennand, Davide Capauto, Frances A. Champagne, Tanima Chatterjee, Chris Chatzinakos, Yuhang Chen, H. Isaac Chen, Yuyan Cheng, Lijun Cheng, Andrew Chess, Jo-fan Chien, Zhiyuan Chu, Declan Clarke, Ashley Clement, Leonardo Collado‐Torres, Gregory M. Cooper, Gregory E. Crawford, Rujia Dai, Nikolaos P. Daskalakis, Amy Deep‐Soboslay, Chengyu Deng, Christopher P. DiPietro, Stella Dracheva, Shiron Drusinsky, Ziheng Duan, Duc M. Duong, Cagatay Dursun, Nicholas J. Eagles, Jonathan I. Edelstein, Prashant S. Emani, Kiki Galani, Timur R. Galeev, Michael J. Gandal, Sophia C. Gaynor, Mark Gerstein, Daniel H. Geschwind, Kiran Girdhar, Fernando S. Goes, William Greenleaf, Jennifer Grundman, Hanmin Guo, Qiuyu Guo, Chirag Gupta, Yoav Hadas, Joachim Hallmayer, Xikun Han, Natalie Hawken, Chuan He, Ella Henry, Stephanie C. Hicks, Marcus Ho, Li‐Lun Ho, Yi‐Ling Huang, Louise A. Huuki-Myers, Ahyeon Hwang, Thomas M. Hyde, Artemis Iatrou, Fumitaka Inoue, Aarti Jajoo, Matthew L. Jensen, Lihua Jiang, Peng Jin, Ting Jin, Connor Jops, Alexandre Jourdon, Riki Kawaguchi, Joel E. Kleinman, Steven P. Kleopoulos, Alexey Kozlenkov, Arnold R. Kriegstein, Anshul Kundaje, Soumya Kundu, Che-Yu Lee, Donghoon Lee, Junhao Li and 119 more - Science 2024 cited by 131
- Distribution and intensity of constraint in mammalian genomic sequence
Authors: Gregory M. Cooper, Eric A. Stone, George Asimenos, Eric D. Green, Serafim Batzoglou, Arend Sidow - Genome Research 2005 cited by 1,444
- Exome sequencing identifies MLL2 mutations as a cause of Kabuki syndrome
Authors: Sarah Ng, Abigail W. Bigham, Kati J. Buckingham, Mark Hannibal, Margaret J. McMillin, Heidi Gildersleeve, Anita E. Beck, Holly K. Tabor, Gregory M. Cooper, Heather C Mefford, Choli Lee, Emily H. Turner, Joshua D. Smith, Mark J. Rieder, Koh-ichiro Yoshiura, Naomichi Matsumoto, Tohru Ohta, Norio Niikawa, Deborah A. Nickerson, Michael J. Bamshad, Jay Shendure - Nature Genetics 2010 cited by 1,355
- Guidelines for investigating causality of sequence variants in human disease
Authors: Daniel G. MacArthur, Teri A. Manolio, David Dimmock, Heidi L. Rehm, Jay Shendure, Gonçalo R. Abecasis, David R. Adams, Russ B. Altman, Stylianos E. Antonarakis, Euan A. Ashley, Jeffrey C. Barrett, Leslie G. Biesecker, Don F. Conrad, Gregory M. Cooper, Nancy J. Cox, Mark J. Daly, Mark Gerstein, David B. Goldstein, Joel N. Hirschhorn, Suzanne M. Leal, L Pennacchio, J Stamatoyannopoulos, Shamil Sunyaev, David Valle, Benjamin F. Voight, Wendy Winckler, Chris Gunter - Nature 2014 cited by 1,288
- Rare Structural Variants Disrupt Multiple Genes in Neurodevelopmental Pathways in Schizophrenia
Authors: Tom Walsh, Jon McClellan, Shane McCarthy, Anjené Addington, Sarah B. Pierce, Gregory M. Cooper, Alex S. Nord, Mary Kusenda, Dheeraj Malhotra, Abhishek Bhandari, Sunday M. Stray, Caitlin Rippey, Patricia Roccanova, Vlad Makarov, B. Lakshmi, Robert L. Findling, Linmarie Sikich, T Stromberg, Barry Merriman, Nitin Gogtay, Philip Butler, Kristen Eckstrand, Laila Noory, Peter Gochman, Robert T. Long, Zugen Chen, Sean Davis, Carl Baker, Evan E. Eichler, Paul S. Meltzer, Stanley F. Nelson, Andrew Singleton, Ming K. Lee, Judith L. Rapoport, Mary‐Claire King, Jonathan Sebat - Science 2008 cited by 1,832
