David Haussler
Active 1974–2026
- 339
- Papers
- 140,004
- Citations
- 156
- h-index
- 296
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology53.5%
- Computer Science18.6%
- Medicine13%
- Agricultural and Biological Sciences4.3%
- Immunology and Microbiology2%
- Neuroscience1.9%
- Other6.7%
Topics
- Genomics and Phylogenetic Studies5.1%
- RNA and protein synthesis mechanisms3.1%
- RNA modifications and cancer3%
- Genomics and Chromatin Dynamics2.9%
- RNA Research and Splicing2.6%
- Epigenetics and DNA Methylation2.5%
- Other80.8%
Coauthors
- W. James Kent59
- Mark Diekhans54
- Brian J. Raney38
- Angie S. Hinrichs35
- Hiram Clawson35
- Robert M. Kuhn35
- Sofie R. Salama35
- Benedict Paten34
- Kate R. Rosenbloom32
- Ann S. Zweig31
- Donna Karolchik29
- Galt P. Barber26
- Mircea Teodorescu23
- Maximilian Haeussler21
- Andrzej Ehrenfeucht17
- Brian T. Lee16
- Glenn Hickey16
- Joel Armstrong16
- Robert Baertsch16
- Jingchun Zhu15
- Matthew L. Speir15
- Rachel A. Harte15
- Webb Miller15
- Brooke L. Rhead14
All papers
- Visualizing and interpreting cancer genomics data via the Xena platform
Authors: Mary J. Goldman, Brian Craft, Mim Hastie, Kristupas Repečka, Fran McDade, Akhil Kamath, Ayan Banerjee, Yunhai Luo, Dave Rogers, Angela N. Brooks, Jingchun Zhu, David Haussler - Nature Biotechnology 2020 cited by 4,767
- Integrative analysis of 111 reference human epigenomes Open
Authors: Roadmap Epigenomics Consortium, Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi Moussavi, Pouya Kheradpour, ZhiZhuo Zhang, Jianrong Wang, Michael J. Ziller, Viren Amin, John W. Whitaker, Matthew D. Schultz, Lucas D. Ward, Abhishek Sarkar, Gerald T. Quon, Richard S. Sandstrom, Matthew L. Eaton, Yi-Chieh Wu, Andreas R. Pfenning, Xinchen Wang, Melina Claussnitzer, Yaping Liu, Cristian Coarfa, R. Alan Harris, Noam Shoresh, Charles B. Epstein, Elizabeta Gjoneska, Danny Leung, Wei Xie, R. David Hawkins, Ryan Lister, Chibo Hong, Philippe Gascard, Andrew J. Mungall, Richard A. Moore, Eric Chuah, Angela Tam, Theresa K. Canfield, R. Scott Hansen, Rajinder Kaul, Peter J. Sabo, Mukul S. Bansal, Annaick Carles, Jesse R. Dixon, Kyle Kai-How Farh, Soheil Feizi, Rosa Karlic, Ah-Ram Kim, Ashwinikumar Kulkarni, Daofeng Li, Rebecca F. Lowdon, GiNell Elliott, Tim R. Mercer, Shane J. Neph, Vitor Onuchic, Paz Polak, Nisha Rajagopal, Pradipta Ray, Richard C. Sallari, Kyle T. Siebenthall, Nicholas A. Sinnott-Armstrong, Michael Stevens, Robert E. Thurman, Jie Wu, Bo Zhang, Xin Zhou, Arthur E. Beaudet, Laurie A. Boyer, Philip L. De Jager, Peggy J. Farnham, Susan J. Fisher, David Haussler, Steven J. M. Jones, Wei Li, Marco A. Marra, Michael T. McManus, Shamil R. Sunyaev, James A. Thomson, Thea D. Tlsty, Li-Huei Tsai, Wei Wang, Robert A. Waterland, Michael Q. Zhang, Lisa H. Chadwick, Bradley E. Bernstein, Joseph F. Costello, Joseph R. Ecker, Martin Hirst, Alexander Meissner, Aleksandar Milosavljevic, Bing Ren, John A. Stamatoyannopoulos, Ting Wang, Manolis Kellis - Nature, Nat. 2015 cited by 7,201
