Timothy E. Reddy

Authors: Michael J. Gandal, Pan Zhang, Evi Hadjimichael, Rebecca L. Walker, Chao Chen, Shuang Liu, Hyejung Won, Harm van Bakel, Merina Varghese, Yongjun Wang, Annie W. Shieh, Jillian R. Haney, Sepideh Parhami, Judson Belmont, Minsoo Kim, Patricia Morán Losada, Zenab Khan, Justyna Mleczko, Yan Xia, Rujia Dai, Daifeng Wang, Yucheng Yang, Min Xu, Kenneth Fish, Patrick R. Hof, Jonathan Warrell, Dominic Fitzgerald, Kevin P. White, Andrew E. Jaffe, Mette A. Peters, Mark Gerstein, Chunyu Liu, Lilia M. Iakoucheva, Dalila Pinto, Daniel H. Geschwind, Allison E. Ashley‐Koch, Gregory E. Crawford, Melanie E. Garrett, Lingyun Song, Alexias Safi, Graham D. Johnson, Gregory A. Wray, Timothy E. Reddy, Fernando S. Goes, Peter P. Zandi, Julien Bryois, Andrew E. Jaffe, Amanda J. Price, Nikolay A. Ivanov, Leonardo Collado‐Torres, Thomas M. Hyde, Emily E. Burke, Joel E. Kleiman, Ran Tao, Joo Heon Shin, Schahram Akbarian, Kiran Girdhar, Yan Jiang, Marija Kundaković, Leanne Brown, Bibi Kassim, Royce Park, Jennifer Wiseman, Elizabeth Zharovsky, Rivka Jacobov, Olivia Devillers, Elie Flatow, Gabriel E. Hoffman, Barbara K. Lipska, David A. Lewis, Vahram Haroutunian, Chang-Gyu Hahn, Alexander W. Charney, Stella Dracheva, Alexey Kozlenkov, Judson Belmont, Diane M. Del Valle, Nancy Francoeur, Evi Hadjimichael, Dalila Pinto, Harm van Bakel, Panos Roussos, John F. Fullard, Jaroslav Bendl, Mads E. Hauberg, Lara M. Mangravite, Mette A. Peters, Yooree Chae, Junmin Peng, Mingming Niu, Xusheng Wang, Maree J. Webster, Thomas G. Beach, Chao Chen, Yi Jiang, Rujia Dai, Annie W. Shieh, Chunyu Liu, Kay Grennan, Yan Xia and 88 more - Science 2018 cited by 1,370

Authors: Isaac B. Hilton, Anthony D’Ippolito, Christopher M. Vockley, Pratiksha I. Thakore, Gregory E. Crawford, Timothy E. Reddy, Charles A. Gersbach - Nature Biotechnology 2015 cited by 1,876

Authors: Daifeng Wang, Shuang Liu, Jonathan Warrell, Hyejung Won, Xu Shi, Fábio C. P. Navarro, Declan Clarke, Mengting Gu, Prashant S. Emani, Yucheng Yang, Min Xu, Michael J. Gandal, Shaoke Lou, Jing Zhang, Jonathan J. Park, Chengfei Yan, Suhn K. Rhie, Kasidet Manakongtreecheep, Holly Zhou, Aparna Nathan, Mette A. Peters, Eugenio Mattei, Dominic Fitzgerald, Tonya M. Brunetti, Jill E. Moore, Yan Jiang, Kiran Girdhar, Gabriel E. Hoffman, Selim Kalaycı, Zeynep H. Gümüş, Gregory E. Crawford, Panos Roussos, Schahram Akbarian, Andrew E. Jaffe, Kevin P. White, Zhiping Weng, Nenad Šestan, Daniel H. Geschwind, James A. Knowles, Mark Gerstein, Allison E. Ashley‐Koch, Gregory E. Crawford, Melanie E. Garrett, Lingyun Song, Alexias Safi, Graham D. Johnson, Gregory A. Wray, Timothy E. Reddy, Fernando S. Goes, Peter P. Zandi, Julien Bryois, Andrew E. Jaffe, Amanda J. Price, Nikolay A. Ivanov, Leonardo Collado‐Torres, Thomas M. Hyde, Emily E. Burke, Joel E. Kleiman, Ran Tao, Joo Heon Shin, Schahram Akbarian, Kiran Girdhar, Yan Jiang, Marija Kundaković, Leanne Brown, Bibi Kassim, Royce Park, Jennifer Wiseman, Elizabeth Zharovsky, Rivka Jacobov, Olivia Devillers, Elie Flatow, Gabriel E. Hoffman, Barbara K. Lipska, David A. Lewis, Vahram Haroutunian, Chang-Gyu Hahn, Alexander W. Charney, Stella Dracheva, Alexey Kozlenkov, Judson Belmont, Diane M. Del Valle, Nancy Francoeur, Evi Hadjimichael, Dalila Pinto, Harm van Bakel, Panos Roussos, John F. Fullard, Jaroslav Bendl, Mads E. Hauberg, Lara M. Mangravite, Mette A. Peters, Yooree Chae, Junmin Peng, Mingming Niu, Xusheng Wang, Maree J. Webster, Thomas G. Beach, Chao Chen, Yi Jiang and 93 more - Science 2018 cited by 1,102

