Vishwanath R. Iyer
Active 1995–2024
- 47
- Papers
- 29,221
- Citations
- 44
- h-index
- 46
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology73.8%
- Medicine12.9%
- Computer Science3.9%
- Agricultural and Biological Sciences2.4%
- Immunology and Microbiology1.9%
- Neuroscience1.7%
- Other3.4%
Topics
- Gene expression and cancer classification8.6%
- Genomics and Chromatin Dynamics8.3%
- Bioinformatics and Genomic Networks6.6%
- Gene Regulatory Network Analysis3.7%
- RNA Research and Splicing3.3%
- Fungal and yeast genetics research3.2%
- Other66.3%
Coauthors
- Bum-Kyu Lee10
- Patrick O. Brown10
- Daechan Park5
- Gregory E. Crawford5
- Lingyun Song5
- Terrence S. Furey5
- Akshay Bhinge4
- Anna Battenhouse4
- Darin London4
- David Botstein4
- Ewan Birney4
- Alan P. Boyle3
- Damian Keefe3
- Haridha Shivram3
- Jason D. Lieb3
- Jonghwan Kim3
- Joseph L. DeRisi3
- Michael B. Eisen3
- Nathan C. Sheffield3
- Ryan M. McDaniell3
- Zheng Liu3
- Dari Shalon2
- Deval Lashkari2
- Douglas T. Ross2
All papers
- ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
Authors: Stephen G. Landt, Georgi K. Marinov, Anshul Kundaje, Pouya Kheradpour, Florencia Pauli, Serafim Batzoglou, B Bernstein, Peter J. Bickel, James B. Brown, Philip Cayting, Yiwen Chen, Gilberto DeSalvo, Charles B. Epstein, Katherine Fisher-Aylor, Ghia Euskirchen, Mark Gerstein, Jason Gertz, Alexander J. Hartemink, Michael M. Hoffman, Vishwanath R. Iyer, Youngsook L. Jung, Subhradip Karmakar, Manolis Kellis, Peter V. Kharchenko, Qunhua Li, Tao Liu, X. Shirley Liu, Lijia Ma, Aleksandar Milosavljevic, R Myers, Peter J. Park, Michael J. Pazin, Marc D. Perry, Debasish Raha, Timothy E. Reddy, Joel Rozowsky, Noam Shoresh, Arend Sidow, Matthew Slattery, J Stamatoyannopoulos, Michael Tolstorukov, Kevin P. White, Simon Xi, Peggy Farnham, Jason D. Lieb, B Wold, M Snyder - Genome Research 2012 cited by 2,223
- The accessible chromatin landscape of the human genome
Authors: Robert E. Thurman, Eric Rynes, Richard Humbert, Jeff Vierstra, Matthew T. Maurano, Eric Haugen, Nathan C. Sheffield, Andrew B. Stergachis, Hao Wang, Benjamin Vernot, Kavita S. Garg, Sam John, Richard Sandstrom, Daniel Bates, Lisa Boatman, Theresa K. Canfield, Morgan Diegel, Douglas Dunn, Abigail K. Ebersol, Tristan Frum, Erika Giste, Audra Johnson, Ericka M. Johnson, Tanya Kutyavin, Bryan R. Lajoie, Bum-Kyu Lee, Kristen Lee, Darin London, Dimitra M. Lotakis, Shane Neph, Fidencio Neri, Éric Nguyen, Hongzhu Qu, Alex Reynolds, Vaughn Roach, Alexias Safi, Minerva E. Sanchez, Amartya Sanyal, Anthony Shafer, Jeremy M. Simon, Lingyun Song, Shinny Vong, Molly Weaver, Yongqi Yan, Zhancheng Zhang, Zhuzhu Zhang, Boris Lenhard, Muneesh Tewari, Michael O. Dorschner, R. Scott Hansen, Patrick A. Navas, George Stamatoyannopoulos, Vishwanath R. Iyer, Jason D. Lieb, Shamil Sunyaev, Joshua M. Akey, Peter J. Sabo, Rajinder Kaul, Terrence S. Furey, Job Dekker, Gregory E. Crawford, J Stamatoyannopoulos - Nature 2012 cited by 2,935
- Comprehensive Identification of Cell Cycle–regulated Genes of the YeastSaccharomyces cerevisiaeby Microarray Hybridization
