Peggy Farnham

Active 1980–2024

117
Papers
55,083
Citations
92
h-index
117
i10-index

Citations

Citations per year for Peggy Farnham1948: 1 citations1972: 1 citations1981: 11 citations1982: 12 citations1983: 6 citations1984: 8 citations1985: 15 citations1986: 32 citations1987: 17 citations1988: 26 citations1989: 17 citations1990: 22 citations1991: 30 citations1992: 33 citations1993: 108 citations1994: 136 citations1995: 144 citations1996: 143 citations1997: 103 citations1998: 96 citations1999: 98 citations2000: 94 citations2001: 129 citations2002: 176 citations2003: 211 citations2004: 197 citations2005: 221 citations2006: 261 citations2007: 267 citations2008: 303 citations2009: 321 citations2010: 390 citations2011: 421 citations2012: 499 citations2013: 1,176 citations2014: 1,252 citations2015: 1,278 citations2016: 1,057 citations2017: 1,006 citations2018: 956 citations2019: 2,162 citations2020: 2,068 citations2021: 1,743 citations2022: 1,267 citations2023: 871 citations2024: 1,255 citations2025: 598 citations2026: 34 citations1949–1971: no citations, so these years are not shown1973–1980: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 9,563 citing papers, 32.2% of this breakdownChina: 2,994 citing papers, 10.1% of this breakdownUnited Kingdom: 2,086 citing papers, 7% of this breakdownGermany: 1,632 citing papers, 5.5% of this breakdownCanada: 1,115 citing papers, 3.8% of this breakdownAustralia: 882 citing papers, 3% of this breakdownFrance: 881 citing papers, 3% of this breakdownItaly: 810 citing papers, 2.7% of this breakdownJapan: 774 citing papers, 2.6% of this breakdownNetherlands: 751 citing papers, 2.5% of this breakdownSpain: 749 citing papers, 2.5% of this breakdownSwitzerland: 557 citing papers, 1.9% of this breakdown
0%32.2%Other 23.2%

Fields

  • Biochemistry, Genetics and Molecular Biology74.6%
  • Medicine14.1%
  • Immunology and Microbiology4%
  • Agricultural and Biological Sciences2.6%
  • Neuroscience2.5%
  • Computer Science0.6%
  • Other1.6%

Topics

  • Genomics and Chromatin Dynamics8.3%
  • Epigenetics and DNA Methylation6.7%
  • RNA modifications and cancer6.3%
  • RNA Research and Splicing5.4%
  • Cancer-related molecular mechanisms research5.3%
  • RNA and protein synthesis mechanisms3%
  • Other65%

Coauthors

All papers

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  1. An integrated encyclopedia of DNA elements in the human genome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Megan Fastuca, Kata Fejes-Toth, Assaf Gordon, Sonali Jha, Jonathan Preall, Kimberly Presaud, Lei-Hoon See, Huaien Wang, Gregory J. Hannon, Francis Doyle, Scott A. Tenenbaum, Charles B. Epstein, Noam Shoresh, B Bernstein, Tarjei S. Mikkelsen, Alon Goren, Oren Ram, Xiaolan Zhang, Li Wang, Robbyn Issner, Michael J. Coyne, Timothy Durham, Manching Ku, Thanh Truong, Seth Frietze, Peggy Farnham, Heather Witt, Jennifer Harrow, Timothy J. Hubbard, Felix Kokocinski, Bronwen Aken, Daniel Barrell, Gemma Barson, Andrew Berry, Alexandra Bignell, Veronika Boychenko, Claire Davidson, Gloria Despacio-Reyes, Adam Frankish, James Gilbert, José M. González, Ed Griffiths, Toby Hunt, Mike Kay, Jane Loveland, Deepa Manthravadi, Jonathan Mudge, Gaurab Mukherjee, Gary Saunders, Stephen Searle, Catherine Snow, Charlie Steward, Electra Tapanari, Laurens Wilming, Amonida Zadissa, Rajinder Kaul, Jainab Khatun, Morgan C. Giddings, John Wrobel, Brian A. Risk, Bryan R. Lajoie, Amartya Sanyal, Job Dekker, Gaurav Jain, Stephen G. Landt, M Snyder, Nick Addleman, Keith Bettinger, Alan P. Boyle, Philip Cayting - Nature 2012 cited by 19,606

  2. ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Peter J. Park, Michael J. Pazin, Marc D. Perry, Debasish Raha, Timothy E. Reddy, Joel Rozowsky, Noam Shoresh, Arend Sidow, Matthew Slattery, J Stamatoyannopoulos, Michael Tolstorukov, Kevin P. White, Simon Xi, Peggy Farnham, Jason D. Lieb, B Wold, M Snyder - Genome Research 2012 cited by 2,223