Authors: Stephen G. Landt, Georgi K. Marinov, Anshul Kundaje, Pouya Kheradpour, Florencia Pauli, Serafim Batzoglou, B Bernstein, Peter J. Bickel, James B. Brown, Philip Cayting, Yiwen Chen, Gilberto DeSalvo, Charles B. Epstein, Katherine Fisher-Aylor, Ghia Euskirchen, Mark Gerstein, Jason Gertz, Alexander J. Hartemink, Michael M. Hoffman, Vishwanath R. Iyer, Youngsook L. Jung, Subhradip Karmakar, Manolis Kellis, Peter V. Kharchenko, Qunhua Li, Tao Liu, X. Shirley Liu, Lijia Ma, Aleksandar Milosavljevic, R Myers, Peter J. Park, Michael J. Pazin, Marc D. Perry, Debasish Raha, Timothy E. Reddy, Joel Rozowsky, Noam Shoresh, Arend Sidow, Matthew Slattery, J Stamatoyannopoulos, Michael Tolstorukov, Kevin P. White, Simon Xi, Peggy Farnham, Jason D. Lieb, B Wold, M Snyder - Genome Research 2012 cited by 2,223

Authors: Pablo Pérez‐Piñera, D. Dewran Koçak, Christopher M. Vockley, Andrew F. Adler, Ami M. Kabadi, Lauren R. Polstein, Pratiksha I. Thakore, Katherine A. Glass, David G. Ousterout, Kam W. Leong, Farshid Guilak, Gregory E. Crawford, Timothy E. Reddy, Charles A. Gersbach - Nature Methods 2013 cited by 1,349

Authors: Pratiksha I. Thakore, Anthony D’Ippolito, Lingyun Song, Alexias Safi, Nishkala K. Shivakumar, Ami M. Kabadi, Timothy E. Reddy, Gregory E. Crawford, Charles A. Gersbach - Nature Methods 2015 cited by 1,045

Authors: Danny E. Miller, Arvis Sulovari, Tianyun Wang, Hailey Loucks, Kendra Hoekzema, Katherine M. Munson, Alexandra P. Lewis, Edith P. Almanza Fuerte, Catherine R. Paschal, Tom Walsh, Jenny Thies, James T. Bennett, Ian A. Glass, Katrina M. Dipple, Karynne Patterson, Emily Bonkowski, Zoe Nelson, Audrey Squire, Megan Sikes, Erika Beckman, Robin L. Bennett, Dawn Earl, Winston Lee, Rando Allikmets, Seth J. Perlman, Penny Chow, Anne Hing, Tara Wenger, Margaret P Adam, Angela Sun, Christina Lam, Irene J. Chang, Xue Zou, Stephanie Austin, Erin Huggins, Alexias Safi, Apoorva K. Iyengar, Timothy E. Reddy, William H. Majoros, Andrew S. Allen, Gregory E. Crawford, Priya S. Kishnani, Mary‐Claire King, Tim Cherry, Jessica X. Chong, Michael J. Bamshad, Deborah A. Nickerson, Heather C. Mefford, Dan Doherty, Evan E. Eichler - The American Journal of Human Genetics 2021 cited by 239