- Distinct Properties of Cell-Type-Specific and Shared Transcription Factor Binding Sites
Authors: Jason Gertz, Daniel Savic, Katherine E. Varley, E. Christopher Partridge, Alexias Safi, Preti Jain, Gregory M. Cooper, Timothy E. Reddy, Gregory E. Crawford, R Myers - Molecular Cell 2013 cited by 422
- A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
Authors: Fumitaka Inoue, Martin Kircher, Beth Martin, Gregory M. Cooper, Daniela Witten, Michael T. McManus, Nadav Ahituv, Jay Shendure - Genome Research 2016 cited by 360
- LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA
Authors: Michael Brudno, Chuong B. Do, Gregory M. Cooper, Michael F. Kim, Eugene Davydov, NISC Comparative Sequencing Program, Eric D. Green, Arend Sidow, Serafim Batzoglou - Genome Research 2003 cited by 1,154
- Massively parallel characterization of regulatory elements in the developing human cortex
Authors: Chengyu Deng, Sean Whalen, Marilyn Steyert, Ryan Ziffra, Pawel F. Przytycki, Fumitaka Inoue, Daniela A. Pereira, Davide Capauto, Scott Norton, Flora M. Vaccarino, Alex A. Pollen, Tomasz J. Nowakowski, Nadav Ahituv, Katherine S. Pollard, Schahram Akbarian, Alexej Abyzov, Nadav Ahituv, Dhivya Arasappan, José Juan Almagro Armenteros, Brian J. Beliveau, Jaroslav Bendl, Sabina Berretta, Rahul Bharadwaj, Arjun Bhattacharya, Lucy Bicks, Kristen Brennand, Davide Capauto, Frances A. Champagne, Tanima Chatterjee, Chris Chatzinakos, Yuhang Chen, H. Isaac Chen, Yuyan Cheng, Lijun Cheng, Andrew Chess, Jo-fan Chien, Zhiyuan Chu, Declan Clarke, Ashley Clement, Leonardo Collado‐Torres, Gregory M. Cooper, Gregory E. Crawford, Rujia Dai, Nikolaos P. Daskalakis, José Dávila-Velderrain, Amy Deep‐Soboslay, Chengyu Deng, Christopher P. DiPietro, Stella Dracheva, Shiron Drusinsky, Ziheng Duan, Duc M. Duong, Cagatay Dursun, Nicholas J. Eagles, Jonathan I. Edelstein, Prashant S. Emani, John F. Fullard, Kiki Galani, Timur R. Galeev, Michael J. Gandal, Sophia C. Gaynor, Mark Gerstein, Daniel H. Geschwind, Kiran Girdhar, Fernando S. Goes, William J. Greenleaf, Jennifer Grundman, Hanmin Guo, Qiuyu Guo, Chirag Gupta, Yoav Hadas, Joachim Hallmayer, Xikun Han, Vahram Haroutunian, Natalie Hawken, Chuan He, Ella Henry, Stephanie C. Hicks, Marcus Ho, Li‐Lun Ho, Gabriel E. Hoffman, Yi‐Ling Huang, Louise A. Huuki-Myers, Ahyeon Hwang, Thomas M. Hyde, Artemis Iatrou, Fumitaka Inoue, Aarti Jajoo, Matthew L. Jensen, Lihua Jiang, Jin Peng, Ting Jin, Connor Jops, Alexandre Jourdon, Riki Kawaguchi, Manolis Kellis, Saniya Khullar, Joel E. Kleinman, Steven P. Kleopoulos, Alexey Kozlenkov and 131 more - Science 2024 cited by 65
- Genomic diagnosis for children with intellectual disability and/or developmental delay
Authors: Kevin M. Bowling, Michelle L. Thompson, Michelle D. Amaral, Candice R. Finnila, Susan M. Hiatt, Krysta L. Engel, J. Nicholas Cochran, Kyle B. Brothers, Kelly M. East, Stacy W. Gray, Whitley V. Kelley, Neil E. Lamb, Edward J. Lose, Carla A. Rich, Shirley Simmons, Jana Whittle, Benjamin T. Weaver, Amy S. Nesmith, R Myers, Gregory S. Barsh, E. Martina Bebin, Gregory M. Cooper - Genome Medicine 2017 cited by 282