  3. Functional Demarcation of Active and Silent Chromatin Domains in Human HOX Loci by Noncoding RNAs

    Authors: , , , , , , , , , , - Cell 2007 cited by 4,299

  4. The NIH Roadmap Epigenomics Mapping Consortium

    Authors: , , , , , , , , , , , , , , - Nature Biotechnology 2010 cited by 2,046

  5. Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Gregory E. Crawford, Pat Sullivan, Wesley K. Thompson, Preben Bo Mortensen, Esben Agerbo, Marianne Giørtz Pedersen, Carsten Bøcker Pedersen, Ole Mors, Anders D. Børglum, Merete Nordentoft, David M. Hougaard, Jonas Bybjerg‐Grauholm, Marie Bækvad‐Hansen, Alicia R. Martin, Ashley Dumont, Christine Stevens, Claire Churchhouse, Daniel P. Howrigan, Duncan S. Palmer, Elise Robinson, Kyle Satterstrom, Felecia Cerrato, Hailiang Huang, Jacqueline I. Goldstein, Jennifer L. Moran, Joanna Martin Julian, M. Alonge Kimberly, C. Seed Patrick, Patrick Turley, Raymond K. Walters, Rich Belliveau, Stephan Ripke, Timothy Poterba, Mark J. Daly, Benjamin M. Neale, Menachem Fromer, Panos Roussos, Jessica Johnson, Hardik Shah, Milind Mahajan, Eric E. Schadt, Vahram Haroutunian, Douglas M. Ruderfer, Joseph D. Buxbaum, Solveig K. Sieberts, Kristen K. Dang, Ben Logsdon, Lara M. Mangravite, Mette A. Peters, Raquel E. Gur, Chang-Gyu Hahn, Bernie Devlin, Lambertus Klei, David A. Lewis, Barbara K. Lipska, Keisuke Hirai, Hiroyoshi Toyoshiba, Enrico Domenici - Science 2018 cited by 1,177

  6. Architecture of the human regulatory network derived from ENCODE data

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Phil Lacroute, Jing Leng, Jin Lian, Hannah Monahan, Henriette O’Geen, Zhengqing Ouyang, E. Christopher Partridge, Dorrelyn Patacsil, Florencia Pauli, Debasish Raha, Lucı́a Ramı́rez, Timothy E. Reddy, Brian D. Reed, Minyi Shi, Teri Slifer, Jing Wang, Linfeng Wu, Xinqiong Yang, Kevin Y. Yip, Gili Zilberman-Schapira, Serafim Batzoglou, Arend Sidow, Peggy Farnham, R Myers, Sherman M. Weissman, M Snyder - Nature 2012 cited by 1,561

  7. The PsychENCODE project

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Nancy Francoeur, Menachem Fromer, Robert Gao, Kay Grennan, Jennifer Herstein, David H. Kavanagh, Nikolay A. Ivanov, Yan Jiang, Robert R. Kitchen, Alexey Kozlenkov, Marija Kundaković, Mingfeng Li, Zhen Li, Shuang Liu, Lara M. Mangravite, Eugenio Mattei, Eirene Markenscoff-Papadimitriou, Fábio C. P. Navarro, Nicole North, Larsson Omberg, David M. Panchision, Neelroop Parikshak, Jérémie Poschmann, Amanda J. Price, Michael Purcaro, Timothy E. Reddy, Panos Roussos, Shannon Schreiner, Soraya Scuderi, Robert Sebra, Mikihito Shibata, Annie W. Shieh, Mario Škarica, Wenjie Sun, Vivek Swarup, Amber Thomas, Junko Tsuji, Harm van Bakel, Daifeng Wang, Yongjun Wang, Kai Wang, Donna M. Werling, A. Jeremy Willsey, Heather Witt, Hyejung Won, Chloe C. Y. Wong, Gregory A. Wray, Emily Wu, Xuming Xu, Lijing Yao, Geetha Senthil, Thomas Lehner, Pamela Sklar, Nenad Šestan - Nature Neuroscience 2015 cited by 488

  8. dCas9-based epigenome editing suggests acquisition of histone methylation is not sufficient for target gene repression