Authors: Paul T. Spellman, Gavin Sherlock, Michael Q. Zhang, Vishwanath R. Iyer, Kirk R. Anders, Michael B. Eisen, Patrick O. Brown, David Botstein, Bruce Futcher - Molecular Biology of the Cell 1998 cited by 4,799
- Stem cell and neurogenic gene-expression profiles link prostate basal cells to aggressive prostate cancer
Authors: Dingxiao Zhang, Daechan Park, Yi Zhong, Yue Lu, Kiera Rycaj, Shuai Gong, Xin Chen, Xin Liu, Hsueh‐Ping Chao, Pamela Whitney, Tammy Calhoun‐Davis, Yoko Takata, Jianjun Shen, Vishwanath R. Iyer, Dean G. Tang - Nature Communications 2016 cited by 240
- Dasatinib in Imatinib-Resistant Philadelphia Chromosome–Positive Leukemias
Authors: Moshe Talpaz, Neil P. Shah, Hagop M. Kantarjian, Nicholas J. Donato, John Nicoll, Ron Paquette, Jörge E. Cortes, Susan O’Brien, Claude Nicaise, Eric Bleickardt, M. Anne Blackwood-Chirchir, Vishwanath R. Iyer, Tai‐Tsang Chen, Fei Huang, Arthur P. DeCillis, Charles L. Sawyers - New England Journal of Medicine 2006 cited by 1,772
- Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale
Authors: Joseph L. DeRisi, Vishwanath R. Iyer, Patrick O. Brown - Science 1997 cited by 4,517
- Thermostable group II intron reverse transcriptase fusion proteins and their use in cDNA synthesis and next-generation RNA sequencing
Authors: Sabine Mohr, Eman Ghanem, Whitney Smith, Dennis A. Sheeter, Yidan Qin, Olga King, Damon Polioudakis, Vishwanath R. Iyer, Scott Hunicke‐Smith, Sajani Swamy, Scott Kuersten, Alan M. Lambowitz - RNA 2013 cited by 224
- Dendritic cell fate is determined by BCL11A
Authors: Gregory C. Ippolito, Joseph D. Dekker, Yui-Hsi Wang, Bum-Kyu Lee, Arthur L. Shaffer, Jian Lin, Jason K Wall, Baeck-Seung Lee, Louis M. Staudt, Yong‐Jun Liu, Vishwanath R. Iyer, Haley O. Tucker - National Academy of Sciences, Proceedings of the National Academy of Sciences 2014 cited by 133
- Global Transcriptional Profiling Reveals Distinct Functions of Thymic Stromal Subsets and Age-Related Changes during Thymic Involution
Authors: Sanghee Ki, Daechan Park, Hilary J. Selden, Jun Seita, Haewon Chung, Jonghwan Kim, Vishwanath R. Iyer, Lauren I. R. Ehrlich - Cell Reports 2014 cited by 127
- The Transcriptional Program in the Response of Human Fibroblasts to Serum
Authors: Vishwanath R. Iyer, Michael B. Eisen, Douglas T. Ross, Greg Schuler, Troy Moore, Jeffrey C. F. Lee, Jeffrey M. Trent, Louis M. Staudt, James R. Hudson, Mark S. Boguski, Deval Lashkari, Dari Shalon, David Botstein, Patrick O. Brown - Science 1999 cited by 1,983
- Genetic reconstruction of a functional transcriptional regulatory network
Authors: Zhanzhi Hu, Patrick J. Killion, Vishwanath R. Iyer - Nature Genetics 2007 cited by 432
- Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells
Authors: Bum-Kyu Lee, Akshay Bhinge, Anna Battenhouse, Ryan M. McDaniell, Zheng Liu, Lingyun Song, Yunyun Ni, Ewan Birney, Jason D. Lieb, Terrence S. Furey, Gregory E. Crawford, Vishwanath R. Iyer - Genome Research 2011 cited by 149
- Systematic variation in gene expression patterns in human cancer cell lines