- The Somatic Genomic Landscape of Glioblastoma
Authors: Cameron Brennan, Roel G.W. Verhaak, Aaron McKenna, Benito Campos, Houtan Noushmehr, Sofie R. Salama, Siyuan Zheng, Debyani Chakravarty, Zack Sanborn, Samuel Berman, Rameen Beroukhim, Brady Bernard, Chang-Jiun Wu, Giannicola Genovese, Ilya Shmulevich, Jill S. Barnholtz‐Sloan, Lihua Zou, Rahulsimham Vegesna, Sachet A. Shukla, Giovanni Ciriello, W. K. Alfred Yung, Wei Zhang, Carrie Sougnez, Tom Mikkelsen, Kenneth Aldape, Darell D. Bigner, Erwin G. Van Meir, Michael D. Prados, Andrew E. Sloan, Keith L. Black, Jennifer Eschbacher, Gaetano Finocchiaro, William A. Friedman, David W. Andrews, Abhijit Guha, Mary Iacocca, Brian Patrick O’Neill, Greg Foltz, Jerome Myers, Daniel J. Weisenberger, Robert Penny, Raju Kucherlapati, Charles M. Perou, D. Neil Hayes, Richard A. Gibbs, Marco A. Marra, Gordon B. Mills, Eric S. Lander, Paul T. Spellman, Richard K. Wilson, Chris Sander, John N. Weinstein, Matthew Meyerson, Stacey Gabriel, Peter W. Laird, David Haussler, Gad Getz, Lynda Chin, Christopher C. Benz, Jill S. Barnholtz‐Sloan, Wendi Barrett, Quinn T. Ostrom, Yingli Wolinsky, Keith L. Black, Bikash Bose, Paul T. Boulos, Madgy Boulos, Jenn Brown, Christine Czerinski, Matthew Eppley, Mary Iacocca, Thelma Kempista, Teresa Kitko, Yakov Koyfman, Brenda Rabeno, Pawan Rastogi, Michael C. Sugarman, Patricia Swanson, Kennedy Yalamanchii, Ilana P. Otey, Yingchun Spring Liu, Yonghong Xiao, J. Todd Auman, Peng‐Chieh Chen, Angela Hadjipanayis, Eunjung Lee, Semin Lee, Peter J. Park, Jonathan G. Seidman, Lixing Yang, Raju Kucherlapati, Steven N. Kalkanis, Tom Mikkelsen, Laila Poisson, Aditya Raghunathan, Lisa Scarpace, Brady Bernard, Ryan Bressler, Andrea Eakin, Lisa Iype and 200 more - Cell 2013 cited by 5,227
- Using native and syntenically mapped cDNA alignments to improve de novo gene finding
Authors: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler - Bioinformatics, Bioinform. 2008 cited by 2,599
- Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
Authors: Adam Siepel, Gill Bejerano, Jakob Skou Pedersen, Angie S. Hinrichs, Minmei Hou, Kate R. Rosenbloom, Hiram Clawson, John Spieth, LaDeana W. Hillier, Stephen Richards, George M. Weinstock, Richard K. Wilson, Richard A. Gibbs, W. James Kent, Webb Miller, David Haussler - Genome Research 2005 cited by 4,310
- GENCODE: The reference human genome annotation for The ENCODE Project