Authors: Mark Gerstein, Anshul Kundaje, Manoj Hariharan, Stephen G. Landt, Koon‐Kiu Yan, Chao Cheng, Xinmeng Jasmine Mu, Ekta Khurana, Joel Rozowsky, Roger P. Alexander, Renqiang Min, Pedro Alves, Alexej Abyzov, Nick Addleman, Nitin Bhardwaj, Alan P. Boyle, Philip Cayting, Alexandra Charos, David Ziyou Chen, Yong Cheng, Declan Clarke, Catharine Eastman, Ghia Euskirchen, Seth Frietze, Yao Fu, Jason Gertz, Fabian Grubert, Arif Harmanci, Preti Jain, Maya Kasowski, Phil Lacroute, Jing Leng, Jin Lian, Hannah Monahan, Henriette O’Geen, Zhengqing Ouyang, E. Christopher Partridge, Dorrelyn Patacsil, Florencia Pauli, Debasish Raha, Lucı́a Ramı́rez, Timothy E. Reddy, Brian D. Reed, Minyi Shi, Teri Slifer, Jing Wang, Linfeng Wu, Xinqiong Yang, Kevin Y. Yip, Gili Zilberman-Schapira, Serafim Batzoglou, Arend Sidow, Peggy Farnham, R Myers, Sherman M. Weissman, M Snyder - Nature 2012 cited by 1,561

Authors: Schahram Akbarian, Chunyu Liu, James A. Knowles, Flora M. Vaccarino, Peggy Farnham, Gregory E. Crawford, Andrew E. Jaffe, Dalila Pinto, Stella Dracheva, Daniel H. Geschwind, Jonathan Mill, Angus C. Nairn, Alexej Abyzov, Sirisha Pochareddy, Shyam Prabhakar, Sherman M. Weissman, Patrick F. Sullivan, Matthew W. State, Zhiping Weng, Mette A. Peters, Kevin P. White, Mark Gerstein, Anahita Amiri, Chris Armoskus, Allison E. Ashley‐Koch, Taejeong Bae, Andrea Beckel‐Mitchener, Benjamin P. Berman, Gerhard A. Coetzee, Gianfilippo Coppola, Nancy Francoeur, Menachem Fromer, Robert Gao, Kay Grennan, Jennifer Herstein, David H. Kavanagh, Nikolay A. Ivanov, Yan Jiang, Robert R. Kitchen, Alexey Kozlenkov, Marija Kundaković, Mingfeng Li, Zhen Li, Shuang Liu, Lara M. Mangravite, Eugenio Mattei, Eirene Markenscoff-Papadimitriou, Fábio C. P. Navarro, Nicole North, Larsson Omberg, David M. Panchision, Neelroop Parikshak, Jérémie Poschmann, Amanda J. Price, Michael Purcaro, Timothy E. Reddy, Panos Roussos, Shannon Schreiner, Soraya Scuderi, Robert Sebra, Mikihito Shibata, Annie W. Shieh, Mario Škarica, Wenjie Sun, Vivek Swarup, Amber Thomas, Junko Tsuji, Harm van Bakel, Daifeng Wang, Yongjun Wang, Kai Wang, Donna M. Werling, A. Jeremy Willsey, Heather Witt, Hyejung Won, Chloe C. Y. Wong, Gregory A. Wray, Emily Wu, Xuming Xu, Lijing Yao, Geetha Senthil, Thomas Lehner, Pamela Sklar, Nenad Šestan - Nature Neuroscience 2015 cited by 488

Authors: Tyler S. Klann, Joshua B. Black, Malathi Chellappan, Alexias Safi, Lingyun Song, Isaac B. Hilton, Gregory E. Crawford, Timothy E. Reddy, Charles A. Gersbach - Nature Biotechnology 2017 cited by 470