Authors: Douglas T. Ross, Uwe Scherf, Michael B. Eisen, Charles M. Perou, Christian A. Rees, Paul T. Spellman, Vishwanath R. Iyer, Stefanie S. Jeffrey, Matt van de Rijn, Mark Waltham, Alexander Pergamenschikov, Jeffrey C. F. Lee, Deval Lashkari, Dari Shalon, Timothy G. Myers, John N. Weinstein, David Botstein, Patrick O. Brown - Nature Genetics 2000 cited by 2,095
- Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
Authors: Lingyun Song, Zhancheng Zhang, Linda L. Grasfeder, Alan P. Boyle, Paul G. Giresi, Bum-Kyu Lee, Nathan C. Sheffield, Stefan Gräf, Mikael Huss, Damian Keefe, Zheng Liu, Darin London, Ryan M. McDaniell, Yoichiro Shibata, Kimberly A. Showers, Jeremy M. Simon, Teresa R. Vales, Tianyuan Wang, Deborah R. Winter, Zhuzhu Zhang, Neil D. Clarke, Ewan Birney, Vishwanath R. Iyer, Gregory E. Crawford, Jason D. Lieb, Terrence S. Furey - Genome Research 2011 cited by 526
- Global Identification of Myc Target Genes Reveals Its Direct Role in Mitochondrial Biogenesis and Its E-Box Usage In Vivo
Authors: Jonghwan Kim, Ji Hoon Lee, Vishwanath R. Iyer - PLoS ONE 2008 cited by 222
- Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF
Authors: Vishwanath R. Iyer, Christine E. Horak, Charles Scafe, David Botstein, M Snyder, Patrick O. Brown - Nature 2001 cited by 1,096
- High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
Authors: Alan P. Boyle, Lingyun Song, Bum-Kyu Lee, Darin London, Damian Keefe, Ewan Birney, Vishwanath R. Iyer, Gregory E. Crawford, Terrence S. Furey - Genome Research 2010 cited by 333
- Synthetic evolutionary origin of a proofreading reverse transcriptase
Authors: Jared W. Ellefson, Jimmy Gollihar, Raghav Shroff, Haridha Shivram, Vishwanath R. Iyer, Andrew D. Ellington - Science 2016 cited by 139
- Simultaneous mapping of transcript ends at single-nucleotide resolution and identification of widespread promoter-associated non-coding RNA governed by TATA elements
Authors: Daechan Park, Adam R. Morris, Anna Battenhouse, Vishwanath R. Iyer - Nucleic Acids Research 2014 cited by 118
- Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection
Authors: Yoichiro Shibata, Nathan C. Sheffield, Olivier Fédrigo, Courtney C. Babbitt, Matthew Wortham, Alok K. Tewari, Darin London, Lingyun Song, Bum-Kyu Lee, Vishwanath R. Iyer, Stephen C.J. Parker, Elliott H. Margulies, Gregory A. Wray, Terrence S. Furey, Gregory E. Crawford - PLoS Genetics 2012 cited by 143
- Whole-genome expression analysis of snf/swi mutants of Saccharomyces cerevisiae
Authors: Priya Sudarsanam, Vishwanath R. Iyer, Patrick O. Brown, Fred Winston - National Academy of Sciences, Proceedings of the National Academy of Sciences 2000 cited by 392
- Wide-ranging functions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis
Authors: Bum-Kyu Lee, Akshay Bhinge, Vishwanath R. Iyer - Nucleic Acids Research 2011 cited by 155
- CARM1 promotes adipocyte differentiation by coactivating PPARγ
Authors: Neelu Yadav, Donghang Cheng, Stéphane Richard, Mélanie Morel‐Rouhier, Vishwanath R. Iyer, C. Marcelo Aldaz, Mark T. Bedford - EMBO Reports 2008 cited by 130
- Genome-Wide Analysis of the Biology of Stress Responses through Heat Shock Transcription Factor
Authors: Ji-Sook Hahn, Zhanzhi Hu, Dennis J. Thiele, Vishwanath R. Iyer - Molecular and Cellular Biology 2004 cited by 453