Authors: Jennifer Harrow, Adam Frankish, José M. González, Electra Tapanari, Mark Diekhans, Felix Kokocinski, Bronwen Aken, Daniel Barrell, Amonida Zadissa, Stephen M. J. Searle, If Barnes, Alexandra Bignell, Veronika Boychenko, Toby Hunt, Mike Kay, Gaurab Mukherjee, Jeena Rajan, Gloria Despacio-Reyes, Gary Saunders, Charles A. Steward, Rachel Harte, Michael Lin, Cédric Howald, Andrea Tanzer, Thomas Derrien, Jacqueline Chrast, Nathalie Walters, Suganthi Balasubramanian, Baikang Pei, Michael L. Tress, José Manuel Rodrı́guez, Iakes Ezkurdia, Jeltje van Baren, Michael R. Brent, David Haussler, Manolis Kellis, Alfonso Valencia, Alexandre Reymond, Mark Gerstein, Roderic Guigó, Tim Hubbard - Genome Research 2012 cited by 5,035
- The UCSC Genome Browser Database: update 2006
Authors: Angela S. Hinrichs, Donna Karolchik, Robert Baertsch, Galt P. Barber, Gill Bejerano, Hiram Clawson, Mark Diekhans, Terrence S. Furey, Rachel A. Harte, Fan Hsu, Jennifer Hillman-Jackson, Robert M. Kuhn, Jakob Skou Pedersen, Andy Pohl, Brian J. Raney, Kate R. Rosenbloom, Adam C. Siepel, Kayla E. Smith, Charles W. Sugnet, A. Sultan-Qurraie, Daryl J. Thomas, Heather Trumbower, Ryan J. Weber, M. Weirauch, Ann S. Zweig, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2005 cited by 1,799
- The UCSC Genome Browser database: 2023 update
Authors: Luis R. Nassar, Galt P. Barber, Anna Benet-Pagès, Jonathan Casper, Hiram Clawson, Mark Diekhans, Clayton M. Fischer, Jairo Navarro Gonzalez, Angie S. Hinrichs, Brian T. Lee, Christopher M. Lee, Pranav Muthuraman, Beagan Nguy, Tiana Pereira, Parisa Nejad, Gerardo Perez, Brian J. Raney, Daniel Schmelter, Matthew L. Speir, Brittney D. Wick, Ann S. Zweig, David Haussler, Robert M. Kuhn, Maximilian Haeussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2022 cited by 668
- Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma
Authors: Michele Ceccarelli, Floris P Barthel, Tathiane M. Malta, Thaís S. Sabedot, Sofie R. Salama, Bradley A. Murray, Olena Morozova, Yulia Newton, Amie Radenbaugh, Stefano Maria Pagnotta, Samreen Anjum, Jiguang Wang, Ganiraju C. Manyam, Pietro Zoppoli, Shiyun Ling, Arjun A. Rao, Mia Grifford, Andrew D. Cherniack, Hailei Zhang, Laila Poisson, Carlos Gilberto Carlotti, Daniela Pretti da Cunha Tirapelli, Arvind Rao, Tom Mikkelsen, Ching C. Lau, W. K. Alfred Yung, Raúl Rabadán, Jason T. Huse, Daniel J. Brat, Norman L. Lehman, Jill S. Barnholtz‐Sloan, Siyuan Zheng, Kenneth R. Hess, Ganesh Rao, Matthew Meyerson, Rameen Beroukhim, Lee Cooper, Rehan Akbani, Margaret Wrensch, David Haussler, Kenneth D. Aldape, Peter W. Laird, David H. Gutmann, Houtan Noushmehr, Antonio Iavarone, Roel G.W. Verhaak, Samreen Anjum, Harindra Arachchi, J. Todd Auman, Miruna Balasundaram, Saianand Balu, Gene H. Barnett, Stephen Baylin, Sue Bell, Christopher C. Benz, Natalie Bir, Keith L. Black, Tom Bodenheimer, Lori Boice, Moiz S. Bootwalla, Jay Bowen, Christopher A. Bristow, Yaron S.N. Butterfield, Qingrong Chen, Lynda Chin, Juok Cho, Eric Chuah, Sudha Chudamani, Simon G. Coetzee, Mark