Authors: Sean R. McCutcheon, Adam M. Swartz, Michael C. Brown, Alejandro Barrera, Christian McRoberts Amador, Keith Siklenka, Lucas Humayun, Maria A. ter Weele, James Isaacs, Timothy E. Reddy, Andrew S. Allen, Smita K. Nair, Scott J. Antonia, Charles A. Gersbach - Nature Genetics 2023 cited by 78

Authors: Jason Gertz, Daniel Savic, Katherine E. Varley, E. Christopher Partridge, Alexias Safi, Preti Jain, Gregory M. Cooper, Timothy E. Reddy, Gregory E. Crawford, R Myers - Molecular Cell 2013 cited by 422

Authors: Riley J. Mangan, Fernando C. Alsina, Federica Mosti, Jesús Emiliano Sotelo-Fonseca, Daniel Snellings, Eric H. Au, Juliana Lott Carvalho, Laya Sathyan, Graham D. Johnson, Timothy E. Reddy, Debra L. Silver, Craig B. Lowe - Cell 2022 cited by 127

Authors: Writing group (ordered by contribution), J Engreitz, Heather A. Lawson, Harinder Singh, Lea M. Starita, Gary C. Hon, Hannah Carter, Nidhi Sahni, Timothy E. Reddy, Xihong Lin, Yun Li, Nikhil Munshi, Maria H. Chahrour, Alan P. Boyle, Benjamin C. Hitz, A Mortazavi, Mark Craven, Karen L. Mohlke, Luca Pinello, Ting Wang, Anshul Kundaje, Feng Yue, Sarah Cody, Nina Farrell, Michael I. Love, Lara A. Muffley, Michael J. Pazin, Fairlie Reese, Eric Van Buren, Working Group and Focus Group Co-Chairs (alphabetical by last name), Catalog, Kushal K. Dey, Characterization, Martin Kircher, Computational Analysis, Modeling, and Prediction, Jian Ma, Predrag Radivojac, Project Design, Brunilda Balliu, Mapping, Brian A. Williams, Networks, Danwei Huangfu, Standards and Pipelines, Cardiometabolic, Chong Y. Park, Thomas Quertermous, Cellular Programs and Networks, Jishnu Das, Coding Variants, Michael A. Calderwood, Douglas M. Fowler, Marc Vidal, CRISPR, Lucas Ferreira, Defining and Systematizing Function, Sean D. Mooney, Vikas Pejaver, Enumerating Variants, Jingjing Zhao, Evolution, Steven Gazal, Evan Koch, Steven K. Reilly, Shamil Sunyaev, Imaging, Anne E. Carpenter, Immune, Jason D. Buenrostro, Christina S. Leslie, Rachel E. Savage, Impact on Diverse Populations, Stefanija Giric, iPSC, Chongyuan Luo, Kathrin Plath, MPRA, Alejandro Barrera, Max Schubach, Noncoding Variants, Andreas R. Gschwind, Jill E. Moore, Neuro, Nadav Ahituv, Phenotypic Impact and Function, S. Stephen Yi, QTL/Statgen, Ingileif B. Hallgrímsdóttir, Kyle J. Gaulton, Saori Sakaue, Single Cell, Sina Booeshaghi, Eugenio Mattei, Surag Nair, Lior Pachter, Austin T. Wang, Characterization Awards (contact PI, MPIs (alphabetical by last name), other members (alphabetical by last name)), UM1HG011966, Jay Shendure, Vikram Agarwal and 570 more - Nature 2024 cited by 84

Authors: Katherine E. Varley, Jason Gertz, Kevin M. Bowling, Stephanie Parker, Timothy E. Reddy, Florencia Pauli, Marie K. Cross, Brian A. Williams, J Stamatoyannopoulos, Gregory E. Crawford, Devin Absher, B Wold, R Myers - Genome Research 2013 cited by 735

Authors: Matthew Gemberling, Keith Siklenka, Erica Rodriguez, Katherine R. Tonn Eisinger, Alejandro Barrera, Fang Liu, Ariel Kantor, Liqing Li, Valentina Cigliola, Mariah F. Hazlett, Courtney Williams, Luke C. Bartelt, Victoria J. Madigan, Josephine C. Bodle, Heather Daniels, Douglas Rouse, Isaac B. Hilton, Aravind Asokan, Maria Ciofani, Kenneth D. Poss, Timothy E. Reddy, Anne E. West, Charles A. Gersbach - Nature Methods 2021 cited by 138