    Authors: , , , , , , , , - Nucleic Acids Research 2017 cited by 256

  9. Transcriptome and epigenome landscape of human cortical development modeled in organoids

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Emily E. Burke, Adrian Camarena, Becky C. Carlyle, Yooree Chae, Alexander W. Charney, Chao Chen, Lijun Cheng, Adriana Cherskov, Jinmyung Choi, Declan Clarke, Leonardo Collado‐Torres, Rujia Dai, Luis de la Torre-Ubieta, Diane M. Del Valle, Olivia Devillers, Stella Dracheva, Prashant S. Emani, Oleg V. Evgrafov, Peggy Farnham, Dominic Fitzgerald, Elie Flatow, Nancy Francoeur, John F. Fullard, Michael J. Gandal, Tianliuyun Gao, Melanie E. Garrett, Daniel H. Geschwind, Gina Giase, Kiran Girdhar, Paola Giusti‐Rodríguez, Fernando S. Goes, Thomas Goodman, Kay Grennan, Mengting Gu, Gamze Gürsoy, Evi Hadjimichael, Chang-Gyu Hahn, Vahram Haroutunian, Mads E. Hauberg, Gabriel E. Hoffman, Jack Huey, Thomas M. Hyde, Nikolay A. Ivanov, Rivka Jacobov, Andrew E. Jaffe, Yan Jiang, Yi Jiang, Graham D. Johnson, Bibi Kassim, Amira Kefi, Yunjung Kim, Robert R. Kitchen, Joel E. Kleiman, James A. Knowles, Alexey Kozlenkov, Mingfeng Li, Zhen Li, Barbara K. Lipska, Chunyu Liu, Shuang Liu, Lara M. Mangravite, Jessica Mariani, Eugenio Mattei, Daniel J. Miller, J. Russell Moore, Angus C. Nairn, Fábio C. P. Navarro, Royce Park, Mette A. Peters, Dalila Pinto and 47 more - Science 2018 cited by 315

  10. Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability

    Authors: , , , , , , , , , , , , - Genome biology 2022 cited by 120

  11. Making sense of GWAS: using epigenomics and genome engineering to understand the functional relevance of SNPs in non-coding regions of the human genome

    Authors: , - Epigenetics & Chromatin 2015 cited by 379

  12. Ezh2-dCas9 and KRAB-dCas9 enable engineering of epigenetic memory in a context-dependent manner

    Authors: , , , , , , , , - Epigenetics & Chromatin 2019 cited by 176

  13. Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Joseph R. Ecker, Wei Li, Peggy Farnham, Robert A. Waterland, Alexander Meissner, Marco A. Marra, Martin Hirst, Aleksandar Milosavljevic, J Costello - Nature Biotechnology 2010 cited by 739

  14. KAP1 Protein: An Enigmatic Master Regulator of the Genome

    Authors: , - Journal of Biological Chemistry 2011 cited by 383

  15. An integrated encyclopedia of DNA elements in the human genome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Terrence S. Furey, Mark Gerstein, Belinda Giardine, Melissa C. Greven, Ross C. Hardison, Robert S. Harris, Javier Herrero, Michael M. Hoffman, Sowmya Iyer, Manolis Kellis, Pouya Kheradpour, Timo Lassmann, Qunhua Li, Xin-Ying Lin, Georgi K. Marinov, Angelika Merkel, A Mortazavi, Stephen C.J. Parker, Timothy E. Reddy, Joel Rozowsky, Felix Schlesinger, Robert E. Thurman, Jie Wang, Lucas D. Ward, Troy W. Whitfield, Steven P. Wilder, Wei-Sheng Wu, Hualin Simon Xi, Kevin Y. Yip, Jiali Zhuang, B Bernstein, Eric D. Green, Chris Gunter, M Snyder, Michael J. Pazin, Rebecca F. Lowdon, Laura A. L. Dillon, Leslie B. Adams, Caroline J. Kelly, Julia Zhang, Judith R. Wexler, Peter J. Good, Elise A. Feingold, Gregory E. Crawford, Job Dekker, Laura Elnitski, Peggy Farnham, Morgan C. Giddings, T Gingeras, Roderic Guigó, Timothy J. Hubbard, W. James Kent, Jason D. Lieb, Elliott H. Margulies, R Myers, J Stamatoyannopoulos, Scott A. Tenenbaum, Zhiping Weng, Kevin P. White, B Wold, Yanbao Yu, John A. Wrobel, Brian A. Risk, Harsha P. Gunawardena, Heather Kuiper, Christopher Maier, Ling Xie, Xian Chen, Tarjei S. Mikkelsen, Shawn Gillespie and 343 more - 2012 cited by 2,783

  16. A high-resolution 3D epigenomic map reveals insights into the creation of the prostate cancer transcriptome

    Authors: , , , , , , - Nature Communications 2019 cited by 144

  17. T-bet Regulates the Terminal Maturation and Homeostasis of NK and Vα14i NKT Cells

    Authors: , , , , , , , - Immunity 2004 cited by 706

  18. Defining functional DNA elements in the human genome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , - National Academy of Sciences, Proceedings of the National Academy of Sciences 2014 cited by 749

  19. DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , - Nature Genetics 2013 cited by 250

  20. Inferring regulatory element landscapes and transcription factor networks from cancer methylomes

    Authors: , , , , - Genome Biology 2015 cited by 219

  21. Using ChIP-Seq Technology to Generate High-Resolution Profiles of Histone Modifications

    Authors: , , - Methods in molecular biology 2011 cited by 174

  22. Characterization of the ZFX family of transcription factors that bind downstream of the start site of CpG island promoters

    Authors: , , , , - Nucleic Acids Research 2020 cited by 51

  23. The Human Epigenome Browser at Washington University

    Authors: , , , , , , , , , , , , , , , , , - Nature Methods 2011 cited by 327

  24. Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Baoxue Zhang, J Costello, Ting Wang - Genome Research 2013 cited by 203