L. Cohen, Howard Colman, Marta Couce, Fulvio D’Angelo, Tanja M. Davidsen, Amy Davis, John A. Demchok, Karen Devine, Li Ding, Rebecca Duell, J. Bradley Elder, Jennifer Eschbacher, Ashley Fehrenbach, Martin L. Ferguson, Scott Frazer, Gregory N. Fuller, Jordonna Fulop, Stacey Gabriel, Luciano Garofano, Julie M. Gastier-Foster, Nils Gehlenborg, Mark Gerken, Gad Getz, Caterina Giannini, William J. Gibson, Angela Hadjipanayis, D. Neil Hayes, David I. Heiman, Beth Hermes, Joe Hilty, Katherine A. Hoadley and 108 more - Cell 2016 cited by 2,375
- The Human Pangenome Project: a global resource to map genomic diversity
Authors: Ting Wang, Lucinda Antonacci-Fulton, Kerstin Howe, Heather A. Lawson, Julian Lucas, Adam M. Phillippy, Alice B. Popejoy, Mobin Asri, Caryn Carson, Mark Chaisson, Xian Chang, Robert Cook‐Deegan, Adam L. Felsenfeld, Robert S. Fulton, Erik Garrison, Nanibaa’ A. Garrison, Tina A. Graves-Lindsay, Hanlee P. Ji, Eimear E. Kenny, Barbara A. Koenig, Daofeng Li, Tobias Marschall, Joshua F. McMichael, Adam M. Novak, Deepak Purushotham, Valérie Schneider, Baergen I. Schultz, Michael W. Smith, Heidi J. Sofia, Tsachy Weissman, Paul Flicek, Heng Li, Karen H. Miga, Benedict Paten, Erich D. Jarvis, Ira M. Hall, Evan E. Eichler, David Haussler - Nature 2022 cited by 565
- Toil enables reproducible, open source, big biomedical data analyses
Authors: John Vivian, Arjun A. Rao, Frank Austin Nothaft, Christopher Ketchum, Joel Armstrong, Adam M. Novak, Jacob Pfeil, Jake Narkizian, Alden Deran, Audrey Musselman-Brown, Hannes Schmidt, Peter Amstutz, Brian Craft, Mary J. Goldman, Kate R. Rosenbloom, Melissa Cline, Brian D. O’Connor, Megan Hanna, Chet Birger, W. James Kent, David A. Patterson, Anthony D. Joseph, Jingchun Zhu, Sasha Zaranek, Gad Getz, David Haussler, Benedict Paten - Nature Biotechnology 2017 cited by 1,444
- Progressive Cactus is a multiple-genome aligner for the thousand-genome era
Authors: Joel Armstrong, Glenn Hickey, Mark Diekhans, Ian T. Fiddes, Adam M. Novak, Alden Deran, Qi Fang, Duo Xie, Shaohong Feng, Josefin Stiller, Diane P. Genereux, Jeremy Johnson, Voichita D. Marinescu, Jessica Alföldi, Robert S. Harris, Kerstin Lindblad‐Toh, David Haussler, Elinor K. Karlsson, Erich D. Jarvis, Guojie Zhang, Benedict Paten - Nature 2020 cited by 676
- Initial sequencing and comparative analysis of the mouse genome
Authors: Asif T. Chinwalla, R Waterston, Kerstin Lindblad‐Toh, Ewan Birney, Jane Rogers, Josep F. Abril, Pankaj Agarwal, Richa Agarwala, Rachel Ainscough, Marina Alexandersson, Peter An, Stylianos E. Antonarakis, Joanne O. Nelson, Robert Baertsch, J. Bailey, K. F. Barlow, Stephan Beck, E. Berry, Bruce W. Birren, Toby Bloom, Peer Bork, Marc Botcherby, Nicolas Bray, Michael R. Brent, Daniel G. Brown, S.D.M. Brown, Carol J. Bult, John H. Burton, Jonathan