Authors: Benxia Hu, Hyejung Won, Won Mah, Royce Park, Bibi Kassim, Keeley Spiess, Alexey Kozlenkov, Cheynna Crowley, Sirisha Pochareddy, Allison E. Ashley‐Koch, Gregory E. Crawford, Melanie E. Garrett, Lingyun Song, Alexias Safi, Graham D. Johnson, Gregory A. Wray, Timothy E. Reddy, Fernando S. Goes, Peter P. Zandi, Julien Bryois, Andrew E. Jaffe, Amanda J. Price, Nikolay A. Ivanov, Leonardo Collado‐Torres, Thomas M. Hyde, Emily E. Burke, Joel E. Kleiman, Ran Tao, Joo Heon Shin, Kiran Girdhar, Yan Jiang, Marija Kundaković, Leanne Brown, Jennifer Wiseman, Elizabeth Zharovsky, Rivka Jacobov, Olivia Devillers, Elie Flatow, Gabriel E. Hoffman, Judson Belmont, Diane M. Del Valle, Nancy Francoeur, Evi Hadjimichael, Dalila Pinto, Harm van Bakel, Panos Roussos, John F. Fullard, Jaroslav Bendl, Mads E. Hauberg, Alexander W. Charney, Vahram Haroutunian, Barbara K. Lipska, David A. Lewis, Chang-Gyu Hahn, Lara M. Mangravite, Mette A. Peters, Yooree Chae, Junmin Peng, Mingming Niu, Xusheng Wang, Maree J. Webster, Thomas G. Beach, Chao Chen, Yi Jiang, Rujia Dai, Yongjun Wang, Yan Xia, Annie W. Shieh, Chunyu Liu, Kay Grennan, Ramu Vadukapuram, Gina Giase, Dominic Fitzgerald, Lijun Cheng, Miguel Brown, Mimi Brown, Tonya M. Brunetti, Thomas Goodman, Majd Alsayed, Kevin P. White, Mohana Ray, Damon Polioudakis, Brie Wamsley, Jiani Yin, Luis de la Torre-Ubieta, Michael J. Gandal, Vivek Swarup, Stephan Sanders, Matthew W. State, Donna M. Werling, Joon‐Yong An, Brooke Sheppard, A. Jeremy Willsey, Amira Kefi, Eugenio Mattei, Michael Purcaro, Zhiping Weng, J. Russell Moore, Henry Pratt, Jack Huey and 56 more - Nature Communications 2021 cited by 107

Authors: David Yao, Josh Tycko, Jin Woo Oh, Lexi R. Bounds, Sager J. Gosai, Lazaros Lataniotis, Ava Mackay-Smith, Benjamin R. Doughty, Idan Gabdank, Henri Schmidt, Tania Guerrero-Altamirano, Keith Siklenka, Katherine Guo, Alexander D. White, Ingrid Youngworth, Kalina Andreeva, Xingjie Ren, Alejandro Barrera, Yunhai Luo, Galip Gürkan Yardımcı, Ryan Tewhey, Anshul Kundaje, William J. Greenleaf, Pardis C. Sabeti, Christina S. Leslie, Yuri Pritykin, Jill E. Moore, M Beer, Charles A. Gersbach, Timothy E. Reddy, Yin Shen, J Engreitz, Michael C. Bassik, Steven K. Reilly - Nature Methods 2024 cited by 50