- A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex
Authors: Louise A. Huuki-Myers, Abby Spangler, Nicholas J. Eagles, Kelsey D. Montgomery, Sang Ho Kwon, Boyi Guo, Melissa Grant‐Peters, Heena R. Divecha, Madhavi Tippani, Chaichontat Sriworarat, Annie B. Nguyen, Prashanthi Ravichandran, Matthew N. Tran, Arta Seyedian, Thomas M. Hyde, Joel E. Kleinman, Alexis Battle, Stephanie C. Page, Mina Ryten, Stephanie C. Hicks, Keri Martinowich, Leonardo Collado‐Torres, Kristen R. Maynard, Schahram Akbarian, Alexej Abyzov, Nadav Ahituv, Dhivya Arasappan, José Juan Almagro Armenteros, Brian J. Beliveau, Jaroslav Bendl, Sabina Berretta, Rahul Bharadwaj, Arjun Bhattacharya, Lucy Bicks, Kristen Brennand, Davide Capauto, Frances A. Champagne, Tanima Chatterjee, Chris Chatzinakos, Yuhang Chen, H. Isaac Chen, Yuyan Cheng, Lijun Cheng, Andrew Chess, Jo-fan Chien, Zhiyuan Chu, Declan Clarke, Ashley Clement, Leonardo Collado‐Torres, Gregory M. Cooper, Gregory E. Crawford, Rujia Dai, Nikolaos P. Daskalakis, José Dávila-Velderrain, Amy Deep‐Soboslay, Chengyu Deng, Christopher P. DiPietro, Stella Dracheva, Shiron Drusinsky, Ziheng Duan, Duc M. Duong, Cagatay Dursun, Nicholas J. Eagles, Jonathan I. Edelstein, Prashant S. Emani, John F. Fullard, Kiki Galani, Timur R. Galeev, Michael J. Gandal, Sophia C. Gaynor, Mark Gerstein, Daniel H. Geschwind, Kiran Girdhar, Fernando S. Goes, William Greenleaf, Jennifer Grundman, Hanmin Guo, Qiuyu Guo, Chirag Gupta, Yoav Hadas, Joachim Hallmayer, Xikun Han, Vahram Haroutunian, Natalie Hawken, Chuan He, Ella Henry, Stephanie C. Hicks, Marcus Ho, Li‐Lun Ho, Gabriel E. Hoffman, Yi‐Ling Huang, Louise A. Huuki-Myers, Ahyeon Hwang, Thomas M. Hyde, Artemis Iatrou, Fumitaka Inoue, Aarti Jajoo, Matthew Jensen, Lihua Jiang, Peng Jin and 135 more - Science 2024 cited by 65
- Performance of ACMG-AMP Variant-Interpretation Guidelines among Nine Laboratories in the Clinical Sequencing Exploratory Research Consortium
Authors: Laura M. Amendola, Gail P. Jarvik, Michael C. Leo, Heather M. McLaughlin, Yassmine Akkari, Michelle D. Amaral, Jonathan S. Berg, Sawona Biswas, Kevin M. Bowling, Laura K. Conlin, Gregory M. Cooper, Michael O. Dorschner, Matthew C. Dulik, Arezou A. Ghazani, Rajarshi Ghosh, Robert C. Green, Ragan Hart, Carolyn Horton, Jennifer J. Johnston, Matthew S. Lebo, Aleksandar Milosavljević, Jeffrey Ou, Christine M. Pak, Ronak Y. Patel, Sumit Punj, Carolyn Sue Richards, Joseph S Salama, Natasha T. Strande, Yaping Yang, Sharon E. Plon, Leslie G. Biesecker, Heidi L. Rehm - The American Journal of Human Genetics 2016 cited by 580
- Aberrant Inclusion of a Poison Exon Causes Dravet Syndrome and Related SCN1A-Associated Genetic Epilepsies