A. Butler, R. Duncan Campbell, Piero Carninci, Simon Cawley, Francesca Chiaromonte, Asif Chinwalla, Deanna M. Church, Michèle Clamp, Christopher Clee, Francis S. Collins, Lisa L. Cook, Richard R. Copley, Alan Coulson, Olivier Couronne, James Cuff, Val Curwen, Tim Cutts, Mark Daly, Robert David, J. Davies, Kimberly D. Delehaunty, Justin Deri, Emmanouil T. Dermitzakis, Colin N. Dewey, Nicholas J. Dickens, Mark Diekhans, Sheila Dodge, Inna Dubchak, Diane M. Dunn, Sean R. Eddy, Laura Elnitski, Richard D. Emes, Pallavi Eswara, Eduardo Eyras, Adam L. Felsenfeld, Ginger Fewell, Paul Flicek, Karen Foley, Wayne N. Frankel, Lucinda A. Fulton, Robert S. Fulton, Terrence S. Furey, Diane Gage, Richard A. Gibbs, Gustavo Glusman, Sante Gnerre, Nick Goldman, Leo Goodstadt, Darren Grafham, Tina Graves, Eric D. Green, Simon G. Gregory, Roderic Guigó, Mark S. Guyer, Ross C. Hardison, David Haussler, Yoshihide Hayashizaki, LaDeana W. Hillier, James Cuff, Wratko Hlavina, Timothy R. Holzer, Fan Hsu, Axin Hua, Tim Hubbard, Adrienne Hunt, Ian J. Jackson, David B. Jaffe, L. Steven Johnson, Matthew C. Jones, Thomas A. Jones, Ann Joy, Michael Kamal and 123 more - Nature 2002 cited by 7,293
- Key Parameters of Tumor Epitope Immunogenicity Revealed Through a Consortium Approach Improve Neoantigen Prediction
Authors: Daniel K. Wells, Marit M. van Buuren, Kristen K. Dang, Vanessa M. Hubbard-Lucey, Kathleen C. F. Sheehan, Katie M. Campbell, Andrew Lamb, Jeffrey P. Ward, John Sidney, Ana-Belén Blázquez, Andrew J. Rech, Jesse M. Zaretsky, Begonya Comin-Anduix, Alphonsus H. C. Ng, William Chour, Thomas Yu, Hira Rizvi, Jia M. Chen, Patrice Manning, Gabriela Steiner, Xengie Doan, Aly A. Khan, Amit A. Lugade, Ana Mijalkovic Lazic, Angela Frentzen, Arbel D. Tadmor, Ariella Sasson, Arjun A. Rao, Baikang Pei, Barbara Schrörs, Beata Berent-Maoz, Beatriz M. Carreno, Bin Song, Bjoern Peters, Bo Li, Brandon W. Higgs, Brian J. Stevenson, Christian Iseli, Christopher A. Miller, Christopher Morehouse, Cornelis J.M. Melief, Cristina Puig-Saus, Daphne M. van Beek, David Balli, David Gfeller, David Haussler, Dirk Jäger, Eduardo Cortes, Ekaterina Esaulova, Elham Sherafat, Francisco Arcila, Gábor Bartha, Geng Liu, George Coukos, Guilhem Richard, Chang Han, Han Si, Inka Zörnig, Ioannis Xénarios, Ion Măndoiu, Irsan Kooi, James Conway, Jan H. Kessler, Jason Greenbaum, Jason Perera, Jason Harris, Jasreet Hundal, Jennifer Shelton, Jianmin Wang, Jiaqian Wang, Joel Greshock, Jonathon Blake, Joseph D. Szustakowski, Julia Kodysh, Juliet Forman, Lei Wei, Leo J. Lee, Lorenzo F. Fanchi, Maarten Slagter, Maren Lang, Markus S. Mueller, Martin Löwer, Mathias Vormehr, Maxim N. Artyomov, Michael Kuziora, Michael F. Princiotta, Michal Bassani‐Sternberg, Mignonette H. Macabali, Milica Kojicic, Naibo Yang, Nevena Ilic Raicevic, Nicolas Guex, Nicolas Robine, Niels Halama, Nikola Skundric, Ognjen Milićević, Pascal Gellert, Patrick Jongeneel, Pornpimol Charoentong, Pramod K. Srivastava and 45 more - Cell 2020 cited by 550