Authors: Ian Dunham, Anshul Kundaje, Shelley Force Aldred, Patrick Collins, Carrie Davis, Francis Doyle, Charles B. Epstein, Seth Frietze, Jennifer Harrow, Rajinder Kaul, Jainab Khatun, Bryan R. Lajoie, Stephen G. Landt, Bumkyu Lee, Florencia Pauli, Kate R. Rosenbloom, Peter J. Sabo, Alexias Safi, Amartya Sanyal, Noam Shoresh, Jeremy M. Simon, Lingyun Song, Nathan D. Trinklein, Robert C. Altshuler, Ewan Birney, James B. Brown, Chao Cheng, Sarah Djebali, Xianjun Dong, Jason Ernst, Terrence S. Furey, Mark Gerstein, Belinda Giardine, Melissa C. Greven, Ross C. Hardison, Robert S. Harris, Javier Herrero, Michael M. Hoffman, Sowmya Iyer, Manolis Kellis, Pouya Kheradpour, Timo Lassmann, Qunhua Li, Xin-Ying Lin, Georgi K. Marinov, Angelika Merkel, A Mortazavi, Stephen C.J. Parker, Timothy E. Reddy, Joel Rozowsky, Felix Schlesinger, Robert E. Thurman, Jie Wang, Lucas D. Ward, Troy W. Whitfield, Steven P. Wilder, Wei-Sheng Wu, Hualin Simon Xi, Kevin Y. Yip, Jiali Zhuang, B Bernstein, Eric D. Green, Chris Gunter, M Snyder, Michael J. Pazin, Rebecca F. Lowdon, Laura A. L. Dillon, Leslie B. Adams, Caroline J. Kelly, Julia Zhang, Judith R. Wexler, Peter J. Good, Elise A. Feingold, Gregory E. Crawford, Job Dekker, Laura Elnitski, Peggy Farnham, Morgan C. Giddings, T Gingeras, Roderic Guigó, Timothy J. Hubbard, W. James Kent, Jason D. Lieb, Elliott H. Margulies, R Myers, J Stamatoyannopoulos, Scott A. Tenenbaum, Zhiping Weng, Kevin P. White, B Wold, Yanbao Yu, John A. Wrobel, Brian A. Risk, Harsha P. Gunawardena, Heather Kuiper, Christopher Maier, Ling Xie, Xian Chen, Tarjei S. Mikkelsen, Shawn Gillespie and 343 more - 2012 cited by 2,783

Authors: Julien Bryois, Melanie E. Garrett, Lingyun Song, Alexias Safi, Paola Giusti‐Rodríguez, Graham D. Johnson, Annie W. Shieh, Alfonso Buil, John F. Fullard, Panos Roussos, Pamela Sklar, Schahram Akbarian, Vahram Haroutunian, Craig A. Stockmeier, Gregory A. Wray, Kevin P. White, Chunyu Liu, Timothy E. Reddy, Allison E. Ashley‐Koch, Patrick F. Sullivan, Gregory E. Crawford - Nature Communications 2018 cited by 187

Authors: Joshua B. Black, Andrew F. Adler, Hong‐Gang Wang, Anthony D’Ippolito, Hunter Hutchinson, Timothy E. Reddy, Geoffrey S. Pitt, Kam W. Leong, Charles A. Gersbach - Cell stem cell 2016 cited by 220

Authors: Stefan Preković, Karianne Schuurman, Isabel Mayayo‐Peralta, Anna G. Manjón, Mark J. Buijs, Selçuk Yavuz, Max D. Wellenstein, Alejandro Barrera, Kim Monkhorst, Anne Huber, Ben Morris, Cor Lieftink, Theofilos Chalkiadakis, Ferhat Alkan, Joana Silva, Balázs Győrffy, Liesbeth Hoekman, Bram van den Broek, Hans Teunissen, Donna O. Debets, Tesa Severson, Jos Jonkers, Timothy E. Reddy, Karin E. de Visser, William J. Faller, Roderick L. Beijersbergen, Maarten Altelaar, Elzo de Wit, René H. Medema, Wilbert Zwart - Nature Communications 2021 cited by 81

Authors: Joshua B. Black, Sean R. McCutcheon, Shataakshi Dube, Alejandro Barrera, Tyler S. Klann, Grayson Rice, Shaunak Adkar, Scott H. Soderling, Timothy E. Reddy, Charles A. Gersbach - Cell Reports 2020 cited by 75

Authors: Timothy E. Reddy, Florencia Pauli, Rebekka O. Sprouse, Norma Neff, Kimberly M. Newberry, Michael J. Garabedian, R Myers - Genome Research 2009 cited by 577