Authors: Gemma L. Carvill, Krysta L. Engel, Aishwarya Ramamurthy, J. Nicholas Cochran, Jolien Roovers, Hannah Stamberger, Nicholas Lim, Amy Schneider, Georgie Hollingsworth, Dylan H. Holder, Brigid M. Regan, James M.J. Lawlor, Lieven Lagae, Berten Ceulemans, E. Martina Bebin, John Nguyen, Gregory S. Barsh, Sarah Weckhuysen, Miriam H. Meisler, Samuel F. Berkovic, Peter De Jonghe, Ingrid E. Scheffer, R Myers, Gregory M. Cooper, Heather C. Mefford, Pasquale Striano, Federico Zara, Ingo Helbig, Rikke S. Møller, Sarah von Spiczak, Hiltrud Muhle, Hande Çağlayan, Katalin Štěrbová, Dana Craiu, Dorota Hoffman, Anna‐Elina Lehesjoki, Kaja Kristine Selmer, Christel Depienne, Johannes R. Lemke, Carla Marini, Renzo Guerrini, Bernd A. Neubauer, Tiina Talvik, Eric Leguern, Peter De Jonghe, Sarah Weckhuysen - The American Journal of Human Genetics 2018 cited by 122
- Genome sequencing as a first-line diagnostic test for hospitalized infants
Authors: Kevin M. Bowling, Michelle L. Thompson, Candice R. Finnila, Susan M. Hiatt, Donald R. Latner, Michelle D. Amaral, James M.J. Lawlor, Kelly M. East, Meagan E. Cochran, Veronica Greve, Whitley V. Kelley, Stacy W. Gray, Stephanie A. Felker, Hannah Meddaugh, Ashley Cannon, Amanda Luedecke, Kelly E. Jackson, Laura G. Hendon, Hillary M. Janani, Marla Johnston, Lee Ann Merin, Sarah Deans, Carly Tuura, Heather Williams, Kelly Laborde, Matthew B. Neu, Jessica Patrick‐Esteve, Anna Hurst, Jegen Kandasamy, Wally Carlo, Kyle B. Brothers, Brian Kirmse, Renate Savich, Duane Superneau, Steven B. Spedale, Sara J. Knight, Gregory S. Barsh, Bruce R. Korf, Gregory M. Cooper - Genetics in Medicine 2021 cited by 56
- University of Kentucky Sanders-Brown Healthy Brain Aging Volunteers: Donor Characteristics, Procedures and Neuropathology
Authors: Frederick A. Schmitt, Peter T. Nelson, Erin L. Abner, Stephen W. Scheff, Gregory A. Jicha, Charles D. Smith, Gregory M. Cooper, Marta Mendiondo, Deborah D. Danner, Linda J. Van Eldik, Allison Caban‐Holt, Mark A. Lovell, Richard J. Kryscio - Current Alzheimer Research 2012 cited by 192
- Long-read genome sequencing for the molecular diagnosis of neurodevelopmental disorders
Authors: Susan M. Hiatt, James M.J. Lawlor, Lori H. Handley, Ryne C. Ramaker, Brianne B. Rogers, E. Christopher Partridge, Lori Beth Boston, Melissa Williams, Christopher Plott, Jerry Jenkins, Stacy W. Gray, James Holt, Kevin M. Bowling, E. Martina Bebin, Jane Grimwood, Jeremy Schmutz, Gregory M. Cooper - Human Genetics and Genomics Advances 2021 cited by 57
- Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans
Authors: Sekar Kathiresan, Olle Melander, Candace Guiducci, Aarti Surti, Noël P. Burtt, Mark J. Rieder, Gregory M. Cooper, Charlotta Roos, Benjamin F. Voight, Aki S. Havulinna, Björn Wahlstrand, Thomas Hedner, Dolores Corella, E Shyong Tai, José M. Ordovás, Göran Berglund, Erkki Vartiainen, Pekka Jousilahti, Bo Hedblad, Marja‐Riitta Taskinen, Christopher Newton‐Cheh, Veikko Salomaa, Leena Peltonen, Leif Groop, David Altshuler, Marju Orho‐Melander - Nature Genetics 2008 cited by 1,407
- A general framework for estimating the relative pathogenicity of human genetic variants
Authors: Martin Kircher, Daniela Witten, Gregory M. Cooper, Jay Shendure - F1000Research 2014 cited by 229