- Pangenomics enables genotyping of known structural variants in 5202 diverse genomes
Authors: Jouni Sirén, Jean Monlong, Xian Chang, Adam M. Novak, Jordan M. Eizenga, Charles Markello, Jonas A. Sibbesen, Glenn Hickey, Pi-Chuan Chang, Andrew Carroll, Namrata Gupta, Stacey Gabriel, Thomas W. Blackwell, Aakrosh Ratan, Kent D. Taylor, Stephen S. Rich, Jerome I. Rotter, David Haussler, Erik Garrison, Benedict Paten - Science 2021 cited by 412
- The UCSC Table Browser data retrieval tool
Authors: Donna Karolchik, Angela S. Hinrichs, Terrence S. Furey, Krishna M. Roskin, Charles W. Sugnet, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2003 cited by 2,533
- Earth BioGenome Project: Sequencing life for the future of life
Authors: Harris A. Lewin, Gene E. Robinson, W. John Kress, William J. Baker, Jonathan A. Coddington, Keith A. Crandall, Richard Durbin, Scott V. Edwards, Félix Forest, M. Thomas P. Gilbert, Melissa M. Goldstein, Igor V. Grigoriev, Kevin J. Hackett, David Haussler, Erich D. Jarvis, Warren E. Johnson, A.A.N. Patrinos, Stephen Richards, Juan Carlos Castilla-Rubio, Marie‐Anne Van Sluys, Pamela S. Soltis, Xun Xu, Huanming Yang, Guojie Zhang - National Academy of Sciences, Proceedings of the National Academy of Sciences 2018 cited by 1,079
- Pangenome graph construction from genome alignments with Minigraph-Cactus
Authors: Glenn Hickey, Jean Monlong, Jana Ebler, Adam M. Novak, Jordan M. Eizenga, Yan Gao, Haley Abel, Lucinda Antonacci-Fulton, Mobin Asri, Gunjan Baid, Carl Baker, Anastasiya Belyaeva, Konstantinos Billis, Guillaume Bourque, Silvia Buonaiuto, Andrew Carroll, Mark Chaisson, Pi-Chuan Chang, Xian Chang, Haoyu Cheng, Justin Chu, Sarah Cody, Vincenza Colonna, Daniel E. Cook, Robert Cook‐Deegan, Omar E. Cornejo, Mark Diekhans, Daniel Doerr, Peter Ebert, Jana Ebler, Evan E. Eichler, Susan Fairley, Olivier Fédrigo, Adam L. Felsenfeld, Xiaowen Feng, Christian Fischer, Paul Flicek, Giulio Formenti, Adam Frankish, Robert S. Fulton, Shilpa Garg, Erik Garrison, Nanibaa’ A. Garrison, Carlos García Girón, Richard E. Green, Cristian Groza, Andrea Guarracino, Leanne Haggerty, Ira M. Hall, William T. Harvey, Marina Haukness, David Haussler, Simon Heumos, Kendra Hoekzema, Thibaut Hourlier, Kerstin Howe, Miten Jain, Erich D. Jarvis, Hanlee P. Ji, Eimear E. Kenny, Barbara A. Koenig, Alexey Kolesnikov, Jan O. Korbel, Jennifer Kordosky, Sergey Koren, HoJoon Lee, Alexandra P. Lewis, Wen‐Wei Liao, Shuangjia Lu, Tsung-Yu Lu, Julian Lucas, Hugo Magalhães, Santiago Marco‐Sola, Pierre Marijon, Charles Markello, Tobias Marschall, Fergal J. Martin, Ann M. Mc Cartney, Jennifer McDaniel, Karen H. Miga, Matthew W. Mitchell, Jacquelyn Mountcastle, Katherine M. Munson, Moses Njagi Mwaniki, Maria Nattestad, Sergey Nurk, Hugh E. Olsen, Nathan D. Olson, Trevor Pesout, Adam M. Phillippy, Alice B. Popejoy, David Porubský, Pjotr Prins, Daniela Puiu, Mikko Rautiainen, Allison Regier, Arang Rhie, Samuel Sacco, Ashley D. Sanders, Valérie Schneider and 21 more - Nature Biotechnology 2023 cited by 306
- The UCSC genome browser and associated tools
Authors: Robert M. Kuhn, David Haussler, W. James Kent - Briefings in Bioinformatics, Briefings Bioinform. 2012 cited by 1,028
- Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution
Authors: Alex A. Pollen, Aparna Bhaduri, Madeline G. Andrews, Tomasz J. Nowakowski, Olivia S. Meyerson, Mohammed A. Mostajo-Radji, Elizabeth Di Lullo, Beatriz Alvarado, Melanie Bedolli, Max L. Dougherty, Ian T. Fiddes, Zev Kronenberg, Joe Shuga, Anne Leyrat, Jay West, Marina Bershteyn, Craig B. Lowe, Bryan J. Pavlovic, Sofie R. Salama, David Haussler, Evan E. Eichler, Arnold R. Kriegstein - Cell 2019 cited by 631
- GA4GH: International policies and standards for data sharing across genomic research and healthcare
Authors: Heidi L. Rehm, Angela Page, Lindsay Smith, Jeremy Adams, Gil Alterovitz, Lawrence Babb, Maxmillian P. Barkley, Michael Baudis, Michael J. S. Beauvais, Tim Beck, J. Beckmann, Sergi Beltrán, David L. Bernick, Alexander Bernier, James Bonfield, Tiffany Boughtwood, Guillaume Bourque, Sarion R. Bowers, Anthony J. Brookes, Michael Brudno, Matthew Brush, David Bujold, Tony Burdett, Orion J. Buske, Moran N. Cabili, Daniel Cameron, Robert J. Carroll, Esmeralda Casas-Silva, Debyani Chakravarty, Bimal P. Chaudhari, Shu Hui Chen, J. Michael Cherry, Justina Chung, Melissa Cline, Hayley Clissold, Robert Cook‐Deegan, Mélanie Courtot, Fiona Cunningham, Miro Cupak, Robert M. Davies, Danielle Denisko, Megan Doerr, Lena Dolman, Edward S. Dove, Lewis Jonathan Dursi, Stephanie O. M. Dyke, James A. Eddy, Karen Eilbeck, Kyle Ellrott, Susan Fairley, Khalid A. Fakhro, Helen V. Firth, Michael Fitzsimons, Marc Fiume, Paul Flicek, Ian Fore, Mallory Freeberg, Robert R. Freimuth, Lauren A. Fromont, Jonathan Fuerth, Clara Gaff, Weiniu Gan, Elena M. Ghanaim, David Glazer, Robert C. Green, Malachi Griffith, Obi L. Griffith, Robert L. Grossman, Tudor Groza, Jaime M. Guidry Auvil, Roderic Guigó, Dipayan Gupta, Melissa Haendel, Ada Hamosh, David Hansen, Reece K. Hart, Dean M. Hartley, David Haussler, Rachele Hendricks‐Sturrup, Calvin Wai-Loon Ho, Ashley E. Hobb, Michael M. Hoffman, Oliver Hofmann, Petr Holub, Jacob Shujui Hsu, Jean‐Pierre Hubaux, Sarah Hunt, Ammar Husami, Julius O.B. Jacobsen, Saumya S. Jamuar, Elizabeth Janes, Francis Jeanson, Aina Jené, Amber L. Johns, Yann Joly, Steven J.M. Jones, Alexander Kanitz, Yoshihiro Kato, Thomas Keane, Kristina Kekesi-Lafrance and 102 more - Cell Genomics 2021 cited by 294
- The Earth BioGenome Project 2020: Starting the clock
Authors: Harris A. Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L. Allende, John M. Archibald, Miklós Bálint, Katharine Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark Blaxter, Jing Cai, Nicolette Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu‐Miaw Chaw, Lei Chen, Anna K. Childers, Jonathan A. Coddington, Dalia A. Conde, Montserrat Corominas, Keith A. Crandall, Andrew J. Crawford, Federica Di-Palma, Richard Durbin, ThankGod E. Ebenezer, Scott V. Edwards, Olivier Fédrigo, Paul Flicek, Giulio Formenti, Richard A. Gibbs, M. Thomas P. Gilbert, Melissa M. Goldstein, Jennifer A. Marshall Graves, Henry T. Greely, Igor V. Grigoriev, Kevin J. Hackett, Neil Hall, David Haussler, Kristofer M. Helgen, Carolyn J. Hogg, Sachiko Isobe, Kjetill S. Jakobsen, Axel Janke, Erich D. Jarvis, Warren E. Johnson, Steven J.M. Jones, Elinor K. Karlsson, Paul Kersey, Jin‐Hyoung Kim, W. John Kress, Shigehiro Kuraku, Mara Lawniczak, Jim Leebens‐Mack, Xueyan Li, Kerstin Lindblad‐Toh, Xin Liu, Jose V. Lopez, Tomàs Marquès‐Bonet, Sophie Mazard, Jonna A. K. Mazet, Camila J. Mazzoni, Eugene W. Myers, Rachel J. O’Neill, Sadye Paez, Hyun Park, Gene E. Robinson, Cristina Roquet, Oliver A. Ryder, Jamal S. M. Sabir, H. Bradley Shaffer, Timothy M. Shank, Jacob S. Sherkow, Pamela S. Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano‐Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L. Wilson, Xun Xu, Huanming Yang, Anne D. Yoder, Guojie Zhang - National Academy of Sciences, Proceedings of the National Academy of Sciences 2022 cited by 365
- The UCSC Genome Browser database: 2024 update
Authors: Brian J. Raney, Galt P Barber, Anna Benet‐Pagès, Jonathan D. Casper, Hiram Clawson, Melissa Cline, Mark Diekhans, Clayton M. Fischer, Jairo Navarro Gonzalez, Glenn Hickey, Angie S. Hinrichs, Robert M. Kuhn, Brian T. Lee, Christopher M. Lee, Philippe Le Mercier, Karen H. Miga, Luis R Nassar, Parisa Nejad, Benedict Paten, Gerardo Perez, Daniel Schmelter, Matthew L Speir, Brittney Wick, Ann S. Zweig, David Haussler, W. James Kent, Maximilian Haeussler - Nucleic Acids Research 2023 cited by 358
- Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
Authors: Kishwar Shafin, Trevor Pesout, Ryan Lorig-Roach, Marina Haukness, Hugh E. Olsen, Colleen M. Bosworth, Joel Armstrong, Kristof Tigyi, Nicholas Maurer, Sergey Koren, Fritz J. Sedlazeck, Tobias Marschall, Simon Mayes, Vânia Costa, Justin M. Zook, Kelvin J. Liu, Duncan Kilburn, Melanie Sorensen, Katherine M. Munson, Mitchell R. Vollger, Jean Monlong, Erik Garrison, Evan E. Eichler, Sofie R. Salama, David Haussler, Richard E. Green, Mark Akeson, Adam M. Phillippy, Karen H. Miga, P. Carnevali, Miten Jain, Benedict Paten - Nature Biotechnology 2020 cited by 654
